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FFCP PHASE1:Mm9::chr17:24833092..24833111,-: Difference between revisions

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{{FFCP|EntrezGene=11692|HGNC=|UniProt=P56213|association_with_transcript=0bp_to_ENSMUST00000046839,NM_023040,uc008axr.1_5end|description=CAGE_peak_2_at_Gfer_5end|id=chr17:24833092..24833111,-|ontology_enrichment_celltype=CL:0000548!4.95e-10!115;CL:0000004!4.95e-10!115;CL:0000255!4.95e-10!115;CL:0002321!1.44e-09!70;CL:0000220!1.44e-09!70;CL:0002371!1.57e-08!118;CL:0000144!2.91e-07!121;CL:0000012!2.91e-07!121|ontology_enrichment_celltype_v019_2=CL:0002321,1.39e-09,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.67e-07!43;UBERON:0009854!1.86e-07!23;UBERON:0009856!1.86e-07!23;UBERON:0002365!4.71e-07!25;UBERON:0002330!4.71e-07!25;UBERON:0002107!5.27e-07!22;UBERON:0007499!5.27e-07!22;UBERON:0006925!5.27e-07!22;UBERON:0009497!5.27e-07!22;UBERON:0000015!5.27e-07!22;UBERON:0002423!5.27e-07!22;UBERON:0006235!5.27e-07!22;UBERON:0008835!5.27e-07!22;UBERON:0003894!5.27e-07!22;UBERON:0004161!5.27e-07!22;UBERON:0008836!5.27e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.71e-07,23;UBERON:0009856,1.71e-07,23;UBERON:0002365,4.36e-07,25;UBERON:0002330,4.36e-07,25;UBERON:0002107,4.85e-07,22;UBERON:0007499,4.85e-07,22;UBERON:0006925,4.85e-07,22;UBERON:0009497,4.85e-07,22;UBERON:0000015,4.85e-07,22;UBERON:0002423,4.85e-07,22;UBERON:0006235,4.85e-07,22;UBERON:0008835,4.85e-07,22;UBERON:0003894,4.85e-07,22;UBERON:0004161,4.85e-07,22;UBERON:0008836,4.85e-07,22|phase1_expression=1.92178616525753,7.32848356042658,7.73498706962211,3.93203474698879,3.50627010962443,7.55456723603504,5.84031601488814,2.06597317506522,1.267098499365,2.34064526321993,1.71217968225505,3.5099749957948,0.856003649656029,2.18551006047494,4.99664642723494,2.42970320867791,3.49780939064073,1.41957974411207,2.19383093769182,3.39511721438424,2.72138528483423,1.98581902401771,2.08959831311148,4.63978026100879,6.19405058881359,15.5042630311055,12.9228598847722,12.4973314957816,2.85035129184561,3.52842181663903,10.6430645114546,12.7006134691926,10.4561013889377,0,9.24325183204079,12.8000676926039,6.53341940039581,0,0.7813353445238,0,0,0,0.485510353031154,5.03587271902309,6.58950052926845,9.9115246167308,11.7358701652206,6.75877984779384,5.71184075109627,7.58276606389705,6.01941612989059,11.5002051491977,1.67782606057736,0.725362142011344,0.672187598284928,4.3734104126111,2.57880095944881,5.67239301505187,3.84401275633236,1.5869729378161,6.97214543856797,22.3637391165627,7.11435836888911,7.64914759689189,13.8441290759376,14.9200824138681,11.6844043102178,11.9107674649682,4.76972216618997,3.78016627328734,5.04779907243317,3.14216082844184,3.75476519617743,5.87955836231779,4.12135525378416,4.5960939330501,3.30347642998166,0.893811366596314,1.84327839907492,3.82470234417562,2.01272815925301,4.68822033501084,1.11673199600552,1.68828783009504,0.916789486660861,5.30331453852602,1.99320353118744,4.10078780815661,6.51245262665383,3.17400552448499,0.289864488701678,9.46466264679525,4.75979933595425,14.5719861742211,11.0461990966104,6.2723764193627,1.68533304158102,2.89731548382698,4.93593408745451,5.65343319216544,3.52108549441701,0,5.09610479413291,0,9.95858788651585,11.1478340809043,11.1215377903252,4.79572294820052,1.03575153458869,1.33597925158342,4.8575891494518,5.48037860961854,5.99600292865752,4.22023393547343,3.41007250693544,2.13633205260448,1.97755974187499,2.16899035379867,1.76922110389975,1.61766849947409,1.98757366614354,1.45462575940567,7.45567044872489,0.878342391034642,0.628340120440365,4.08731288333746,1.07833612055328,1.79970819298022,1.39777249780371,1.19832511523858,0,2.89005009859588,0.347648640384553,0.255715457330331,0.83115217823824,0.648965052271031,2.13862664085664,1.36847667671102,0.758168275301024,1.26265113531884,4.68433594665733,2.5289231487682,3.42118046630164,3.0140963567143,1.15662048557257,2.0498195245576,2.24884138943349,0.776110112217047,4.74249584452253,2.83659120251729,4.22282697993477,2.41115305670332,2.22437799380478,2.089512999133,1.4404749548556,3.98068533636986,1.40442637462647,1.54408744268829,3.6941254921427,2.89976081549703,2.81431271977315,2.70093092191522,1.65721314909647,1.57411385397923,2.1597395804233,2.32533944750408,1.60964040839772,1.16765342367169,1.6455984991348,1.14917224855367,0.891756905004413,1.31579988682799,1.75640092232841,0.536825675041487,0.630869845692382,3.39585220851639,2.31293148088659,4.7601101999438,4.69234151177515,4.87697010906921,3.60828891701861,4.43703754171354,3.11329261382818,2.09248188723815,5.69434873853414,3.95277491337626,3.51869292320377,3.78017296878187,4.67913809085888,1.79763881730844,6.05186539649144,5.97423819763102,6.06937283049861,3.65595240351132,3.38123207019241,4.48032921259691,3.29719228184964,2.80543279561274,1.7706230394792,2.36176236767363,2.66897837330337,3.08492909804501,8.30067355844017,6.50695912292767,7.07612382407531,6.97072548393047,4.26006254915856,6.02942899381042,5.85639459097266,3.45235364940973,5.67473293712624,11.8061407670875,1.43768206527355,5.95425516269605,5.61667811606209,7.82994521636046,1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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:11692
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:P56213
|association_with_transcript=0bp_to_ENSMUST00000046839,NM_023040,uc008axr.1_5end
|cluster_id=chr17:24833092..24833111,-
|description=CAGE_peak_2_at_Gfer_5end
|id=chr17:24833092..24833111,-
|ontology_enrichment_celltype=CL:0000548!4.95e-10!115;CL:0000004!4.95e-10!115;CL:0000255!4.95e-10!115;CL:0002321!1.44e-09!70;CL:0000220!1.44e-09!70;CL:0002371!1.57e-08!118;CL:0000144!2.91e-07!121;CL:0000012!2.91e-07!121
|ontology_enrichment_celltype_v019_2=CL:0002321,1.39e-09,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.71e-07,23;UBERON:0009856,1.71e-07,23;UBERON:0002365,4.36e-07,25;UBERON:0002330,4.36e-07,25;UBERON:0002107,4.85e-07,22;UBERON:0007499,4.85e-07,22;UBERON:0006925,4.85e-07,22;UBERON:0009497,4.85e-07,22;UBERON:0000015,4.85e-07,22;UBERON:0002423,4.85e-07,22;UBERON:0006235,4.85e-07,22;UBERON:0008835,4.85e-07,22;UBERON:0003894,4.85e-07,22;UBERON:0004161,4.85e-07,22;UBERON:0008836,4.85e-07,22
|phase1_expression=1.92178616525753,7.32848356042658,7.73498706962211,3.93203474698879,3.50627010962443,7.55456723603504,5.84031601488814,2.06597317506522,1.267098499365,2.34064526321993,1.71217968225505,3.5099749957948,0.856003649656029,2.18551006047494,4.99664642723494,2.42970320867791,3.49780939064073,1.41957974411207,2.19383093769182,3.39511721438424,2.72138528483423,1.98581902401771,2.08959831311148,4.63978026100879,6.19405058881359,15.5042630311055,12.9228598847722,12.4973314957816,2.85035129184561,3.52842181663903,10.6430645114546,12.7006134691926,10.4561013889377,0,9.24325183204079,12.8000676926039,6.53341940039581,0,0.7813353445238,0,0,0,0.485510353031154,5.03587271902309,6.58950052926845,9.9115246167308,11.7358701652206,6.75877984779384,5.71184075109627,7.58276606389705,6.01941612989059,11.5002051491977,1.67782606057736,0.725362142011344,0.672187598284928,4.3734104126111,2.57880095944881,5.67239301505187,3.84401275633236,1.5869729378161,6.97214543856797,22.3637391165627,7.11435836888911,7.64914759689189,13.8441290759376,14.9200824138681,11.6844043102178,11.9107674649682,4.76972216618997,3.78016627328734,5.04779907243317,3.14216082844184,3.75476519617743,5.87955836231779,4.12135525378416,4.5960939330501,3.30347642998166,0.893811366596314,1.84327839907492,3.82470234417562,2.01272815925301,4.68822033501084,1.11673199600552,1.68828783009504,0.916789486660861,5.30331453852602,1.99320353118744,4.10078780815661,6.51245262665383,3.17400552448499,0.289864488701678,9.46466264679525,4.75979933595425,14.5719861742211,11.0461990966104,6.2723764193627,1.68533304158102,2.89731548382698,4.93593408745451,5.65343319216544,3.52108549441701,0,5.09610479413291,0,9.95858788651585,11.1478340809043,11.1215377903252,4.79572294820052,1.03575153458869,1.33597925158342,4.8575891494518,5.48037860961854,5.99600292865752,4.22023393547343,3.41007250693544,2.13633205260448,1.97755974187499,2.16899035379867,1.76922110389975,1.61766849947409,1.98757366614354,1.45462575940567,7.45567044872489,0.878342391034642,0.628340120440365,4.08731288333746,1.07833612055328,1.79970819298022,1.39777249780371,1.19832511523858,0,2.89005009859588,0.347648640384553,0.255715457330331,0.83115217823824,0.648965052271031,2.13862664085664,1.36847667671102,0.758168275301024,1.26265113531884,4.68433594665733,2.5289231487682,3.42118046630164,3.0140963567143,1.15662048557257,2.0498195245576,2.24884138943349,0.776110112217047,4.74249584452253,2.83659120251729,4.22282697993477,2.41115305670332,2.22437799380478,2.089512999133,1.4404749548556,3.98068533636986,1.40442637462647,1.54408744268829,3.6941254921427,2.89976081549703,2.81431271977315,2.70093092191522,1.65721314909647,1.57411385397923,2.1597395804233,2.32533944750408,1.60964040839772,1.16765342367169,1.6455984991348,1.14917224855367,0.891756905004413,1.31579988682799,1.75640092232841,0.536825675041487,0.630869845692382,3.39585220851639,2.31293148088659,4.7601101999438,4.69234151177515,4.87697010906921,3.60828891701861,4.43703754171354,3.11329261382818,2.09248188723815,5.69434873853414,3.95277491337626,3.51869292320377,3.78017296878187,4.67913809085888,1.79763881730844,6.05186539649144,5.97423819763102,6.06937283049861,3.65595240351132,3.38123207019241,4.48032921259691,3.29719228184964,2.80543279561274,1.7706230394792,2.36176236767363,2.66897837330337,3.08492909804501,8.30067355844017,6.50695912292767,7.07612382407531,6.97072548393047,4.26006254915856,6.02942899381042,5.85639459097266,3.45235364940973,5.67473293712624,11.8061407670875,1.43768206527355,5.95425516269605,5.61667811606209,7.82994521636046,10.225652570749,11.0962009913574,1.29327233116623,5.30575952957357,5.0519142697028,5.94107800213158,5.16318546234705,2.34508760418542,1.90434912708811,1.36593553500459,1.89162172927429,1.32878813789265,1.43509291791738,0.327726629431476,1.72684981865896,1.88043776155965,4.52373851817817,4.35124547054968,5.90117127622843,5.79467167239938,1.12385412991454,1.87538698547525,7.04920265119704,1.76729649043061,6.62567260774139,5.46614242015294,2.58508077279359,5.25731355495614,4.67877215573028,5.66153061577665,13.3587531552715,7.59865230569411,3.16230222357219,0.963963949265421,2.2710413633323,3.38324646967785,2.76907830901079,1.31976098378028,2.65490276679926,5.34117399540959,6.65111825322452,3.01768127609437,4.72483028609236,6.7635732547664,3.87642439752332,2.90826983582004,2.85197902707777,4.42451461110142,5.27093042874994,7.21948802737308,0.680879211507576,3.42116078659489,2.45781499187234,2.7863814554107,1.95074257006501,2.49716344642899,2.96188237083818,1.2178597964584,2.58138878870081,5.71946591332314,2.42581237860458,1.97863503529776,1.13025098687134,2.0506394475573,1.79058516004705,1.64140899745061,4.66369338607761,2.22510362412612,3.2465467351592,4.12773735926445,2.03713980106683,3.39063222608444,2.7338845544205,2.28778173206523,0.509935289981566,1.11961161858926,0.276399947608848,0,5.06137589729817,2.64315307264903,3.78018692876304,3.55450103224597,1.74690050996942,3.10187996685088,1.98368293740806,2.35580347785627,7.2584385043404,1.86401793926078,3.38215763210514,2.8408143748356,6.6183396182839,2.72231663681667,3.22899558694328,2.87225413334323,1.29092962510329,2.0832701575032,5.7672639434141,3.14059357073808,2.88030006257865,2.52808896502543,5.0681303822541,3.28675062927447,2.7283372825337,3.22248052201467,2.98022032171897,2.64429988943931,2.36303243479324,2.1202954489111,1.82896335972,1.81487133246313,2.92373642219257,2.02044867444692,1.28564592399726,1.58711268530648,11.5432695754514,17.3147743256288,16.7884616364078,1.15913756419314,2.064507229963,2.74727436400898,2.78678892802786,1.50471631210609,0.564751842617067,0.920650473014354,0.572895513439397,1.71853182343688,0.685082519770642,1.5107877947794,1.35004500046361,0.45032120322422,1.35942722695261,0,5.91587881229807,3.59122386060928,4.60980735536162,5.34834777550247,4.82110274044359,3.12533964365024,1.11123363900808,1.64828045791115,2.56735367673452,3.79045817645696,2.5347929989024,2.45214243801899,3.37109426891577,2.43295579138503,2.29741875822453,2.38146845641537,2.43357084484197,1.15745532278223,1.64834360321323,1.76638704161277,2.74295401908332,2.48466128623072,3.57654284920981,1.74415699958794,1.97629698872194,3.38458431566706,2.56099162021882,4.20911538300549,1.90125759384206,1.68342681497322,2.13543032623513,2.26560309463796,2.45538625901814,2.32405261778949,2.89359916471712,1.99848462350357,2.10538447600868,1.93383948643468,2.48674831689496,2.20591419119516,2.08681052058379
|short_description=p2@Gfer
}}

Revision as of 10:25, 4 August 2015

Short description:p2@Gfer
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gfer_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000046839, NM_023040, uc008axr.1_5end
EntrezGene:11692
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gfer

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I57.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.84
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.51
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.19
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.43
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.19
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.19
GP2+ M cell, pool1.CNhs13228.11845-124H915.50
GP2+ M cell, pool2.CNhs13231.11846-124I112.92
GP2+ M cell, pool3.CNhs13240.11847-124I212.50
Ileum epithelium, pool1.CNhs13199.10252-104B92.85
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.70
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G610.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.24
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F612.80
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.59
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.91
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B711.74
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.76
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.71
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.02
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.37
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C33.84
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C622.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E713.84
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D214.92
Mouse Microglia, donor1.CNhs12629.11718-123C811.68
Mouse Microglia, donor2.CNhs12634.11736-123E811.91
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.77
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.12
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.82
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.10
Mouse Schwann, donor1.CNhs12507.11728-123D96.51
Mouse Schwann, donor2.CNhs12573.11746-123F93.17
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C814.57
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.05
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.27
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.65
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.52
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.96
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G211.15
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G311.12
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.80
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C54.86
adrenal gland, embryo E16.CNhs11004.1254-43D65.48
adrenal gland, embryo E17.CNhs11043.1263-45I16.00
adrenal gland, embryo E18.CNhs11026.1262-18F54.22
adrenal gland, neonate N00.CNhs11191.1311-23C13.41
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H12.17
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H74.09
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F12.89
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C64.68
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D43.01
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G82.25
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E24.22
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I63.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.69
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I92.70
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C62.16
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G13.40
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A34.76
intestine, embryo E12.CNhs11019.1251-16I54.69
intestine, embryo E13.CNhs11010.381-16D54.88
intestine, embryo E15.CNhs10602.976-16D83.61
intestine, embryo E16.CNhs10585.463-22H44.44
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E93.95
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F23.78
intestine, neonate N10.CNhs11098.755-23A54.68
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E36.05
intestine, neonate N30.CNhs11131.1384-42G15.97
kidney, embryo E14.CNhs10606.411-4I96.07
kidney, embryo E15.CNhs10997.434-16F83.66
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I24.48
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G72.81
kidney, neonate N10.CNhs11206.758-6D51.77
kidney, neonate N20.CNhs11113.832-19I12.36
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H13.08
liver, adult pregnant day01.CNhs10466.508-5B28.30
liver, embryo E12.CNhs10601.355-15F86.51
liver, embryo E13.CNhs10524.378-3H67.08
liver, embryo E14.CNhs10594.409-16E16.97
liver, embryo E15.CNhs10520.433-16D74.26
liver, embryo E16.CNhs10523.462-17F56.03
liver, embryo E17.CNhs10510.481-18A35.86
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F45.67
liver, neonate N03.CNhs11123.1345-25G211.81
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H25.95
liver, neonate N10.CNhs11115.751-24B95.62
liver, neonate N20.CNhs11220.823-25A37.83
liver, neonate N25.CNhs11198.1368-26H110.23
liver, neonate N30.CNhs11106.1382-42D111.10
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G25.31
lung, embryo E14.CNhs10604.404-26F85.05
lung, embryo E15.CNhs11020.432-17C55.94
lung, embryo E16.CNhs10998.458-17B65.16
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H25.79
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.05
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.26
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.36
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.60
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F45.34
pancreas, embryo E15.CNhs11042.1556-45F26.65
pancreas, embryo E16.CNhs11003.460-26E53.02
pancreas, embryo E17.CNhs10599.1558-45G34.72
pancreas, embryo E18.CNhs10580.1535-43I76.76
pancreas, neonate N00.CNhs11105.645-26G93.88
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F62.50
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G35.72
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H32.05
skin, neonate N06.CNhs11097.693-20I51.79
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G23.25
spleen, embryo E16.CNhs11035.461-43C14.13
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H12.73
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E35.06
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D43.78
stomach, embryo E17.CNhs11006.1035-18D53.55
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B83.10
stomach, neonate N07.CNhs11210.718-18A91.98
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I17.26
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F52.84
testis, embryo E15.CNhs11034.443-27C56.62
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I53.23
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D95.77
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I45.07
thymus, embryo E15.CNhs11005.430-45I23.29
thymus, embryo E16.CNhs11002.456-26C52.73
thymus, embryo E17.CNhs10581.478-18C13.22
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F82.64
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C42.12
thymus, neonate N07.CNhs11211.713-19D31.83
thymus, neonate N10.CNhs11194.748-24E41.81
thymus, neonate N20.CNhs11186.820-7A22.92
thymus, neonate N25.CNhs11125.1362-25G72.02
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H311.54
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F717.31
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G516.79
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I85.92
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H24.61
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B14.82
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.14
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B42.09





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
embryonic cell1.39e-0970

Uber anatomy
Ontology termp-valuen
digestive tract diverticulum1.71e-0723
sac1.71e-0723
exocrine gland4.36e-0725
exocrine system4.36e-0725
liver4.85e-0722
epithelial sac4.85e-0722
digestive gland4.85e-0722
epithelium of foregut-midgut junction4.85e-0722
anatomical boundary4.85e-0722
hepatobiliary system4.85e-0722
foregut-midgut junction4.85e-0722
hepatic diverticulum4.85e-0722
liver primordium4.85e-0722
septum transversum4.85e-0722
liver bud4.85e-0722
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