FFCP PHASE1:Mm9::chr8:93837275..93837287,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=244585|HGNC=|UniProt=G3X958|association_with_transcript=-114bp_to_ENSMUST00000047783_5end|description=CAGE_peak_2_at_Rpgrip1l_5end|id=chr8:93837275..93837287,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002102,1.60e-08,7;UBERON:0004710,1.60e-08,7;UBERON:0005419,1.60e-08,7;UBERON:0005417,1.60e-08,7;UBERON:0005729,1.60e-08,7;UBERON:0010708,2.16e-07,8|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0.422366166455,0.234064526321993,0.171217968225505,0,0.171200729931206,0,0.333109761815663,0.809901069559304,0.699561878128147,0.157731082679119,0.411343300817216,0.42438965179803,0.425216450755349,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0,0.612508068787107,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0.971020706062307,0,0,0,0,0,0,0.194429899074283,0,0,0.335565212115473,0.725362142011344,0.336093799142464,0.257259436035947,0,0,0.606949382578793,1.5869729378161,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0,0.135005938331691,0,0.571301968807607,0.662605622854841,0.122490799214954,0,0,0,0,0.307213066512487,0.131886287730194,0.182975287204819,0,0.279182999001381,0.56276261003168,0,0.883885756421003,1.56608848879013,0,0.075726193333184,0.151143120213571,0.869593466105033,0,0,0,0,0.448026887097336,0.280888840263504,0.170430322578058,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0,0.258937883647172,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0.452167921657868,0.117588707135705,0.125666591329675,0.741584903203122,0.578397427679647,0.884610551949874,0.808834249737046,0.662524555381181,0.484875253135222,0,0.878342391034642,0,0,0.718890747035522,0.599902730993408,0.254140454146129,0.149790639404823,0.457500602818626,0.879580464790051,0.173824320192276,0.767146371990992,0,0.324482526135515,0.305518091550949,0.497627882440372,0,1.05220927943237,1.17108398666433,0.919608417733892,1.0803727788321,0.452114453507145,0.748401490664606,0.640568601424249,0.655912071918102,0.776110112217047,0.646703978798527,1.51284864134255,2.11141348996739,3.06874025398605,1.39023624612799,0.348252166522167,2.46938563689532,0.796137067273973,0,0,0,0.828503090142008,0.469052119962192,0.36012412292203,0.946978942340841,0.590292695242212,0.308534225774757,0.232533944750408,0.268273401399619,0.350296027101508,0.16455984991348,0.492502392237286,0.243206428637567,0.292399974850665,0,0.268412837520744,0.420579897128254,0.205809224758569,0.330418782983798,0.264450566663544,0.426576501070468,0.696710015581316,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.456994050438915,0,0.203651327845314,0,0.280543279561274,0.252946148497029,0.147610147979602,0.31399745568275,0.123397163921801,0,0.667380422864376,0.982794975566015,0,0.608580364165509,0.241177159752417,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0,0.369506380333209,0.757965647081939,1.62964976442026,1.01847051465113,2.58159273117352,0.335012514883631,0.476087281772027,0.390267295715598,0.315270288212382,1.10732344824387,0,0.163863314715738,0,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0.481651769963376,0.820481806145422,0,0.252470927204373,0.315508219416257,0.390438744296638,0,0,0,0,0,0,0,0,0.567760340833074,0.534196811001766,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0.307435147943927,0.516856586336442,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.900305470156551,0,0,0.886701168211368,0.356737635204141,0.658196082408484,0,0.469343416127421,0.42366414172764,0,0.49465875882444,0.807322133479528,0.72375509913787,0.119372344003136,0.656563598980245,0.291480836629851,0.370850604021019,1.19609616558497,0.412773735926445,1.29636169158798,0.753473828018764,0.546776910884101,0.686334519619568,0.509935289981566,0.419854356970974,0.276399947608848,0,0.790839983952838,0.203319467126849,0.216010681643603,0.418176592028937,1.09181281873089,0.674321731924103,0.247960367176008,0,0.129614973291793,0,1.12738587736838,1.34564891439581,0.165458490457098,0.194451188344048,0.387479470433193,0.337912250981556,0.469428954583016,1.8228613878153,1.67774951081137,1.69108884578204,0.576060012515731,1.26404448251271,1.01362607645082,0.924398614483445,0.649604114888975,0.179026695667481,0.993406773906324,1.08175904567972,0.738447635872886,1.00966449948148,0.762068066549998,1.10908803650525,0.584747284438515,1.05833025804362,0.584384510907845,0.453460767230423,0,0.358855426437903,0.671538465456314,0.579568782096571,0.375364950902364,0.36630324853453,0.428736758158132,0,0.564751842617067,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,1.03787347584177,1.19707462020309,1.70733605754134,0.972426868273176,1.67690530102386,0.183843508450014,0.666740183404846,1.03017528619447,1.28367683836726,1.01078884705519,1.52087579934144,0.943131706930381,0.842773567228942,0.448176066834085,0.574354689556133,0.952587382566147,0.115884325944855,0.192909220463705,0.412085900803307,1.47198920134397,0.685738504770831,1.95223386775271,1.66905332963125,0.581385666529314,0.752875043322645,0.423073039458382,1.09756783723664,1.31534855718921,0.814824683075171,1.68342681497322,1.06771516311757,0.788035859004508,0,0.619747364743864,0.964533054905707,0,0.701794825336225,0.214871054048298,0.191288332068843,0.441182838239031,0.695603506861264|short_description=p2@Rpgrip1l}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:244585 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3X958 | |||
|association_with_transcript=-114bp_to_ENSMUST00000047783_5end | |||
|cluster_id=chr8:93837275..93837287,- | |||
|description=CAGE_peak_2_at_Rpgrip1l_5end | |||
|id=chr8:93837275..93837287,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002102,1.60e-08,7;UBERON:0004710,1.60e-08,7;UBERON:0005419,1.60e-08,7;UBERON:0005417,1.60e-08,7;UBERON:0005729,1.60e-08,7;UBERON:0010708,2.16e-07,8 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0.422366166455,0.234064526321993,0.171217968225505,0,0.171200729931206,0,0.333109761815663,0.809901069559304,0.699561878128147,0.157731082679119,0.411343300817216,0.42438965179803,0.425216450755349,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0,0.612508068787107,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0.971020706062307,0,0,0,0,0,0,0.194429899074283,0,0,0.335565212115473,0.725362142011344,0.336093799142464,0.257259436035947,0,0,0.606949382578793,1.5869729378161,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0,0.135005938331691,0,0.571301968807607,0.662605622854841,0.122490799214954,0,0,0,0,0.307213066512487,0.131886287730194,0.182975287204819,0,0.279182999001381,0.56276261003168,0,0.883885756421003,1.56608848879013,0,0.075726193333184,0.151143120213571,0.869593466105033,0,0,0,0,0.448026887097336,0.280888840263504,0.170430322578058,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0,0.258937883647172,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0.452167921657868,0.117588707135705,0.125666591329675,0.741584903203122,0.578397427679647,0.884610551949874,0.808834249737046,0.662524555381181,0.484875253135222,0,0.878342391034642,0,0,0.718890747035522,0.599902730993408,0.254140454146129,0.149790639404823,0.457500602818626,0.879580464790051,0.173824320192276,0.767146371990992,0,0.324482526135515,0.305518091550949,0.497627882440372,0,1.05220927943237,1.17108398666433,0.919608417733892,1.0803727788321,0.452114453507145,0.748401490664606,0.640568601424249,0.655912071918102,0.776110112217047,0.646703978798527,1.51284864134255,2.11141348996739,3.06874025398605,1.39023624612799,0.348252166522167,2.46938563689532,0.796137067273973,0,0,0,0.828503090142008,0.469052119962192,0.36012412292203,0.946978942340841,0.590292695242212,0.308534225774757,0.232533944750408,0.268273401399619,0.350296027101508,0.16455984991348,0.492502392237286,0.243206428637567,0.292399974850665,0,0.268412837520744,0.420579897128254,0.205809224758569,0.330418782983798,0.264450566663544,0.426576501070468,0.696710015581316,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.456994050438915,0,0.203651327845314,0,0.280543279561274,0.252946148497029,0.147610147979602,0.31399745568275,0.123397163921801,0,0.667380422864376,0.982794975566015,0,0.608580364165509,0.241177159752417,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0,0.369506380333209,0.757965647081939,1.62964976442026,1.01847051465113,2.58159273117352,0.335012514883631,0.476087281772027,0.390267295715598,0.315270288212382,1.10732344824387,0,0.163863314715738,0,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0.481651769963376,0.820481806145422,0,0.252470927204373,0.315508219416257,0.390438744296638,0,0,0,0,0,0,0,0,0.567760340833074,0.534196811001766,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0.307435147943927,0.516856586336442,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.900305470156551,0,0,0.886701168211368,0.356737635204141,0.658196082408484,0,0.469343416127421,0.42366414172764,0,0.49465875882444,0.807322133479528,0.72375509913787,0.119372344003136,0.656563598980245,0.291480836629851,0.370850604021019,1.19609616558497,0.412773735926445,1.29636169158798,0.753473828018764,0.546776910884101,0.686334519619568,0.509935289981566,0.419854356970974,0.276399947608848,0,0.790839983952838,0.203319467126849,0.216010681643603,0.418176592028937,1.09181281873089,0.674321731924103,0.247960367176008,0,0.129614973291793,0,1.12738587736838,1.34564891439581,0.165458490457098,0.194451188344048,0.387479470433193,0.337912250981556,0.469428954583016,1.8228613878153,1.67774951081137,1.69108884578204,0.576060012515731,1.26404448251271,1.01362607645082,0.924398614483445,0.649604114888975,0.179026695667481,0.993406773906324,1.08175904567972,0.738447635872886,1.00966449948148,0.762068066549998,1.10908803650525,0.584747284438515,1.05833025804362,0.584384510907845,0.453460767230423,0,0.358855426437903,0.671538465456314,0.579568782096571,0.375364950902364,0.36630324853453,0.428736758158132,0,0.564751842617067,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,1.03787347584177,1.19707462020309,1.70733605754134,0.972426868273176,1.67690530102386,0.183843508450014,0.666740183404846,1.03017528619447,1.28367683836726,1.01078884705519,1.52087579934144,0.943131706930381,0.842773567228942,0.448176066834085,0.574354689556133,0.952587382566147,0.115884325944855,0.192909220463705,0.412085900803307,1.47198920134397,0.685738504770831,1.95223386775271,1.66905332963125,0.581385666529314,0.752875043322645,0.423073039458382,1.09756783723664,1.31534855718921,0.814824683075171,1.68342681497322,1.06771516311757,0.788035859004508,0,0.619747364743864,0.964533054905707,0,0.701794825336225,0.214871054048298,0.191288332068843,0.441182838239031,0.695603506861264 | |||
|short_description=p2@Rpgrip1l | |||
}} |
Revision as of 08:16, 4 August 2015
Short description: | p2@Rpgrip1l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rpgrip1l_5end |
Coexpression cluster: | NA |
Association with transcript: | -114bp_to_ENSMUST00000047783_5end |
EntrezGene: | 244585 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
forelimb | 1.60e-08 | 7 |
pectoral appendage | 1.60e-08 | 7 |
pectoral appendage bud | 1.60e-08 | 7 |
forelimb bud | 1.60e-08 | 7 |
forelimb/pectoral fin field | 1.60e-08 | 7 |
pectoral complex | 2.16e-07 | 8 |