FFCP PHASE1:Mm9::chr10:39360917..39360930,+: Difference between revisions
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{{FFCP|EntrezGene=103213|HGNC=|UniProt=|association_with_transcript=-9bp_to_ENSMUST00000129693_5end|description=CAGE_peak_9_at_Traf3ip2_5end|id=chr10:39360917..39360930,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005157!5.42e-13!27;UBERON:0002048!4.13e-10!14;UBERON:0000117!4.13e-10!14;UBERON:0000171!4.13e-10!14;UBERON:0000170!4.13e-10!14;UBERON:0005597!4.13e-10!14;UBERON:0000118!4.13e-10!14;UBERON:0000991!6.61e-08!18;UBERON:0005564!6.61e-08!18;UBERON:0005153!1.29e-07!17;UBERON:0005178!1.29e-07!17;UBERON:0005181!1.29e-07!17;UBERON:0002224!1.29e-07!17;UBERON:0000915!1.29e-07!17;UBERON:0008947!1.29e-07!17;UBERON:0003258!1.29e-07!17;UBERON:0004176!4.99e-07!17;UBERON:0009196!4.99e-07!17;UBERON:0009117!4.99e-07!17;UBERON:0002342!8.96e-07!10;UBERON:0005062!8.96e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000991,2.07e-18,18;UBERON:0005564,2.07e-18,18;UBERON:0004176,4.59e-15,17;UBERON:0009196,4.59e-15,17;UBERON:0009117,4.59e-15,17;UBERON:0000473,9.85e-14,14;UBERON:0003133,1.39e-13,24;UBERON:0003135,8.64e-13,15;UBERON:0005156,1.82e-12,26;UBERON:0000990,1.82e-12,26;UBERON:0003101,5.78e-12,16;UBERON:0000079,5.78e-12,16;UBERON:0002323,1.78e-08,37;UBERON:0004458,1.78e-08,37;UBERON:0003886,3.16e-08,38;UBERON:0002553,5.45e-08,39|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12552522006336,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.867426633830679,0.608930956624282,0.230615497256059,0.60289056221049,1.41106448562846,0.125666591329675,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.124406970610093,0,0,1.30120442962704,0.919608417733892,0.360124259610698,0,0.136072998302656,0,0.187403449119458,0,0,0,0,0,0,0.348252166522167,0,1.99034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0.898819408654221,0,0,0,0.342745537829186,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.189491411770485,0.814824882210129,0,1.40814148973101,2.01007508930179,2.61848004974615,0.390267295715598,0.472905432318573,0.44292937929755,0.318909537314974,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0,0,0,0,0,0.315508219416257,1.17131623288992,0.215423397732799,0.477937595905104,0,0.283076530788832,0.404810701674894,0.292255857911312,1.18586333383957,0,1.84522110770749,0.178065603667255,0,0.494910368917606,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,1.26042765821917,0.129358683782755,0.214337035031592,0.709360934569094,0.356737635204141,0.493647061806363,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,3.28936401296753,3.14371131868485,1.75006069509643,2.32487682259916,4.39285926276023,3.16864544343536,0.911430693907651,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0.367687016900028,0.44449345560323,0,0.320919209591815,0.758091635291392,0.50695859978048,0.754505365544305,0.0936415074698824,0.320125762024346,0.287177344778066,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0,0,0.564656282491984,0.169229215783353,0,0,0.271608227691724,0,0.711810108745045,0.0985044823755635,0.409231043169689,0.309873682371932,0.385813221962283,0,0.467863216890817,0.214871054048298,0.191288332068843,0,0|short_description=p9@Traf3ip2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:103213 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-9bp_to_ENSMUST00000129693_5end | |||
|cluster_id=chr10:39360917..39360930,+ | |||
|description=CAGE_peak_9_at_Traf3ip2_5end | |||
|id=chr10:39360917..39360930,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005157!5.42e-13!27;UBERON:0002048!4.13e-10!14;UBERON:0000117!4.13e-10!14;UBERON:0000171!4.13e-10!14;UBERON:0000170!4.13e-10!14;UBERON:0005597!4.13e-10!14;UBERON:0000118!4.13e-10!14;UBERON:0000991!6.61e-08!18;UBERON:0005564!6.61e-08!18;UBERON:0005153!1.29e-07!17;UBERON:0005178!1.29e-07!17;UBERON:0005181!1.29e-07!17;UBERON:0002224!1.29e-07!17;UBERON:0000915!1.29e-07!17;UBERON:0008947!1.29e-07!17;UBERON:0003258!1.29e-07!17;UBERON:0004176!4.99e-07!17;UBERON:0009196!4.99e-07!17;UBERON:0009117!4.99e-07!17;UBERON:0002342!8.96e-07!10;UBERON:0005062!8.96e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,2.07e-18,18;UBERON:0005564,2.07e-18,18;UBERON:0004176,4.59e-15,17;UBERON:0009196,4.59e-15,17;UBERON:0009117,4.59e-15,17;UBERON:0000473,9.85e-14,14;UBERON:0003133,1.39e-13,24;UBERON:0003135,8.64e-13,15;UBERON:0005156,1.82e-12,26;UBERON:0000990,1.82e-12,26;UBERON:0003101,5.78e-12,16;UBERON:0000079,5.78e-12,16;UBERON:0002323,1.78e-08,37;UBERON:0004458,1.78e-08,37;UBERON:0003886,3.16e-08,38;UBERON:0002553,5.45e-08,39 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12552522006336,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.867426633830679,0.608930956624282,0.230615497256059,0.60289056221049,1.41106448562846,0.125666591329675,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.124406970610093,0,0,1.30120442962704,0.919608417733892,0.360124259610698,0,0.136072998302656,0,0.187403449119458,0,0,0,0,0,0,0.348252166522167,0,1.99034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0.898819408654221,0,0,0,0.342745537829186,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.189491411770485,0.814824882210129,0,1.40814148973101,2.01007508930179,2.61848004974615,0.390267295715598,0.472905432318573,0.44292937929755,0.318909537314974,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0,0,0,0,0,0.315508219416257,1.17131623288992,0.215423397732799,0.477937595905104,0,0.283076530788832,0.404810701674894,0.292255857911312,1.18586333383957,0,1.84522110770749,0.178065603667255,0,0.494910368917606,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,1.26042765821917,0.129358683782755,0.214337035031592,0.709360934569094,0.356737635204141,0.493647061806363,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,3.28936401296753,3.14371131868485,1.75006069509643,2.32487682259916,4.39285926276023,3.16864544343536,0.911430693907651,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0.367687016900028,0.44449345560323,0,0.320919209591815,0.758091635291392,0.50695859978048,0.754505365544305,0.0936415074698824,0.320125762024346,0.287177344778066,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0,0,0.564656282491984,0.169229215783353,0,0,0.271608227691724,0,0.711810108745045,0.0985044823755635,0.409231043169689,0.309873682371932,0.385813221962283,0,0.467863216890817,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p9@Traf3ip2 | |||
}} |
Revision as of 08:39, 4 August 2015
Short description: | p9@Traf3ip2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Traf3ip2_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENSMUST00000129693_5end |
EntrezGene: | 103213 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gonad | 2.07e-18 | 18 |
gonad primordium | 2.07e-18 | 18 |
external genitalia | 4.59e-15 | 17 |
indifferent external genitalia | 4.59e-15 | 17 |
indifferent gonad | 4.59e-15 | 17 |
testis | 9.85e-14 | 14 |
reproductive organ | 1.39e-13 | 24 |
male reproductive organ | 8.64e-13 | 15 |
reproductive structure | 1.82e-12 | 26 |
reproductive system | 1.82e-12 | 26 |
male organism | 5.78e-12 | 16 |
male reproductive system | 5.78e-12 | 16 |
body cavity | 1.78e-08 | 37 |
body cavity or lining | 1.78e-08 | 37 |
body cavity precursor | 3.16e-08 | 38 |
anatomical cavity | 5.45e-08 | 39 |