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FFCP PHASE1:Mm9::chr3:96433842..96433878,+: Difference between revisions

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{{FFCP|EntrezGene=60365|HGNC=|MCL_coexpression_id=878|UniProt=Q9CWZ3|association_with_transcript=0bp_to_ENSMUST00000048915,NM_001102407,NM_025875,uc008qnk.2,uc008qnl.2_5end|description=CAGE_peak_1_at_Rbm8a_5end|id=chr3:96433842..96433878,+|ontology_enrichment_celltype=CL:0000063!9.26e-16!66;CL:0000988!6.51e-10!32;CL:0002032!6.51e-10!32;CL:0000037!6.51e-10!32;CL:0000566!6.51e-10!32;CL:0000837!6.51e-10!32;CL:0002076!1.49e-08!15;CL:0002031!8.60e-08!25;CL:0000542!1.14e-07!13;CL:0000051!1.14e-07!13;CL:0000066!1.37e-07!25;CL:0000838!1.97e-07!12;CL:0002320!3.05e-07!46;CL:0000134!3.05e-07!46;CL:0000084!8.14e-07!11;CL:0000827!8.14e-07!11|ontology_enrichment_celltype_v019_2=CL:0000988,1.21e-11,32;CL:0002032,1.21e-11,32;CL:0000037,1.21e-11,32;CL:0000837,1.21e-11,32;CL:0002320,1.95e-09,46;CL:0000134,1.95e-09,46;CL:0002031,2.89e-09,25;CL:0002076,2.97e-09,15;CL:0000066,7.92e-09,25;CL:0000542,2.78e-08,13;CL:0000051,2.78e-08,13;CL:0000838,5.09e-08,12;CL:0000219,1.95e-07,54;CL:0000738,2.06e-07,17;CL:0002087,2.06e-07,17;CL:0000084,2.41e-07,11;CL:0000827,2.41e-07,11;CL:0000791,6.35e-07,9;CL:0000789,6.35e-07,9;CL:0002420,6.35e-07,9;CL:0002419,6.35e-07,9;CL:0000790,6.35e-07,9;CL:0000223,7.15e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!3.05e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.95e-09,46;UBERON:0002193,5.62e-07,48;UBERON:0002405,5.62e-07,48;UBERON:0000344,9.69e-07,15|phase1_expression=5.2849119544582,6.63053274514786,5.91499011206397,9.0739263392049,9.5170188689806,4.36486106970913,18.221785966451,12.2667157269497,19.2880549347783,16.8526458951835,45.3727615797588,34.38180052699,15.5792664237397,10.1407666806037,0.666219523631325,23.28465574983,26.5833513688696,16.8772258466657,14.1227866613911,13.580468857537,0.425216450755349,1.29078236561151,30.0379757509776,20.9590073859363,17.2056960800378,6.89078356938024,9.04600191934057,7.32602191132023,19.7624356234629,9.07308467135751,8.64748991555688,10.1604907753541,0,15.8481681015439,4.62162591602039,6.31691652362271,6.12508068787107,5.4409111995798,9.37602413428561,10.470474879476,5.88231488031014,8.87959130445979,7.2826552954673,0.251793635951155,0.811015449756117,0.367093504323363,0,0.218025156380447,0.219686182734472,0.972149495371417,0.279972843250725,0,25.1673909086605,23.211588544363,22.1821907434026,1.02903774414379,0.85960031981627,1.03134418455488,0,1.5869729378161,0,0.338844532069132,0.889294796111139,0,1.97773272513395,0,0,0.384218305321555,0.207379224616955,0.810035629990144,1.05162480675691,0.285650984403804,0.662605622854841,0.61245399607477,0.958454710182364,0.919218786610021,0,0.766124028511126,0.768032666281217,1.05509030184155,0.274462930807229,1.04182674111352,0.837548997004143,1.12552522006336,1.06958773443767,0.589257170947335,0.711858403995515,0.372798891650601,17.4170244666323,14.7364542208232,11.5945795480671,13.7667820317022,0.679971333707751,0,0,1.34408066129201,0.842666520790511,1.70430322578058,15.3273742715693,25.0871097902342,6.61964072950398,30.7983545794363,30.5766287647975,63.9960032837998,25.5459428393233,24.3225470856095,25.7817466957539,0.5709193985953,0.776813650941515,0.593768556259299,2.60227990149204,1.82679286987285,0.922461989024234,1.65794904607885,0.352766121407114,0.502666365318702,0.741584903203122,0.144599356919912,0.884610551949874,1.13236794963186,0.883366073841574,1.93950101254089,1.86391761218122,0.292780797011547,0.628340120440365,0.255457055208591,12.3409578241098,24.5960119707297,10.9280395282836,0.449371918214468,0.915001205637253,1.13088916901578,0.521472960576829,0.511430914660661,0.62336413367868,0,0.305518091550949,0.622034853050465,0.505445516867349,0.420883711772948,1.95180664444056,1.14951052216736,0.540186389416048,1.05493372485001,0.748401490664606,1.2811372028485,1.12442069471675,0.517406741478031,1.29340795759705,0.945530400839096,1.40760899331159,0.657587197282725,1.39023624612799,1.0447564995665,2.05782136407943,0.995171334092466,22.4708219940235,26.2494865257009,0.568326998791185,0.414251545071004,1.87620847984877,1.44049649168812,0.946978942340841,0.787056926989615,1.3884040159864,0.697601834251224,0.804820204198858,1.5179494507732,0.329119699826961,0.820837320395476,0.56748166682099,1.75439984910399,1.09775057645525,0.134206418760372,1.05144974282064,1.64647379806855,0.330418782983798,1.32225283331772,2.55945900642281,1.39342003116263,0.644337306610467,0.80673409849337,0.444756087689741,0.760902504450237,1.89811624617805,1.15289268306808,1.25667604400135,0.596869416123452,1.16978452271472,0.898819408654221,1.72910439899755,0.796565093017469,1.13800740571849,1.71372768914593,1.1270773567308,0.610953983535943,0.581857461502877,0.631222379012867,0.505892296994058,1.32849133181642,0.627994911365499,0.740382983530803,1.1858105083486,0.83422552858047,2.94838492669805,0,1.21716072833102,0.964708639009667,1.2731292589071,1.15078454980324,0.972811360650212,0.823684239564244,1.43768206527355,1.11642284300551,0.624075346229121,0.75773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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:60365
|HGNC=
|MCL_coexpression_id=878
|TSSclassifier=NA
|UniProt=uniprot:Q9CWZ3
|association_with_transcript=0bp_to_ENSMUST00000048915,NM_001102407,NM_025875,uc008qnk.2,uc008qnl.2_5end
|cluster_id=chr3:96433842..96433878,+
|description=CAGE_peak_1_at_Rbm8a_5end
|id=chr3:96433842..96433878,+
|ontology_enrichment_celltype=CL:0000063!9.26e-16!66;CL:0000988!6.51e-10!32;CL:0002032!6.51e-10!32;CL:0000037!6.51e-10!32;CL:0000566!6.51e-10!32;CL:0000837!6.51e-10!32;CL:0002076!1.49e-08!15;CL:0002031!8.60e-08!25;CL:0000542!1.14e-07!13;CL:0000051!1.14e-07!13;CL:0000066!1.37e-07!25;CL:0000838!1.97e-07!12;CL:0002320!3.05e-07!46;CL:0000134!3.05e-07!46;CL:0000084!8.14e-07!11;CL:0000827!8.14e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000988,1.21e-11,32;CL:0002032,1.21e-11,32;CL:0000037,1.21e-11,32;CL:0000837,1.21e-11,32;CL:0002320,1.95e-09,46;CL:0000134,1.95e-09,46;CL:0002031,2.89e-09,25;CL:0002076,2.97e-09,15;CL:0000066,7.92e-09,25;CL:0000542,2.78e-08,13;CL:0000051,2.78e-08,13;CL:0000838,5.09e-08,12;CL:0000219,1.95e-07,54;CL:0000738,2.06e-07,17;CL:0002087,2.06e-07,17;CL:0000084,2.41e-07,11;CL:0000827,2.41e-07,11;CL:0000791,6.35e-07,9;CL:0000789,6.35e-07,9;CL:0002420,6.35e-07,9;CL:0002419,6.35e-07,9;CL:0000790,6.35e-07,9;CL:0000223,7.15e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002384!3.05e-07!46
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.95e-09,46;UBERON:0002193,5.62e-07,48;UBERON:0002405,5.62e-07,48;UBERON:0000344,9.69e-07,15
|phase1_expression=5.2849119544582,6.63053274514786,5.91499011206397,9.0739263392049,9.5170188689806,4.36486106970913,18.221785966451,12.2667157269497,19.2880549347783,16.8526458951835,45.3727615797588,34.38180052699,15.5792664237397,10.1407666806037,0.666219523631325,23.28465574983,26.5833513688696,16.8772258466657,14.1227866613911,13.580468857537,0.425216450755349,1.29078236561151,30.0379757509776,20.9590073859363,17.2056960800378,6.89078356938024,9.04600191934057,7.32602191132023,19.7624356234629,9.07308467135751,8.64748991555688,10.1604907753541,0,15.8481681015439,4.62162591602039,6.31691652362271,6.12508068787107,5.4409111995798,9.37602413428561,10.470474879476,5.88231488031014,8.87959130445979,7.2826552954673,0.251793635951155,0.811015449756117,0.367093504323363,0,0.218025156380447,0.219686182734472,0.972149495371417,0.279972843250725,0,25.1673909086605,23.211588544363,22.1821907434026,1.02903774414379,0.85960031981627,1.03134418455488,0,1.5869729378161,0,0.338844532069132,0.889294796111139,0,1.97773272513395,0,0,0.384218305321555,0.207379224616955,0.810035629990144,1.05162480675691,0.285650984403804,0.662605622854841,0.61245399607477,0.958454710182364,0.919218786610021,0,0.766124028511126,0.768032666281217,1.05509030184155,0.274462930807229,1.04182674111352,0.837548997004143,1.12552522006336,1.06958773443767,0.589257170947335,0.711858403995515,0.372798891650601,17.4170244666323,14.7364542208232,11.5945795480671,13.7667820317022,0.679971333707751,0,0,1.34408066129201,0.842666520790511,1.70430322578058,15.3273742715693,25.0871097902342,6.61964072950398,30.7983545794363,30.5766287647975,63.9960032837998,25.5459428393233,24.3225470856095,25.7817466957539,0.5709193985953,0.776813650941515,0.593768556259299,2.60227990149204,1.82679286987285,0.922461989024234,1.65794904607885,0.352766121407114,0.502666365318702,0.741584903203122,0.144599356919912,0.884610551949874,1.13236794963186,0.883366073841574,1.93950101254089,1.86391761218122,0.292780797011547,0.628340120440365,0.255457055208591,12.3409578241098,24.5960119707297,10.9280395282836,0.449371918214468,0.915001205637253,1.13088916901578,0.521472960576829,0.511430914660661,0.62336413367868,0,0.305518091550949,0.622034853050465,0.505445516867349,0.420883711772948,1.95180664444056,1.14951052216736,0.540186389416048,1.05493372485001,0.748401490664606,1.2811372028485,1.12442069471675,0.517406741478031,1.29340795759705,0.945530400839096,1.40760899331159,0.657587197282725,1.39023624612799,1.0447564995665,2.05782136407943,0.995171334092466,22.4708219940235,26.2494865257009,0.568326998791185,0.414251545071004,1.87620847984877,1.44049649168812,0.946978942340841,0.787056926989615,1.3884040159864,0.697601834251224,0.804820204198858,1.5179494507732,0.329119699826961,0.820837320395476,0.56748166682099,1.75439984910399,1.09775057645525,0.134206418760372,1.05144974282064,1.64647379806855,0.330418782983798,1.32225283331772,2.55945900642281,1.39342003116263,0.644337306610467,0.80673409849337,0.444756087689741,0.760902504450237,1.89811624617805,1.15289268306808,1.25667604400135,0.596869416123452,1.16978452271472,0.898819408654221,1.72910439899755,0.796565093017469,1.13800740571849,1.71372768914593,1.1270773567308,0.610953983535943,0.581857461502877,0.631222379012867,0.505892296994058,1.32849133181642,0.627994911365499,0.740382983530803,1.1858105083486,0.83422552858047,2.94838492669805,0,1.21716072833102,0.964708639009667,1.2731292589071,1.15078454980324,0.972811360650212,0.823684239564244,1.43768206527355,1.11642284300551,0.624075346229121,0.757736633841335,0.538192240565737,0,0.923765950833023,2.08440552947533,0.977789858652155,1.69745085775188,1.64283173801951,1.34005005953453,1.19021820443007,0.195133647857799,1.26108115284953,1.32878813789265,1.43509291791738,1.63863314715738,0.863424909329478,1.15719246865209,22.6186925908908,15.2293591469239,1.96705709207614,0.551873492609465,0.642202359951168,0.703270119553219,1.80328439914343,1.26235463602186,0.315508219416257,2.34263246577983,2.36965737506079,0.955875191810208,0.668396022247182,0.566153061577665,0,0.292255857911312,0.395287777946524,0.642642632843614,0.425820255624806,1.42452482933804,0.488660878060728,1.48473110675282,0,0.728341908464944,1.81394134178851,2.07465587731488,1.47650946440386,1.53717573971964,0.258428293168221,0.363533729477506,2.13898427030833,2.21225730555071,2.10837217149998,0,1.02131881726136,2.52085531643834,2.06973894052407,1.92903331528433,0.532020700926821,0.535106452806212,0.822745103010605,1.522324745573,1.64270195644597,0.42366414172764,0.882113592219848,0.65954501176592,1.29171541356724,0.72375509913787,1.3130957840345,1.64140899745061,0.582961673259701,0.741701208042039,0.170870880797853,1.23832120777933,1.29636169158798,1.31857919903284,3.00727300986255,1.37266903923914,11.2185763795945,8.39708713941948,7.60099855924331,0.954670618015114,1.26534397432454,1.01659733563424,1.40406943068342,1.25452977608681,2.18362563746178,1.07891477107857,0.909188012978695,0.785267825952089,1.16653475962614,0,1.12738587736838,1.04661582230785,1.32366792365678,0.388902376688095,2.0665571756437,1.520605129417,1.64300134104056,0.651021924219751,2.51662426621706,2.65742532908607,1.44015003128933,0.948033361884535,0.810900861160657,1.74608627180206,1.81889152168913,1.25318686967237,0.79472541912506,0.721172697119813,2.06765338044408,2.62512769865184,1.143102099825,1.81487133246313,1.55932609183604,1.73181314952593,1.98690733708667,0.226730383615211,29.5241317987506,17.8530574652857,26.5257693855244,0.965947970160952,1.12609485270709,0.73260649706906,1.07184189539533,1.00314420807073,1.12950368523413,0.920650473014354,1.14579102687879,9.79563139359019,1.37016503954128,0,0,0.45032120322422,0.453142408984205,0,2.69847103718859,1.59609949360412,1.36586884603307,1.21553358534147,2.72497111416377,1.10306105070008,0.888986911206461,0.824140228955577,0.962757628775446,0.758091635291392,1.52087579934144,1.32038438970253,0.561849044819294,0.832326981263301,0.804096565378586,0.476293691283074,0.463537303779422,0.77163688185482,2.47251540481984,0.441596760403192,1.02860775715625,1.06485483695602,0.476872379894642,1.16277133305863,0.658765662907314,0.930760686808441,0.365855945745545,0,0.679020569229309,1.12228454331548,1.42362021749009,0.689531376628944,1.63692417267876,1.85924209423159,0.578719832943424,0.499621155875892,0.233931608445408,0.429742108096597,0.956441660344217,1.32354851471709,1.15933917810211
|short_description=p1@Rbm8a
}}

Revision as of 09:31, 4 August 2015

Short description:p1@Rbm8a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rbm8a_5end
Coexpression cluster:MCL_coexpression_mm9:878
Association with transcript: 0bp_to_ENSMUST00000048915, NM_001102407, NM_025875, uc008qnk.2, uc008qnl.2_5end
EntrezGene:60365
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rbm8a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.63
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.07
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I818.22
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E912.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E719.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F216.85
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E645.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F134.38
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E415.58
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E810.14
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A323.28
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A526.58
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A216.88
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A414.12
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A613.58
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I930.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D120.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D217.21
GP2+ M cell, pool1.CNhs13228.11845-124H96.89
GP2+ M cell, pool2.CNhs13231.11846-124I19.05
GP2+ M cell, pool3.CNhs13240.11847-124I27.33
Ileum epithelium, pool1.CNhs13199.10252-104B919.76
Ileum epithelium, pool2.CNhs13232.10253-104C19.07
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.16
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H19.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H310.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A225.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I923.21
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A122.18
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D917.42
Mouse Schwann, donor2.CNhs12573.11746-123F914.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.59
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F713.77
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E315.33
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I825.09
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.62
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H130.80
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I830.58
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B664.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G125.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G224.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G325.78
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C712.34
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D124.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D410.93
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C822.47
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D226.25
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G11.65
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H62.95
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A122.62
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A115.23
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I51.31
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H13.01
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C611.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.60
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D92.52
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I21.75
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C42.63
thymus, neonate N07.CNhs11211.713-19D31.14
thymus, neonate N10.CNhs11194.748-24E41.81
thymus, neonate N20.CNhs11186.820-7A21.56
thymus, neonate N25.CNhs11125.1362-25G71.73
thymus, neonate N30.CNhs11132.1393-42G21.99
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H329.52
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F717.85
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G526.53
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.80
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I82.70
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.16





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
connective tissue1.95e-0946
hemolymphoid system5.62e-0748
immune system5.62e-0748
mucosa9.69e-0715
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