FFCP PHASE1:Mm9::chr11:97436524..97436550,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=56013|HGNC=|MCL_coexpression_id=1|UniProt=B1AQX9|association_with_transcript=0bp_to_ENSMUST00000107596,ENSMUST00000142123_5end|description=CAGE_peak_4_at_Srcin1_5end|id=chr11:97436524..97436550,-|ontology_enrichment_celltype=CL:0000540!1.65e-16!33;CL:0000047!1.65e-16!33;CL:0000031!1.65e-16!33;CL:0000404!1.65e-16!33;CL:0000117!2.17e-15!23;CL:0000337!2.17e-15!23;CL:0000221!1.46e-13!44;CL:0000133!1.46e-13!44;CL:0002319!4.31e-13!43;CL:0000393!1.06e-11!39;CL:0000211!1.06e-11!39;CL:0000055!3.65e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.14e-23,23;CL:0000337,3.14e-23,23;CL:0000540,8.97e-21,33;CL:0000047,8.97e-21,33;CL:0000031,8.97e-21,33;CL:0000404,8.97e-21,33;CL:0000393,3.62e-16,39;CL:0000211,3.62e-16,39;CL:0000221,1.51e-15,44;CL:0000133,1.51e-15,44;CL:0002319,7.25e-15,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.03e-33!73;UBERON:0005743!2.03e-33!73;UBERON:0000073!5.13e-33!75;UBERON:0001016!5.13e-33!75;UBERON:0004121!3.23e-32!102;UBERON:0000924!3.23e-32!102;UBERON:0006601!3.23e-32!102;UBERON:0000033!1.43e-28!63;UBERON:0002346!7.64e-28!71;UBERON:0003075!7.64e-28!71;UBERON:0007284!7.64e-28!71;UBERON:0001049!1.96e-27!52;UBERON:0005068!1.96e-27!52;UBERON:0006241!1.96e-27!52;UBERON:0007135!1.96e-27!52;UBERON:0000955!3.01e-26!50;UBERON:0006238!3.01e-26!50;UBERON:0002616!1.61e-25!49;UBERON:0003056!1.31e-23!49;UBERON:0003080!2.77e-21!40;UBERON:0002020!2.95e-21!34;UBERON:0002780!1.20e-20!39;UBERON:0001890!1.20e-20!39;UBERON:0006240!1.20e-20!39;UBERON:0002791!8.53e-18!29;UBERON:0003528!8.53e-18!29;UBERON:0001893!8.53e-18!29;UBERON:0007811!9.01e-14!86;UBERON:0000153!1.04e-12!94;UBERON:0000956!1.29e-12!21;UBERON:0001869!1.29e-12!21;UBERON:0000203!1.29e-12!21;UBERON:0002619!2.83e-10!17;UBERON:0002021!4.76e-09!10;UBERON:0000411!4.76e-09!10;UBERON:0001950!4.76e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.88e-39,73;UBERON:0001016,3.21e-37,75;UBERON:0000073,5.83e-36,54;UBERON:0001049,2.54e-33,52;UBERON:0005068,2.54e-33,52;UBERON:0006241,2.54e-33,52;UBERON:0007135,2.54e-33,52;UBERON:0004121,5.88e-33,95;UBERON:0000924,5.88e-33,95;UBERON:0006601,5.88e-33,95;UBERON:0002020,4.65e-32,34;UBERON:0002346,3.99e-31,64;UBERON:0003075,3.99e-31,64;UBERON:0007284,3.99e-31,64;UBERON:0000955,4.51e-28,47;UBERON:0006238,4.51e-28,47;UBERON:0002616,5.05e-27,46;UBERON:0010371,1.04e-26,73;UBERON:0003528,1.26e-26,29;UBERON:0002791,1.26e-26,29;UBERON:0001893,1.26e-26,29;UBERON:0003056,2.06e-24,49;UBERON:0003080,2.24e-24,40;UBERON:0002780,1.97e-23,39;UBERON:0001890,1.97e-23,39;UBERON:0006240,1.97e-23,39;UBERON:0000956,1.66e-18,21;UBERON:0001869,1.66e-18,21;UBERON:0000203,1.66e-18,21;UBERON:0010314,5.27e-18,92;UBERON:0002619,7.63e-15,17;UBERON:0002021,2.74e-13,10;UBERON:0000411,2.74e-13,10;UBERON:0001950,2.74e-13,10;UBERON:0002420,3.50e-09,8;UBERON:0007245,3.50e-09,8;UBERON:0010009,3.50e-09,8;UBERON:0010011,3.50e-09,8;UBERON:0000454,3.50e-09,8;UBERON:0003076,3.75e-09,12;UBERON:0003057,3.75e-09,12;UBERON:0000025,6.23e-08,114;UBERON:0002240,2.67e-07,6;UBERON:0005174,2.67e-07,6;UBERON:0001137,2.67e-07,6;UBERON:0004111,3.37e-07,122|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,6.47412674750713,4.7609188134483,6.33831403506179,0,0,0,0,0,0.299600110518405,1.15265491596466,5.08079100311541,3.64516033495565,3.36519938162211,11.1403883917483,7.06779331045163,2.9397791811589,3.64212789869298,2.75765635983006,15.4162233399144,6.2566795661742,8.60196586234964,6.3305418110493,6.31264740856627,8.33461392890816,6.42120897703176,2.25105044012672,6.26472815884921,7.36571463684169,4.55589378557129,4.28718725398191,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,1.83096445709685,0,0,0,0,0,0,0.5709193985953,0,0.29688427812965,0,0,0.230615497256059,0.452167921657868,0,0.125666591329675,0,0,0,0,0,0,0,16.9812862266697,12.3573557019938,0,0,0,0,5.54225365797844,7.32000964509802,6.65968066198181,8.51739168942155,10.2286182932132,4.77912502486988,6.97637431191358,0.101839363850316,0.124406970610093,0,0.210441855886474,0.130120442962704,1.37941262660084,0.900310649026746,0.90422890701429,1.2246569847239,1.15302348256365,1.59292931751539,1.81092359517311,0,0,0.351902248327898,0,0.556094498451196,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,7.78072809687271,6.07137213037778,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0.432276099749388,0,0.189667900953082,0.456994050438915,2.25415471346161,0.407302655690628,0,0.0701358198903186,0.252946148497029,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0,0,0.339490171550376,0.234690248288502,0,0,0.195133647857799,0,0,0.159454768657487,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0,6.26147300952389,5.50894926983355,0,0,0.315508219416257,0.390438744296638,0.861693590931196,1.19484398976276,1.55959071857676,3.11384183867716,0,1.16902343164525,1.18586333383957,6.42642632843614,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0.680879211507576,1.08036656418786,0.905510786479282,0.428674070063185,0.532020700926821,0.713475270408282,0.822745103010605,1.2178597964584,0,0,0,0.32977250588296,0.645857706783622,0.422190474497091,0.119372344003136,0.164140899745061,0,4.26478194624172,0,0.206386867963223,0,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.324016022465404,0.418176592028937,0.218362563746178,0,0.247960367176008,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,19.7663144915973,10.5874804396651,6.87474616127276,8.42080593484069,13.0165678756422,9.82012066606611,8.77529250301348,9.00642406448441,8.60970577069989,13.9795284172991,0.415149390336707,0.798049746802062,0.853668028770671,1.45864030240976,0.838452650511929,1.2869045591501,0.666740183404846,1.64828045791115,0.962757628775446,1.01078884705519,0.50695859978048,0.943131706930381,1.68554713445788,1.21647789569252,1.20614484806788,0.952587382566147,1.62238056322798,1.54327376370964,0.824171801606613,1.47198920134397,1.71434626192708,0.887379030796687,1.1921809497366,1.16277133305863,0.941093804153306,1.52306294205018,0.365855945745545,0.263069711437843,0.950628796921032,3.36685362994643,1.06771516311757,1.0835493061312,1.63692417267876,1.08455788830176,1.15743966588685,1.99848462350357,1.40358965067245,2.36358159453128,0.956441660344217,0.661774257358546,0.231867835620421|short_description=p4@Srcin1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:56013 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B1AQX9 | |||
|association_with_transcript=0bp_to_ENSMUST00000107596,ENSMUST00000142123_5end | |||
|cluster_id=chr11:97436524..97436550,- | |||
|description=CAGE_peak_4_at_Srcin1_5end | |||
|id=chr11:97436524..97436550,- | |||
|ontology_enrichment_celltype=CL:0000540!1.65e-16!33;CL:0000047!1.65e-16!33;CL:0000031!1.65e-16!33;CL:0000404!1.65e-16!33;CL:0000117!2.17e-15!23;CL:0000337!2.17e-15!23;CL:0000221!1.46e-13!44;CL:0000133!1.46e-13!44;CL:0002319!4.31e-13!43;CL:0000393!1.06e-11!39;CL:0000211!1.06e-11!39;CL:0000055!3.65e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.14e-23,23;CL:0000337,3.14e-23,23;CL:0000540,8.97e-21,33;CL:0000047,8.97e-21,33;CL:0000031,8.97e-21,33;CL:0000404,8.97e-21,33;CL:0000393,3.62e-16,39;CL:0000211,3.62e-16,39;CL:0000221,1.51e-15,44;CL:0000133,1.51e-15,44;CL:0002319,7.25e-15,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.03e-33!73;UBERON:0005743!2.03e-33!73;UBERON:0000073!5.13e-33!75;UBERON:0001016!5.13e-33!75;UBERON:0004121!3.23e-32!102;UBERON:0000924!3.23e-32!102;UBERON:0006601!3.23e-32!102;UBERON:0000033!1.43e-28!63;UBERON:0002346!7.64e-28!71;UBERON:0003075!7.64e-28!71;UBERON:0007284!7.64e-28!71;UBERON:0001049!1.96e-27!52;UBERON:0005068!1.96e-27!52;UBERON:0006241!1.96e-27!52;UBERON:0007135!1.96e-27!52;UBERON:0000955!3.01e-26!50;UBERON:0006238!3.01e-26!50;UBERON:0002616!1.61e-25!49;UBERON:0003056!1.31e-23!49;UBERON:0003080!2.77e-21!40;UBERON:0002020!2.95e-21!34;UBERON:0002780!1.20e-20!39;UBERON:0001890!1.20e-20!39;UBERON:0006240!1.20e-20!39;UBERON:0002791!8.53e-18!29;UBERON:0003528!8.53e-18!29;UBERON:0001893!8.53e-18!29;UBERON:0007811!9.01e-14!86;UBERON:0000153!1.04e-12!94;UBERON:0000956!1.29e-12!21;UBERON:0001869!1.29e-12!21;UBERON:0000203!1.29e-12!21;UBERON:0002619!2.83e-10!17;UBERON:0002021!4.76e-09!10;UBERON:0000411!4.76e-09!10;UBERON:0001950!4.76e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.88e-39,73;UBERON:0001016,3.21e-37,75;UBERON:0000073,5.83e-36,54;UBERON:0001049,2.54e-33,52;UBERON:0005068,2.54e-33,52;UBERON:0006241,2.54e-33,52;UBERON:0007135,2.54e-33,52;UBERON:0004121,5.88e-33,95;UBERON:0000924,5.88e-33,95;UBERON:0006601,5.88e-33,95;UBERON:0002020,4.65e-32,34;UBERON:0002346,3.99e-31,64;UBERON:0003075,3.99e-31,64;UBERON:0007284,3.99e-31,64;UBERON:0000955,4.51e-28,47;UBERON:0006238,4.51e-28,47;UBERON:0002616,5.05e-27,46;UBERON:0010371,1.04e-26,73;UBERON:0003528,1.26e-26,29;UBERON:0002791,1.26e-26,29;UBERON:0001893,1.26e-26,29;UBERON:0003056,2.06e-24,49;UBERON:0003080,2.24e-24,40;UBERON:0002780,1.97e-23,39;UBERON:0001890,1.97e-23,39;UBERON:0006240,1.97e-23,39;UBERON:0000956,1.66e-18,21;UBERON:0001869,1.66e-18,21;UBERON:0000203,1.66e-18,21;UBERON:0010314,5.27e-18,92;UBERON:0002619,7.63e-15,17;UBERON:0002021,2.74e-13,10;UBERON:0000411,2.74e-13,10;UBERON:0001950,2.74e-13,10;UBERON:0002420,3.50e-09,8;UBERON:0007245,3.50e-09,8;UBERON:0010009,3.50e-09,8;UBERON:0010011,3.50e-09,8;UBERON:0000454,3.50e-09,8;UBERON:0003076,3.75e-09,12;UBERON:0003057,3.75e-09,12;UBERON:0000025,6.23e-08,114;UBERON:0002240,2.67e-07,6;UBERON:0005174,2.67e-07,6;UBERON:0001137,2.67e-07,6;UBERON:0004111,3.37e-07,122 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,6.47412674750713,4.7609188134483,6.33831403506179,0,0,0,0,0,0.299600110518405,1.15265491596466,5.08079100311541,3.64516033495565,3.36519938162211,11.1403883917483,7.06779331045163,2.9397791811589,3.64212789869298,2.75765635983006,15.4162233399144,6.2566795661742,8.60196586234964,6.3305418110493,6.31264740856627,8.33461392890816,6.42120897703176,2.25105044012672,6.26472815884921,7.36571463684169,4.55589378557129,4.28718725398191,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,1.83096445709685,0,0,0,0,0,0,0.5709193985953,0,0.29688427812965,0,0,0.230615497256059,0.452167921657868,0,0.125666591329675,0,0,0,0,0,0,0,16.9812862266697,12.3573557019938,0,0,0,0,5.54225365797844,7.32000964509802,6.65968066198181,8.51739168942155,10.2286182932132,4.77912502486988,6.97637431191358,0.101839363850316,0.124406970610093,0,0.210441855886474,0.130120442962704,1.37941262660084,0.900310649026746,0.90422890701429,1.2246569847239,1.15302348256365,1.59292931751539,1.81092359517311,0,0,0.351902248327898,0,0.556094498451196,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,7.78072809687271,6.07137213037778,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0.432276099749388,0,0.189667900953082,0.456994050438915,2.25415471346161,0.407302655690628,0,0.0701358198903186,0.252946148497029,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0,0,0.339490171550376,0.234690248288502,0,0,0.195133647857799,0,0,0.159454768657487,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0,6.26147300952389,5.50894926983355,0,0,0.315508219416257,0.390438744296638,0.861693590931196,1.19484398976276,1.55959071857676,3.11384183867716,0,1.16902343164525,1.18586333383957,6.42642632843614,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0.680879211507576,1.08036656418786,0.905510786479282,0.428674070063185,0.532020700926821,0.713475270408282,0.822745103010605,1.2178597964584,0,0,0,0.32977250588296,0.645857706783622,0.422190474497091,0.119372344003136,0.164140899745061,0,4.26478194624172,0,0.206386867963223,0,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.324016022465404,0.418176592028937,0.218362563746178,0,0.247960367176008,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,19.7663144915973,10.5874804396651,6.87474616127276,8.42080593484069,13.0165678756422,9.82012066606611,8.77529250301348,9.00642406448441,8.60970577069989,13.9795284172991,0.415149390336707,0.798049746802062,0.853668028770671,1.45864030240976,0.838452650511929,1.2869045591501,0.666740183404846,1.64828045791115,0.962757628775446,1.01078884705519,0.50695859978048,0.943131706930381,1.68554713445788,1.21647789569252,1.20614484806788,0.952587382566147,1.62238056322798,1.54327376370964,0.824171801606613,1.47198920134397,1.71434626192708,0.887379030796687,1.1921809497366,1.16277133305863,0.941093804153306,1.52306294205018,0.365855945745545,0.263069711437843,0.950628796921032,3.36685362994643,1.06771516311757,1.0835493061312,1.63692417267876,1.08455788830176,1.15743966588685,1.99848462350357,1.40358965067245,2.36358159453128,0.956441660344217,0.661774257358546,0.231867835620421 | |||
|short_description=p4@Srcin1 | |||
}} |
Revision as of 11:34, 4 August 2015
Short description: | p4@Srcin1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Srcin1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000107596, ENSMUST00000142123_5end |
EntrezGene: | 56013 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.14e-23 | 23 |
neuroblast (sensu Vertebrata) | 3.14e-23 | 23 |
neuron | 8.97e-21 | 33 |
neuronal stem cell | 8.97e-21 | 33 |
neuroblast | 8.97e-21 | 33 |
electrically signaling cell | 8.97e-21 | 33 |
electrically responsive cell | 3.62e-16 | 39 |
electrically active cell | 3.62e-16 | 39 |
ectodermal cell | 1.51e-15 | 44 |
neurectodermal cell | 1.51e-15 | 44 |
neural cell | 7.25e-15 | 43 |