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FFCP PHASE1:Mm9::chr19:5894100..5894155,-: Difference between revisions

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{{FFCP|EntrezGene=332359|HGNC=|UniProt=Q7TM95|association_with_transcript=0bp_to_ENSMUST00000055911,NM_198634,uc008gft.1,uc008gfu.1_5end|description=CAGE_peak_1_at_Tigd3_5end|id=chr19:5894100..5894155,-|ontology_enrichment_celltype=CL:0000117!4.32e-10!23;CL:0000337!4.32e-10!23;CL:0000540!7.70e-07!33;CL:0000047!7.70e-07!33;CL:0000031!7.70e-07!33;CL:0000404!7.70e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.02e-10,23;CL:0000337,2.02e-10,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.10e-11!52;UBERON:0005068!1.10e-11!52;UBERON:0006241!1.10e-11!52;UBERON:0007135!1.10e-11!52;UBERON:0002346!6.86e-11!71;UBERON:0003075!6.86e-11!71;UBERON:0007284!6.86e-11!71;UBERON:0001017!1.18e-10!73;UBERON:0005743!1.18e-10!73;UBERON:0003056!1.23e-10!49;UBERON:0000955!6.34e-10!50;UBERON:0006238!6.34e-10!50;UBERON:0002020!7.53e-10!34;UBERON:0000073!8.44e-10!75;UBERON:0001016!8.44e-10!75;UBERON:0000033!1.14e-09!63;UBERON:0003080!1.20e-09!40;UBERON:0002616!1.46e-09!49;UBERON:0002780!2.67e-09!39;UBERON:0001890!2.67e-09!39;UBERON:0006240!2.67e-09!39;UBERON:0002791!6.04e-08!29;UBERON:0003528!6.04e-08!29;UBERON:0001893!6.04e-08!29;UBERON:0000153!6.58e-08!94;UBERON:0004121!1.63e-07!102;UBERON:0000924!1.63e-07!102;UBERON:0006601!1.63e-07!102;UBERON:0007811!1.81e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.02e-12,64;UBERON:0003075,2.02e-12,64;UBERON:0007284,2.02e-12,64;UBERON:0001049,6.02e-12,52;UBERON:0005068,6.02e-12,52;UBERON:0006241,6.02e-12,52;UBERON:0007135,6.02e-12,52;UBERON:0000073,1.04e-11,54;UBERON:0003056,6.40e-11,49;UBERON:0000955,3.04e-10,47;UBERON:0006238,3.04e-10,47;UBERON:0001017,4.00e-10,73;UBERON:0002616,7.45e-10,46;UBERON:0002020,8.23e-10,34;UBERON:0003080,1.75e-09,40;UBERON:0001016,2.97e-09,75;UBERON:0002780,4.10e-09,39;UBERON:0001890,4.10e-09,39;UBERON:0006240,4.10e-09,39;UBERON:0010371,3.56e-08,73;UBERON:0003528,8.66e-08,29;UBERON:0002791,8.66e-08,29;UBERON:0001893,8.66e-08,29;UBERON:0004121,7.83e-07,95;UBERON:0000924,7.83e-07,95;UBERON:0006601,7.83e-07,95|phase1_expression=0.960893082628764,2.79180326111489,2.72999543633722,6.95667686005709,6.01074875935617,0.33575854382378,0.233612640595526,0.129123323441576,0.422366166455,0.70219357896598,0,0,0.342401459862411,0.0874204024189974,3.66420737997229,5.4668322195253,6.29605690315332,0.315462165358238,0.137114433605739,0.42438965179803,0.935476191661768,0.198581902401771,0.522399578277871,1.11994695955385,0.45881856213434,3.44539178469012,0.430761996159075,0.430942465371778,0.380046838912748,1.51218077855958,0.443461021310609,6.98533740805594,4.92051830067656,0,0.866554859253824,0.664938581433969,1.02084678131185,0.418531630736908,0.7813353445238,2.09409497589519,0,1.36609096991689,0.971020706062307,0.377690453926732,0,0.183546752161682,0,2.39827672018491,0.878744730937887,0.58328969722285,0.979904951377538,0,0.671130424230945,0,0.336093799142464,0.257259436035947,0,0,4.85559506063035,6.87688273053643,8.23980824558033,0.338844532069132,0,0,0,1.4209602298922,1.19840044207362,2.68952813725088,4.97710139080693,5.26523159493594,8.62332341540666,2.28520787523043,2.42955395046775,8.08439274818697,7.66763768145891,6.43453150627015,1.10115880999389,1.91531007127782,1.38245879930619,5.80299666012853,6.67859798297591,9.37644067002168,2.79182999001381,2.8138130501584,0.916789486660861,3.83017161115768,3.98640706237488,5.40558392893372,0.075726193333184,0.755715601067855,1.73918693221007,0.860423876981386,0,0,0,0,0.280888840263504,0.340860645156116,0,0.35333957451034,0.845060518660083,0,2.54805239706646,0,0,0,0,0.34255163915718,0.517875767294343,1.03909497345377,0.867426633830679,1.21786191324856,2.7673859670727,1.05505848386836,1.41106448562846,0.376999773989026,0.494389935468748,0.144599356919912,1.76922110389975,1.13236794963186,2.87093973998512,1.93950101254089,0,4.09893115816166,3.77004072264219,3.32094171771169,0.359445373517761,0.599902730993408,0.127070227073065,2.84602214869163,1.83000241127451,6.78533501409468,1.56441888173049,2.30143911597297,1.45451631191692,2.59586020908412,1.73126918545538,1.49288364732112,0,0,1.56144531555244,3.21862946206862,3.24111833649629,2.71268672104287,4.49040894398764,4.09963904911519,3.74806898238915,0.258703370739016,3.66465587985832,2.45837904218165,3.16712023495108,1.31517439456545,1.94633074457919,1.0447564995665,0.823128545631774,2.7864797354589,0,0.257347907114715,0.568326998791185,0,2.11073453982987,1.44049649168812,0.710234206755631,0.787056926989615,1.69693824176116,0.930135779001631,1.07309360559848,0.233530684734339,1.15191894939436,0.656669856316381,0.810688095458557,0.584799949701329,0.658650345873152,0.671032093801859,1.26173969138476,4.6307075570678,6.27795687669216,3.17340679996253,1.91959425481711,1.16118335930219,1.67527699718721,1.81515172161008,1.33426826306922,1.71203063501303,2.37264530772256,0.823494773620054,0.251335208800269,0.397912944082302,1.16978452271472,0.898819408654221,2.37751854862164,2.38969527905241,1.51734320762465,1.3709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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:332359
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q7TM95
|association_with_transcript=0bp_to_ENSMUST00000055911,NM_198634,uc008gft.1,uc008gfu.1_5end
|cluster_id=chr19:5894100..5894155,-
|description=CAGE_peak_1_at_Tigd3_5end
|id=chr19:5894100..5894155,-
|ontology_enrichment_celltype=CL:0000117!4.32e-10!23;CL:0000337!4.32e-10!23;CL:0000540!7.70e-07!33;CL:0000047!7.70e-07!33;CL:0000031!7.70e-07!33;CL:0000404!7.70e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.02e-10,23;CL:0000337,2.02e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.10e-11!52;UBERON:0005068!1.10e-11!52;UBERON:0006241!1.10e-11!52;UBERON:0007135!1.10e-11!52;UBERON:0002346!6.86e-11!71;UBERON:0003075!6.86e-11!71;UBERON:0007284!6.86e-11!71;UBERON:0001017!1.18e-10!73;UBERON:0005743!1.18e-10!73;UBERON:0003056!1.23e-10!49;UBERON:0000955!6.34e-10!50;UBERON:0006238!6.34e-10!50;UBERON:0002020!7.53e-10!34;UBERON:0000073!8.44e-10!75;UBERON:0001016!8.44e-10!75;UBERON:0000033!1.14e-09!63;UBERON:0003080!1.20e-09!40;UBERON:0002616!1.46e-09!49;UBERON:0002780!2.67e-09!39;UBERON:0001890!2.67e-09!39;UBERON:0006240!2.67e-09!39;UBERON:0002791!6.04e-08!29;UBERON:0003528!6.04e-08!29;UBERON:0001893!6.04e-08!29;UBERON:0000153!6.58e-08!94;UBERON:0004121!1.63e-07!102;UBERON:0000924!1.63e-07!102;UBERON:0006601!1.63e-07!102;UBERON:0007811!1.81e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.02e-12,64;UBERON:0003075,2.02e-12,64;UBERON:0007284,2.02e-12,64;UBERON:0001049,6.02e-12,52;UBERON:0005068,6.02e-12,52;UBERON:0006241,6.02e-12,52;UBERON:0007135,6.02e-12,52;UBERON:0000073,1.04e-11,54;UBERON:0003056,6.40e-11,49;UBERON:0000955,3.04e-10,47;UBERON:0006238,3.04e-10,47;UBERON:0001017,4.00e-10,73;UBERON:0002616,7.45e-10,46;UBERON:0002020,8.23e-10,34;UBERON:0003080,1.75e-09,40;UBERON:0001016,2.97e-09,75;UBERON:0002780,4.10e-09,39;UBERON:0001890,4.10e-09,39;UBERON:0006240,4.10e-09,39;UBERON:0010371,3.56e-08,73;UBERON:0003528,8.66e-08,29;UBERON:0002791,8.66e-08,29;UBERON:0001893,8.66e-08,29;UBERON:0004121,7.83e-07,95;UBERON:0000924,7.83e-07,95;UBERON:0006601,7.83e-07,95
|phase1_expression=0.960893082628764,2.79180326111489,2.72999543633722,6.95667686005709,6.01074875935617,0.33575854382378,0.233612640595526,0.129123323441576,0.422366166455,0.70219357896598,0,0,0.342401459862411,0.0874204024189974,3.66420737997229,5.4668322195253,6.29605690315332,0.315462165358238,0.137114433605739,0.42438965179803,0.935476191661768,0.198581902401771,0.522399578277871,1.11994695955385,0.45881856213434,3.44539178469012,0.430761996159075,0.430942465371778,0.380046838912748,1.51218077855958,0.443461021310609,6.98533740805594,4.92051830067656,0,0.866554859253824,0.664938581433969,1.02084678131185,0.418531630736908,0.7813353445238,2.09409497589519,0,1.36609096991689,0.971020706062307,0.377690453926732,0,0.183546752161682,0,2.39827672018491,0.878744730937887,0.58328969722285,0.979904951377538,0,0.671130424230945,0,0.336093799142464,0.257259436035947,0,0,4.85559506063035,6.87688273053643,8.23980824558033,0.338844532069132,0,0,0,1.4209602298922,1.19840044207362,2.68952813725088,4.97710139080693,5.26523159493594,8.62332341540666,2.28520787523043,2.42955395046775,8.08439274818697,7.66763768145891,6.43453150627015,1.10115880999389,1.91531007127782,1.38245879930619,5.80299666012853,6.67859798297591,9.37644067002168,2.79182999001381,2.8138130501584,0.916789486660861,3.83017161115768,3.98640706237488,5.40558392893372,0.075726193333184,0.755715601067855,1.73918693221007,0.860423876981386,0,0,0,0,0.280888840263504,0.340860645156116,0,0.35333957451034,0.845060518660083,0,2.54805239706646,0,0,0,0,0.34255163915718,0.517875767294343,1.03909497345377,0.867426633830679,1.21786191324856,2.7673859670727,1.05505848386836,1.41106448562846,0.376999773989026,0.494389935468748,0.144599356919912,1.76922110389975,1.13236794963186,2.87093973998512,1.93950101254089,0,4.09893115816166,3.77004072264219,3.32094171771169,0.359445373517761,0.599902730993408,0.127070227073065,2.84602214869163,1.83000241127451,6.78533501409468,1.56441888173049,2.30143911597297,1.45451631191692,2.59586020908412,1.73126918545538,1.49288364732112,0,0,1.56144531555244,3.21862946206862,3.24111833649629,2.71268672104287,4.49040894398764,4.09963904911519,3.74806898238915,0.258703370739016,3.66465587985832,2.45837904218165,3.16712023495108,1.31517439456545,1.94633074457919,1.0447564995665,0.823128545631774,2.7864797354589,0,0.257347907114715,0.568326998791185,0,2.11073453982987,1.44049649168812,0.710234206755631,0.787056926989615,1.69693824176116,0.930135779001631,1.07309360559848,0.233530684734339,1.15191894939436,0.656669856316381,0.810688095458557,0.584799949701329,0.658650345873152,0.671032093801859,1.26173969138476,4.6307075570678,6.27795687669216,3.17340679996253,1.91959425481711,1.16118335930219,1.67527699718721,1.81515172161008,1.33426826306922,1.71203063501303,2.37264530772256,0.823494773620054,0.251335208800269,0.397912944082302,1.16978452271472,0.898819408654221,2.37751854862164,2.38969527905241,1.51734320762465,1.37098215131675,2.25415471346161,1.01825663922657,1.55161989734101,1.40271639780637,1.39120381673366,0.590440591918409,0.31399745568275,0.493588655687202,0.296452627087149,3.33690211432188,2.35870794135844,2.47348323623339,3.04290182082754,3.37648023653384,4.58326533206556,0.863088412352432,1.13494658742525,1.37280706594041,0,0.744281895337007,0.624075346229121,0.505157755894224,0.179397413521912,0,0,1.70542270593436,1.14075483509418,1.35796068620151,0.938760993154008,1.50755631697634,0.952174563544055,0.780534591431195,1.89162172927429,1.10732344824387,1.43509291791738,0.655453258862952,0.690739927463582,1.15719246865209,0,0,0,0.275936746304732,1.28440471990234,1.40654023910644,1.14754461763673,0.504941854408746,0.315508219416257,0.780877488593277,1.72338718186239,0.955875191810208,1.33679204449436,0.566153061577665,1.61924280669958,2.04579100537918,0.395287777946524,2.89189184779626,0.567760340833074,1.24645922567079,0.651547837414304,0.329940245945071,0,2.18502572539483,0.906970670894253,0.943025398779491,0.295301892880773,0,1.80899805217755,0.363533729477506,1.42598951353889,0.316036757935816,0,0,0.680879211507576,3.78128297465751,2.71653235943784,2.14337035031592,1.41872186913819,2.85390108163313,2.79733335023606,1.8267896946876,0.23467170806371,0.21183207086382,0,0.98931751764888,0.807322133479528,0.904693873922338,0.835606408021955,0.820704498725306,4.08073171281791,1.66882771809459,4.27177201994632,2.06386867963222,2.77791791054568,5.08594833912666,6.42462870288818,5.0331198105435,0.339956859987711,0.419854356970974,0.552799895217695,0,1.26534397432454,1.42323626988794,1.29606408986162,1.88179466413022,0.87345025498471,1.21377911746339,1.1571483801547,0,0.259229946583586,0.621339313086926,1.69107881605257,1.94371509857172,1.98550188548517,1.55560950675238,2.58319646955462,1.85851738039856,0.938857909166032,1.95306577265925,3.56521771047417,5.07326653734613,2.88030006257865,0.632022241256357,2.8381530140623,2.46506297195585,1.42912905275575,2.14832034800978,1.98681354781265,3.00488623799922,1.32920574457119,1.61546319917036,2.59103142626999,1.61321896218945,1.65678397257579,1.44317762460494,1.28564592399726,0.453460767230423,0.665957860122194,0.538283139656854,0.503653849092235,0.386379188064381,0.375364950902364,0,0,0,1.6942555278512,3.22227665555024,2.29158205375759,2.40594455281163,1.37016503954128,1.5107877947794,1.35004500046361,2.2516060161211,2.71885445390523,4.65984280576638,2.90604573235695,1.59609949360412,3.92687293234509,1.45864030240976,2.93458427679175,2.02227859295016,1.11123363900808,1.23621034343337,0.962757628775446,2.52697211763797,1.77435509923168,1.50901073108861,1.68554713445788,1.92075457214608,1.49332219284595,1.42888107384922,1.62238056322798,1.15745532278223,2.88460130562315,1.61918812147837,0.342869252385415,1.77475806159337,1.43061713968393,2.76158191601424,1.88218760830661,2.11536519729191,2.56099162021882,0.789209134313529,1.49384525230448,2.80571135828869,1.30498519936592,2.56111654176465,0.818462086339379,1.85924209423159,2.12197272079256,2.99772693525535,0.935726433781634,1.28922632428979,1.14772999241306,2.20591419119516,0.927471342481686
|short_description=p1@Tigd3
}}

Revision as of 11:11, 4 August 2015

Short description:p1@Tigd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tigd3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000055911, NM_198634, uc008gft.1, uc008gfu.1_5end
EntrezGene:332359
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Tigd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.96
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.47
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.86
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.98
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.62
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.80
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.68
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.41
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A62.87
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H73.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A42.85
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F16.79
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C93.24
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C64.49
eyeball, neonate N01.CNhs11140.1532-43E74.10
eyeball, neonate N02.CNhs11205.1551-44G83.75
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E23.66
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E23.17
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G14.63
intestinal mucosa, adult.CNhs10506.860-29I36.28
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G71.40
kidney, neonate N10.CNhs11206.758-6D51.39
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F83.34
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D73.04
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A34.58
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E63.78
pituitary gland, embryo E13.CNhs11009.370-44C72.72
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I14.08
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G24.27
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D15.09
spleen, neonate N20.CNhs11112.824-19H16.42
spleen, neonate N25.CNhs11099.1354-25G35.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D93.57
testis, neonate N20.CNhs11110.839-18H35.07
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I42.84
thymus, embryo E15.CNhs11005.430-45I22.47
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F83.00
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C41.62
thymus, neonate N07.CNhs11211.713-19D32.59
thymus, neonate N10.CNhs11194.748-24E41.61
thymus, neonate N20.CNhs11186.820-7A21.66
thymus, neonate N25.CNhs11125.1362-25G71.44
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I82.91
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H23.93
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.02e-1023
neuroblast (sensu Vertebrata)2.02e-1023

Uber anatomy
Ontology termp-valuen
neurectoderm2.02e-1264
neural plate2.02e-1264
presumptive neural plate2.02e-1264
neural tube6.02e-1252
neural rod6.02e-1252
future spinal cord6.02e-1252
neural keel6.02e-1252
regional part of nervous system1.04e-1154
pre-chordal neural plate6.40e-1149
brain3.04e-1047
future brain3.04e-1047
central nervous system4.00e-1073
regional part of brain7.45e-1046
gray matter8.23e-1034
anterior neural tube1.75e-0940
nervous system2.97e-0975
regional part of forebrain4.10e-0939
forebrain4.10e-0939
future forebrain4.10e-0939
ecto-epithelium3.56e-0873
brain grey matter8.66e-0829
regional part of telencephalon8.66e-0829
telencephalon8.66e-0829
ectoderm-derived structure7.83e-0795
ectoderm7.83e-0795
presumptive ectoderm7.83e-0795
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