FFCP PHASE1:Mm9::chr11:87793257..87793275,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=234|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:87793257..87793275,-|id=chr11:87793257..87793275,-|ontology_enrichment_celltype=CL:0000117!1.35e-07!23;CL:0000337!1.35e-07!23;CL:0000393!2.88e-07!39;CL:0000211!2.88e-07!39|ontology_enrichment_celltype_v019_2=CL:0002614,2.87e-13,3;CL:0000117,6.55e-10,23;CL:0000337,6.55e-10,23;CL:0000540,2.58e-08,33;CL:0000047,2.58e-08,33;CL:0000031,2.58e-08,33;CL:0000404,2.58e-08,33;CL:0002319,1.69e-07,43;CL:0000221,2.72e-07,44;CL:0000133,2.72e-07,44;CL:0000393,7.99e-07,39;CL:0000211,7.99e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.20e-15!75;UBERON:0001016!1.20e-15!75;UBERON:0001017!1.39e-15!73;UBERON:0005743!1.39e-15!73;UBERON:0001049!8.02e-15!52;UBERON:0005068!8.02e-15!52;UBERON:0006241!8.02e-15!52;UBERON:0007135!8.02e-15!52;UBERON:0000955!2.28e-13!50;UBERON:0006238!2.28e-13!50;UBERON:0002616!5.82e-13!49;UBERON:0002346!9.73e-13!71;UBERON:0003075!9.73e-13!71;UBERON:0007284!9.73e-13!71;UBERON:0002020!2.34e-12!34;UBERON:0004121!3.81e-12!102;UBERON:0000924!3.81e-12!102;UBERON:0006601!3.81e-12!102;UBERON:0003080!6.56e-12!40;UBERON:0000033!7.78e-12!63;UBERON:0003056!1.54e-11!49;UBERON:0002780!1.55e-11!39;UBERON:0001890!1.55e-11!39;UBERON:0006240!1.55e-11!39;UBERON:0002791!1.87e-10!29;UBERON:0003528!1.87e-10!29;UBERON:0001893!1.87e-10!29;UBERON:0002021!5.69e-09!10;UBERON:0000411!5.69e-09!10;UBERON:0001950!5.69e-09!10;UBERON:0007811!8.93e-09!86;UBERON:0000153!1.55e-07!94;UBERON:0000025!1.61e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.40e-24,10;UBERON:0000411,1.40e-24,10;UBERON:0001950,1.40e-24,10;UBERON:0002020,8.07e-18,34;UBERON:0000073,4.67e-16,54;UBERON:0003528,4.42e-15,29;UBERON:0002791,4.42e-15,29;UBERON:0001893,4.42e-15,29;UBERON:0001017,1.88e-14,73;UBERON:0002619,5.20e-14,17;UBERON:0001016,5.56e-14,75;UBERON:0002038,2.87e-13,3;UBERON:0009663,2.87e-13,3;UBERON:0009661,2.87e-13,3;UBERON:0000125,2.87e-13,3;UBERON:0002308,2.87e-13,3;UBERON:0001049,1.17e-12,52;UBERON:0005068,1.17e-12,52;UBERON:0006241,1.17e-12,52;UBERON:0007135,1.17e-12,52;UBERON:0000956,3.96e-11,21;UBERON:0001869,3.96e-11,21;UBERON:0000203,3.96e-11,21;UBERON:0002780,1.01e-10,39;UBERON:0001890,1.01e-10,39;UBERON:0006240,1.01e-10,39;UBERON:0002616,1.61e-10,46;UBERON:0003080,2.09e-10,40;UBERON:0004121,2.34e-10,95;UBERON:0000924,2.34e-10,95;UBERON:0006601,2.34e-10,95;UBERON:0000955,3.00e-10,47;UBERON:0006238,3.00e-10,47;UBERON:0002950,4.58e-10,4;UBERON:0001891,4.58e-10,4;UBERON:0009616,4.58e-10,4;UBERON:0010286,4.58e-10,4;UBERON:0002346,8.37e-10,64;UBERON:0003075,8.37e-10,64;UBERON:0007284,8.37e-10,64;UBERON:0010371,2.81e-08,73;UBERON:0000025,3.64e-08,114;UBERON:0003056,3.85e-08,49;UBERON:0004111,2.06e-07,122;UBERON:0010314,4.52e-07,92|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0,0,0.140788722151667,0,0,0.0797721589953364,0,0,0,0,0,0.315462165358238,0,0.42438965179803,0.765389611359628,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.506884656097573,0.183546752161682,0,1.09012578190223,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0,1.05798195854407,0.633831403506179,0,0,0.899899717281399,0,0,0,0.768436610643109,0.103689612308478,0.540023753326763,0,0.571301968807607,1.32521124570968,0.122490799214954,0.575072826109418,0,0,1.14918604276669,1.0752457327937,0.263772575460388,0.823388792421687,0.52091337055676,1.67509799400829,7.87867654044352,5.19514042441154,0.589257170947335,1.70846016958924,0,0.075726193333184,0.0755715601067855,1.15945795480671,0,0,1.07940638327563,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0,0,0,0.230615497256059,0,0.23517741427141,0.125666591329675,0.494389935468748,0.144599356919912,0,0,0,0.484875253135222,0,0,0.209446706813455,0,0.11981512450592,0,0.127070227073065,0.299581278809645,0.457500602818626,0.502617408451458,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0,0.505445516867349,0.420883711772948,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0,0.281105173679186,0.258703370739016,0.215567992932842,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,1.07986979021165,0,0,0.233530684734339,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0,0,0,0,0,0,0.464473343720877,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0.898819408654221,0.432276099749388,0.199141273254367,0,0.114248512609729,0,0.407302655690628,0.193952487167626,0,0.0632365371242573,0,0.31399745568275,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,2.87536413054709,0,0,0.252578877947112,0.179397413521912,0,0.184753190166605,0,0,0,0.469380496577004,0,0,0.195133647857799,0,0,0,0,0.345369963731791,0,0,0,0,0.275936746304732,0.160550589987792,0.468846746368813,0,0.504941854408746,0,0,0.430846795465598,0.238968797952552,0,0.283076530788832,0,1.16902343164525,0,0.321321316421807,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0.712994756769443,0,0,1.03135543248187,0.340439605753788,0.18006109403131,0.258717367565509,0.214337035031592,0,0.356737635204141,0.493647061806363,0,0.469343416127421,0.63549621259146,0,0,0,0,0,0,0.291480836629851,0.927126510052548,0.170870880797853,0,0,0,0,0,0,0,0.138199973804424,0.954670618015114,0,0,0,0.209088296014469,0,0,0,0,0.129614973291793,0,0,0,0.496375471371293,0,0.258319646955462,0.337912250981556,0,0.13020438484395,0,0,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0.198681354781265,0,0,0,0.15241361331,0,0.292373642219257,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,2.25900737046827,2.30162618253588,1.14579102687879,2.749650917499,2.05524755931193,0.755393897389701,1.35004500046361,0.45032120322422,3.17199686288943,1.03552062350364,0.103787347584177,0,0,0,0,0.367687016900028,0,0.206035057238894,0.320919209591815,0,0,0,0,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0.25384382367503,0,0,0.271608227691724,0,0,0.0985044823755635,0,0.309873682371932,0,0,0,0,0,0,0|short_description=p@chr11:87793257..87793275,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=234 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:87793257..87793275,- | |||
|description=CAGE_peak_at_chr11:87793257..87793275,- | |||
|id=chr11:87793257..87793275,- | |||
|ontology_enrichment_celltype=CL:0000117!1.35e-07!23;CL:0000337!1.35e-07!23;CL:0000393!2.88e-07!39;CL:0000211!2.88e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,2.87e-13,3;CL:0000117,6.55e-10,23;CL:0000337,6.55e-10,23;CL:0000540,2.58e-08,33;CL:0000047,2.58e-08,33;CL:0000031,2.58e-08,33;CL:0000404,2.58e-08,33;CL:0002319,1.69e-07,43;CL:0000221,2.72e-07,44;CL:0000133,2.72e-07,44;CL:0000393,7.99e-07,39;CL:0000211,7.99e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.20e-15!75;UBERON:0001016!1.20e-15!75;UBERON:0001017!1.39e-15!73;UBERON:0005743!1.39e-15!73;UBERON:0001049!8.02e-15!52;UBERON:0005068!8.02e-15!52;UBERON:0006241!8.02e-15!52;UBERON:0007135!8.02e-15!52;UBERON:0000955!2.28e-13!50;UBERON:0006238!2.28e-13!50;UBERON:0002616!5.82e-13!49;UBERON:0002346!9.73e-13!71;UBERON:0003075!9.73e-13!71;UBERON:0007284!9.73e-13!71;UBERON:0002020!2.34e-12!34;UBERON:0004121!3.81e-12!102;UBERON:0000924!3.81e-12!102;UBERON:0006601!3.81e-12!102;UBERON:0003080!6.56e-12!40;UBERON:0000033!7.78e-12!63;UBERON:0003056!1.54e-11!49;UBERON:0002780!1.55e-11!39;UBERON:0001890!1.55e-11!39;UBERON:0006240!1.55e-11!39;UBERON:0002791!1.87e-10!29;UBERON:0003528!1.87e-10!29;UBERON:0001893!1.87e-10!29;UBERON:0002021!5.69e-09!10;UBERON:0000411!5.69e-09!10;UBERON:0001950!5.69e-09!10;UBERON:0007811!8.93e-09!86;UBERON:0000153!1.55e-07!94;UBERON:0000025!1.61e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.40e-24,10;UBERON:0000411,1.40e-24,10;UBERON:0001950,1.40e-24,10;UBERON:0002020,8.07e-18,34;UBERON:0000073,4.67e-16,54;UBERON:0003528,4.42e-15,29;UBERON:0002791,4.42e-15,29;UBERON:0001893,4.42e-15,29;UBERON:0001017,1.88e-14,73;UBERON:0002619,5.20e-14,17;UBERON:0001016,5.56e-14,75;UBERON:0002038,2.87e-13,3;UBERON:0009663,2.87e-13,3;UBERON:0009661,2.87e-13,3;UBERON:0000125,2.87e-13,3;UBERON:0002308,2.87e-13,3;UBERON:0001049,1.17e-12,52;UBERON:0005068,1.17e-12,52;UBERON:0006241,1.17e-12,52;UBERON:0007135,1.17e-12,52;UBERON:0000956,3.96e-11,21;UBERON:0001869,3.96e-11,21;UBERON:0000203,3.96e-11,21;UBERON:0002780,1.01e-10,39;UBERON:0001890,1.01e-10,39;UBERON:0006240,1.01e-10,39;UBERON:0002616,1.61e-10,46;UBERON:0003080,2.09e-10,40;UBERON:0004121,2.34e-10,95;UBERON:0000924,2.34e-10,95;UBERON:0006601,2.34e-10,95;UBERON:0000955,3.00e-10,47;UBERON:0006238,3.00e-10,47;UBERON:0002950,4.58e-10,4;UBERON:0001891,4.58e-10,4;UBERON:0009616,4.58e-10,4;UBERON:0010286,4.58e-10,4;UBERON:0002346,8.37e-10,64;UBERON:0003075,8.37e-10,64;UBERON:0007284,8.37e-10,64;UBERON:0010371,2.81e-08,73;UBERON:0000025,3.64e-08,114;UBERON:0003056,3.85e-08,49;UBERON:0004111,2.06e-07,122;UBERON:0010314,4.52e-07,92 | |||
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0,0,0.140788722151667,0,0,0.0797721589953364,0,0,0,0,0,0.315462165358238,0,0.42438965179803,0.765389611359628,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.506884656097573,0.183546752161682,0,1.09012578190223,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0,1.05798195854407,0.633831403506179,0,0,0.899899717281399,0,0,0,0.768436610643109,0.103689612308478,0.540023753326763,0,0.571301968807607,1.32521124570968,0.122490799214954,0.575072826109418,0,0,1.14918604276669,1.0752457327937,0.263772575460388,0.823388792421687,0.52091337055676,1.67509799400829,7.87867654044352,5.19514042441154,0.589257170947335,1.70846016958924,0,0.075726193333184,0.0755715601067855,1.15945795480671,0,0,1.07940638327563,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0,0,0,0.230615497256059,0,0.23517741427141,0.125666591329675,0.494389935468748,0.144599356919912,0,0,0,0.484875253135222,0,0,0.209446706813455,0,0.11981512450592,0,0.127070227073065,0.299581278809645,0.457500602818626,0.502617408451458,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0,0.505445516867349,0.420883711772948,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0,0.281105173679186,0.258703370739016,0.215567992932842,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,1.07986979021165,0,0,0.233530684734339,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0,0,0,0,0,0,0.464473343720877,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0.898819408654221,0.432276099749388,0.199141273254367,0,0.114248512609729,0,0.407302655690628,0.193952487167626,0,0.0632365371242573,0,0.31399745568275,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,2.87536413054709,0,0,0.252578877947112,0.179397413521912,0,0.184753190166605,0,0,0,0.469380496577004,0,0,0.195133647857799,0,0,0,0,0.345369963731791,0,0,0,0,0.275936746304732,0.160550589987792,0.468846746368813,0,0.504941854408746,0,0,0.430846795465598,0.238968797952552,0,0.283076530788832,0,1.16902343164525,0,0.321321316421807,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0.712994756769443,0,0,1.03135543248187,0.340439605753788,0.18006109403131,0.258717367565509,0.214337035031592,0,0.356737635204141,0.493647061806363,0,0.469343416127421,0.63549621259146,0,0,0,0,0,0,0.291480836629851,0.927126510052548,0.170870880797853,0,0,0,0,0,0,0,0.138199973804424,0.954670618015114,0,0,0,0.209088296014469,0,0,0,0,0.129614973291793,0,0,0,0.496375471371293,0,0.258319646955462,0.337912250981556,0,0.13020438484395,0,0,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0.198681354781265,0,0,0,0.15241361331,0,0.292373642219257,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,2.25900737046827,2.30162618253588,1.14579102687879,2.749650917499,2.05524755931193,0.755393897389701,1.35004500046361,0.45032120322422,3.17199686288943,1.03552062350364,0.103787347584177,0,0,0,0,0.367687016900028,0,0.206035057238894,0.320919209591815,0,0,0,0,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0.25384382367503,0,0,0.271608227691724,0,0,0.0985044823755635,0,0.309873682371932,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:87793257..87793275,- | |||
}} |
Latest revision as of 07:05, 4 August 2015
Short description: | p@chr11:87793257..87793275, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:87793257..87793275, - |
Coexpression cluster: | MCL_coexpression_mm9:234 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 2.87e-13 | 3 |
CNS neuron (sensu Vertebrata) | 6.55e-10 | 23 |
neuroblast (sensu Vertebrata) | 6.55e-10 | 23 |
neuron | 2.58e-08 | 33 |
neuronal stem cell | 2.58e-08 | 33 |
neuroblast | 2.58e-08 | 33 |
electrically signaling cell | 2.58e-08 | 33 |
neural cell | 1.69e-07 | 43 |
ectodermal cell | 2.72e-07 | 44 |
neurectodermal cell | 2.72e-07 | 44 |
electrically responsive cell | 7.99e-07 | 39 |
electrically active cell | 7.99e-07 | 39 |