FFCP PHASE1:Mm9::chr10:5007643..5007657,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=864|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:5007643..5007657,+|id=chr10:5007643..5007657,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!5.41e-15!50;UBERON:0006238!5.41e-15!50;UBERON:0002616!3.59e-14!49;UBERON:0002021!3.90e-14!10;UBERON:0000411!3.90e-14!10;UBERON:0001950!3.90e-14!10;UBERON:0003080!4.96e-12!40;UBERON:0000033!5.84e-12!63;UBERON:0001049!1.68e-11!52;UBERON:0005068!1.68e-11!52;UBERON:0006241!1.68e-11!52;UBERON:0007135!1.68e-11!52;UBERON:0002780!1.89e-11!39;UBERON:0001890!1.89e-11!39;UBERON:0006240!1.89e-11!39;UBERON:0003056!1.74e-10!49;UBERON:0002619!2.92e-10!17;UBERON:0000025!1.83e-09!114;UBERON:0000956!3.57e-09!21;UBERON:0001869!3.57e-09!21;UBERON:0000203!3.57e-09!21;UBERON:0002791!8.00e-09!29;UBERON:0003528!8.00e-09!29;UBERON:0001893!8.00e-09!29;UBERON:0004111!1.04e-08!122;UBERON:0000073!2.13e-08!75;UBERON:0001016!2.13e-08!75;UBERON:0001017!3.09e-08!73;UBERON:0005743!3.09e-08!73;UBERON:0002346!9.07e-08!71;UBERON:0003075!9.07e-08!71;UBERON:0007284!9.07e-08!71;UBERON:0007811!1.33e-07!86;UBERON:0000153!7.74e-07!94;UBERON:0002020!7.82e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.06e-27,10;UBERON:0000411,1.06e-27,10;UBERON:0001950,1.06e-27,10;UBERON:0002619,5.05e-20,17;UBERON:0000956,1.10e-19,21;UBERON:0001869,1.10e-19,21;UBERON:0000203,1.10e-19,21;UBERON:0002616,1.41e-18,46;UBERON:0000955,3.96e-18,47;UBERON:0006238,3.96e-18,47;UBERON:0003528,9.68e-17,29;UBERON:0002791,9.68e-17,29;UBERON:0001893,9.68e-17,29;UBERON:0002780,1.07e-16,39;UBERON:0001890,1.07e-16,39;UBERON:0006240,1.07e-16,39;UBERON:0003080,3.18e-16,40;UBERON:0001049,3.83e-16,52;UBERON:0005068,3.83e-16,52;UBERON:0006241,3.83e-16,52;UBERON:0007135,3.83e-16,52;UBERON:0000073,1.88e-15,54;UBERON:0002020,5.17e-14,34;UBERON:0003056,7.72e-13,49;UBERON:0002346,1.22e-12,64;UBERON:0003075,1.22e-12,64;UBERON:0007284,1.22e-12,64;UBERON:0010371,9.18e-11,73;UBERON:0001017,9.18e-11,73;UBERON:0001016,2.08e-10,75;UBERON:0010314,5.29e-08,92;UBERON:0004121,1.15e-07,95;UBERON:0000924,1.15e-07,95;UBERON:0006601,1.15e-07,95;UBERON:0000025,5.28e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09265815368454,0.7813353445238,0,1.17646297606203,2.04913645487534,1.94204141212461,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766124028511126,0.46081959976873,0.131886287730194,0,0,0,0,0.763991238884051,0,0,0,0,0.0755715601067855,0.869593466105033,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,1.46612694769419,0,0,0,0,0.149790639404823,2.74500361691176,0,3.12883776346098,3.58001640262463,1.0389402227978,1.46017136760982,0,0.124406970610093,3.28539585963777,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,3.15434922846191,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0.159454768657487,0.491589944147214,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0,0,0.535106452806212,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0.299033092087958,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,5.64751842617067,0.920650473014354,0.572895513439397,3.26521046453006,3.42541259885321,3.0215755895588,2.70009000092722,3.60256962579376,4.53142408984205,4.14208249401456,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.25384382367503,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421|short_description=p@chr10:5007643..5007657,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=864 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:5007643..5007657,+ | |||
|description=CAGE_peak_at_chr10:5007643..5007657,+ | |||
|id=chr10:5007643..5007657,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!5.41e-15!50;UBERON:0006238!5.41e-15!50;UBERON:0002616!3.59e-14!49;UBERON:0002021!3.90e-14!10;UBERON:0000411!3.90e-14!10;UBERON:0001950!3.90e-14!10;UBERON:0003080!4.96e-12!40;UBERON:0000033!5.84e-12!63;UBERON:0001049!1.68e-11!52;UBERON:0005068!1.68e-11!52;UBERON:0006241!1.68e-11!52;UBERON:0007135!1.68e-11!52;UBERON:0002780!1.89e-11!39;UBERON:0001890!1.89e-11!39;UBERON:0006240!1.89e-11!39;UBERON:0003056!1.74e-10!49;UBERON:0002619!2.92e-10!17;UBERON:0000025!1.83e-09!114;UBERON:0000956!3.57e-09!21;UBERON:0001869!3.57e-09!21;UBERON:0000203!3.57e-09!21;UBERON:0002791!8.00e-09!29;UBERON:0003528!8.00e-09!29;UBERON:0001893!8.00e-09!29;UBERON:0004111!1.04e-08!122;UBERON:0000073!2.13e-08!75;UBERON:0001016!2.13e-08!75;UBERON:0001017!3.09e-08!73;UBERON:0005743!3.09e-08!73;UBERON:0002346!9.07e-08!71;UBERON:0003075!9.07e-08!71;UBERON:0007284!9.07e-08!71;UBERON:0007811!1.33e-07!86;UBERON:0000153!7.74e-07!94;UBERON:0002020!7.82e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.06e-27,10;UBERON:0000411,1.06e-27,10;UBERON:0001950,1.06e-27,10;UBERON:0002619,5.05e-20,17;UBERON:0000956,1.10e-19,21;UBERON:0001869,1.10e-19,21;UBERON:0000203,1.10e-19,21;UBERON:0002616,1.41e-18,46;UBERON:0000955,3.96e-18,47;UBERON:0006238,3.96e-18,47;UBERON:0003528,9.68e-17,29;UBERON:0002791,9.68e-17,29;UBERON:0001893,9.68e-17,29;UBERON:0002780,1.07e-16,39;UBERON:0001890,1.07e-16,39;UBERON:0006240,1.07e-16,39;UBERON:0003080,3.18e-16,40;UBERON:0001049,3.83e-16,52;UBERON:0005068,3.83e-16,52;UBERON:0006241,3.83e-16,52;UBERON:0007135,3.83e-16,52;UBERON:0000073,1.88e-15,54;UBERON:0002020,5.17e-14,34;UBERON:0003056,7.72e-13,49;UBERON:0002346,1.22e-12,64;UBERON:0003075,1.22e-12,64;UBERON:0007284,1.22e-12,64;UBERON:0010371,9.18e-11,73;UBERON:0001017,9.18e-11,73;UBERON:0001016,2.08e-10,75;UBERON:0010314,5.29e-08,92;UBERON:0004121,1.15e-07,95;UBERON:0000924,1.15e-07,95;UBERON:0006601,1.15e-07,95;UBERON:0000025,5.28e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09265815368454,0.7813353445238,0,1.17646297606203,2.04913645487534,1.94204141212461,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766124028511126,0.46081959976873,0.131886287730194,0,0,0,0,0.763991238884051,0,0,0,0,0.0755715601067855,0.869593466105033,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,1.46612694769419,0,0,0,0,0.149790639404823,2.74500361691176,0,3.12883776346098,3.58001640262463,1.0389402227978,1.46017136760982,0,0.124406970610093,3.28539585963777,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,3.15434922846191,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0.159454768657487,0.491589944147214,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0,0,0.535106452806212,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0.299033092087958,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,5.64751842617067,0.920650473014354,0.572895513439397,3.26521046453006,3.42541259885321,3.0215755895588,2.70009000092722,3.60256962579376,4.53142408984205,4.14208249401456,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.25384382367503,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr10:5007643..5007657,+ | |||
}} |
Latest revision as of 10:36, 4 August 2015
Short description: | p@chr10:5007643..5007657, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:5007643..5007657, + |
Coexpression cluster: | MCL_coexpression_mm9:864 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.06e-27 | 10 |
visual cortex | 1.06e-27 | 10 |
neocortex | 1.06e-27 | 10 |
regional part of cerebral cortex | 5.05e-20 | 17 |
cerebral cortex | 1.10e-19 | 21 |
cerebral hemisphere | 1.10e-19 | 21 |
pallium | 1.10e-19 | 21 |
regional part of brain | 1.41e-18 | 46 |
brain | 3.96e-18 | 47 |
future brain | 3.96e-18 | 47 |
brain grey matter | 9.68e-17 | 29 |
regional part of telencephalon | 9.68e-17 | 29 |
telencephalon | 9.68e-17 | 29 |
regional part of forebrain | 1.07e-16 | 39 |
forebrain | 1.07e-16 | 39 |
future forebrain | 1.07e-16 | 39 |
anterior neural tube | 3.18e-16 | 40 |
neural tube | 3.83e-16 | 52 |
neural rod | 3.83e-16 | 52 |
future spinal cord | 3.83e-16 | 52 |
neural keel | 3.83e-16 | 52 |
regional part of nervous system | 1.88e-15 | 54 |
gray matter | 5.17e-14 | 34 |
pre-chordal neural plate | 7.72e-13 | 49 |
neurectoderm | 1.22e-12 | 64 |
neural plate | 1.22e-12 | 64 |
presumptive neural plate | 1.22e-12 | 64 |
ecto-epithelium | 9.18e-11 | 73 |
central nervous system | 9.18e-11 | 73 |
nervous system | 2.08e-10 | 75 |
structure with developmental contribution from neural crest | 5.29e-08 | 92 |
ectoderm-derived structure | 1.15e-07 | 95 |
ectoderm | 1.15e-07 | 95 |
presumptive ectoderm | 1.15e-07 | 95 |
tube | 5.28e-07 | 114 |