FFCP PHASE1:Mm9::chr14:54793233..54793265,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2109|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:54793233..54793265,+|id=chr14:54793233..54793265,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000682,2.07e-14,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.33e-12!43;UBERON:0004119!1.74e-10!130;UBERON:0000925!1.74e-10!130;UBERON:0006595!1.74e-10!130;UBERON:0005409!2.26e-10!59;UBERON:0001007!5.52e-10!128;UBERON:0001555!5.52e-10!128;UBERON:0007026!5.52e-10!128;UBERON:0004921!1.71e-08!126;UBERON:0004185!1.71e-08!126;UBERON:0000344!3.46e-08!15|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.02e-23,31;UBERON:0005409,5.73e-15,47;UBERON:0001962,5.33e-11,2;UBERON:0001961,5.33e-11,2;UBERON:0001744,5.33e-11,2;UBERON:0000344,6.81e-08,15;UBERON:0002465,1.32e-07,3;UBERON:0001007,6.74e-07,116;UBERON:0001555,6.74e-07,116;UBERON:0007026,6.74e-07,116;UBERON:0004119,9.73e-07,118;UBERON:0000925,9.73e-07,118;UBERON:0006595,9.73e-07,118|phase1_expression=0,5.58360652222978,1.81999695755814,0,0,0.16787927191189,0.700837921786577,0.129123323441576,0.281577444303333,0.234064526321993,0.171217968225505,0.239316476986009,0,0.262261207256992,0,0,0,0,0,0,0.255129870453209,0,0,17.5991665072747,19.7291981717766,2.29692785646008,4.30761996159075,2.58565479223067,0.190023419456374,0,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,16.5209391491899,6.61126416658861,0,0,0,0,0,2.09248188723815,3.79623249235609,3.12928013975621,17.3421294072186,19.8956472041151,27.2949721966768,1.79763881730844,1.94524244887225,0.995706366271836,0,0,0,0,0,0,0.189709611372772,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,13.1166376483433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0.269728692769641,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0.233753804363138,0,0,0,0,0,0.375364950902364,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0.476872379894642,0,0,0.169229215783353,0,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr14:54793233..54793265,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2109 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:54793233..54793265,+ | |||
|description=CAGE_peak_at_chr14:54793233..54793265,+ | |||
|id=chr14:54793233..54793265,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.07e-14,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.33e-12!43;UBERON:0004119!1.74e-10!130;UBERON:0000925!1.74e-10!130;UBERON:0006595!1.74e-10!130;UBERON:0005409!2.26e-10!59;UBERON:0001007!5.52e-10!128;UBERON:0001555!5.52e-10!128;UBERON:0007026!5.52e-10!128;UBERON:0004921!1.71e-08!126;UBERON:0004185!1.71e-08!126;UBERON:0000344!3.46e-08!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.02e-23,31;UBERON:0005409,5.73e-15,47;UBERON:0001962,5.33e-11,2;UBERON:0001961,5.33e-11,2;UBERON:0001744,5.33e-11,2;UBERON:0000344,6.81e-08,15;UBERON:0002465,1.32e-07,3;UBERON:0001007,6.74e-07,116;UBERON:0001555,6.74e-07,116;UBERON:0007026,6.74e-07,116;UBERON:0004119,9.73e-07,118;UBERON:0000925,9.73e-07,118;UBERON:0006595,9.73e-07,118 | |||
|phase1_expression=0,5.58360652222978,1.81999695755814,0,0,0.16787927191189,0.700837921786577,0.129123323441576,0.281577444303333,0.234064526321993,0.171217968225505,0.239316476986009,0,0.262261207256992,0,0,0,0,0,0,0.255129870453209,0,0,17.5991665072747,19.7291981717766,2.29692785646008,4.30761996159075,2.58565479223067,0.190023419456374,0,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,16.5209391491899,6.61126416658861,0,0,0,0,0,2.09248188723815,3.79623249235609,3.12928013975621,17.3421294072186,19.8956472041151,27.2949721966768,1.79763881730844,1.94524244887225,0.995706366271836,0,0,0,0,0,0,0.189709611372772,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,13.1166376483433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0.269728692769641,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0.233753804363138,0,0,0,0,0,0.375364950902364,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0.476872379894642,0,0,0.169229215783353,0,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr14:54793233..54793265,+ | |||
}} |
Latest revision as of 10:37, 4 August 2015
Short description: | p@chr14:54793233..54793265, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:54793233..54793265, + |
Coexpression cluster: | MCL_coexpression_mm9:2109 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.07e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.02e-23 | 31 |
gastrointestinal system | 5.73e-15 | 47 |
gut-associated lymphoid tissue | 5.33e-11 | 2 |
mucosa-associated lymphoid tissue | 5.33e-11 | 2 |
lymphoid tissue | 5.33e-11 | 2 |
mucosa | 6.81e-08 | 15 |
lymphoid system | 1.32e-07 | 3 |
digestive system | 6.74e-07 | 116 |
digestive tract | 6.74e-07 | 116 |
primitive gut | 6.74e-07 | 116 |
endoderm-derived structure | 9.73e-07 | 118 |
endoderm | 9.73e-07 | 118 |
presumptive endoderm | 9.73e-07 | 118 |