FFCP PHASE1:Mm9::chr16:96303970..96303981,-: Difference between revisions
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{{FFCP|EntrezGene=93871|HGNC=|UniProt=Q921C3,E9Q420,Q3TSA7,Q8BPZ1|association_with_transcript=53bp_to_ENSMUST00000099502,NM_001103179,NM_145125,NM_176928,uc008aci.2,uc008ack.2,uc008acn.2_5end|description=CAGE_peak_6_at_Brwd1_5end|id=chr16:96303970..96303981,-|ontology_enrichment_celltype=CL:0000117!1.47e-09!23;CL:0000337!1.47e-09!23;CL:0000540!8.61e-07!33;CL:0000047!8.61e-07!33;CL:0000031!8.61e-07!33;CL:0000404!8.61e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.29e-13,23;CL:0000337,1.29e-13,23;CL:0000540,4.49e-08,33;CL:0000047,4.49e-08,33;CL:0000031,4.49e-08,33;CL:0000404,4.49e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!6.59e-14!63;UBERON:0001049!8.44e-14!52;UBERON:0005068!8.44e-14!52;UBERON:0006241!8.44e-14!52;UBERON:0007135!8.44e-14!52;UBERON:0002346!2.06e-13!71;UBERON:0003075!2.06e-13!71;UBERON:0007284!2.06e-13!71;UBERON:0002616!2.80e-13!49;UBERON:0000955!7.11e-13!50;UBERON:0006238!7.11e-13!50;UBERON:0003056!2.04e-12!49;UBERON:0001017!2.38e-12!73;UBERON:0005743!2.38e-12!73;UBERON:0002020!2.49e-12!34;UBERON:0000073!3.43e-11!75;UBERON:0001016!3.43e-11!75;UBERON:0007811!4.73e-11!86;UBERON:0003080!5.64e-11!40;UBERON:0002791!5.73e-11!29;UBERON:0003528!5.73e-11!29;UBERON:0001893!5.73e-11!29;UBERON:0002780!1.62e-10!39;UBERON:0001890!1.62e-10!39;UBERON:0006240!1.62e-10!39;UBERON:0004121!2.65e-10!102;UBERON:0000924!2.65e-10!102;UBERON:0006601!2.65e-10!102;UBERON:0000153!4.02e-10!94;UBERON:0000956!1.70e-07!21;UBERON:0001869!1.70e-07!21;UBERON:0000203!1.70e-07!21;UBERON:0002619!3.56e-07!17;UBERON:0002021!9.60e-07!10;UBERON:0000411!9.60e-07!10;UBERON:0001950!9.60e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.79e-26,54;UBERON:0001049,1.93e-24,52;UBERON:0005068,1.93e-24,52;UBERON:0006241,1.93e-24,52;UBERON:0007135,1.93e-24,52;UBERON:0001017,1.26e-22,73;UBERON:0001016,1.06e-21,75;UBERON:0002346,1.50e-20,64;UBERON:0003075,1.50e-20,64;UBERON:0007284,1.50e-20,64;UBERON:0002616,2.67e-20,46;UBERON:0000955,1.13e-19,47;UBERON:0006238,1.13e-19,47;UBERON:0002020,3.75e-19,34;UBERON:0003080,4.29e-17,40;UBERON:0004121,1.09e-16,95;UBERON:0000924,1.09e-16,95;UBERON:0006601,1.09e-16,95;UBERON:0010371,1.10e-16,73;UBERON:0003528,1.82e-16,29;UBERON:0002791,1.82e-16,29;UBERON:0001893,1.82e-16,29;UBERON:0002780,3.60e-16,39;UBERON:0001890,3.60e-16,39;UBERON:0006240,3.60e-16,39;UBERON:0003056,5.04e-15,49;UBERON:0002021,6.70e-13,10;UBERON:0000411,6.70e-13,10;UBERON:0001950,6.70e-13,10;UBERON:0010314,7.35e-12,92;UBERON:0002619,1.42e-11,17;UBERON:0000956,1.95e-10,21;UBERON:0001869,1.95e-10,21;UBERON:0000203,1.95e-10,21;UBERON:0003076,5.04e-08,12;UBERON:0003057,5.04e-08,12;UBERON:0002420,1.56e-07,8;UBERON:0007245,1.56e-07,8;UBERON:0010009,1.56e-07,8;UBERON:0010011,1.56e-07,8;UBERON:0000454,1.56e-07,8;UBERON:0000025,5.09e-07,114|phase1_expression=0.320297694209588,0,0,0.60492842261366,0,0.33575854382378,0.233612640595526,0.516493293766305,0.703943610758334,1.63845168425395,0.513653904676515,0.797721589953364,0.342401459862411,0.437102012094987,0.999329285446988,0.202475267389826,0,1.57731082679119,1.64537320326887,2.54633791078818,0.765389611359628,0.297872853602656,0,0,0,0.57423196411502,0,0.430942465371778,0,0.252030129759931,0.221730510655305,1.27006134691926,0,0,0.866554859253824,0.166234645358492,0,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0.218025156380447,0,0.58328969722285,0.279972843250725,0,1.00669563634642,1.45072428402269,0,0,0.286533439938757,0.515672092277442,2.22548106945558,2.11596391708813,2.53532561402472,0.338844532069132,0.889294796111139,0,0,0,0,0.384218305321555,0.518448061542388,0.945041568321835,0.420649922702764,1.42825492201902,0.441737081903227,0.979926393719632,0.766763768145891,6.43453150627015,2.20231761998777,1.53224805702225,1.84327839907492,2.1101806036831,1.09785172322892,1.56274011167028,1.3959149950069,2.25105044012672,1.98637722109853,1.17851434189467,1.42371680799103,1.1183966749518,0,0.151143120213571,0.869593466105033,0,0,0,0,0,0.140444420131752,0.340860645156116,0.259786004602869,0,0.985903938436763,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0,0.68510327831436,0.517875767294343,0.29688427812965,0.693941307064543,0.304465478312141,0.922461989024234,0.301445281105245,0.117588707135705,0.125666591329675,0.494389935468748,0.289198713839823,0.884610551949874,0.808834249737046,0.220841518460394,0,0,1.46390398505774,3.14170060220183,0,0.479260498023681,0,0.127070227073065,1.49790639404823,1.37250180845588,0.753926112677186,2.60736480288415,4.09144731728529,1.87009240103604,2.59586020908412,0.611036183101898,0.746441823660558,0.758168275301024,0.420883711772948,0.910843100738926,0.919608417733892,0.720248519221397,0.452114453507145,1.08858398642125,0.768682321709099,0.749613796477831,2.06962696591213,0.431135985865684,0.945530400839096,0.527853372491847,0.219195732427575,1.11218899690239,0,0,0.398068533636986,0,0,0.568326998791185,0.828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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:93871 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q921C3,uniprot:E9Q420,uniprot:Q3TSA7,uniprot:Q8BPZ1 | |||
|association_with_transcript=53bp_to_ENSMUST00000099502,NM_001103179,NM_145125,NM_176928,uc008aci.2,uc008ack.2,uc008acn.2_5end | |||
|cluster_id=chr16:96303970..96303981,- | |||
|description=CAGE_peak_6_at_Brwd1_5end | |||
|id=chr16:96303970..96303981,- | |||
|ontology_enrichment_celltype=CL:0000117!1.47e-09!23;CL:0000337!1.47e-09!23;CL:0000540!8.61e-07!33;CL:0000047!8.61e-07!33;CL:0000031!8.61e-07!33;CL:0000404!8.61e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.29e-13,23;CL:0000337,1.29e-13,23;CL:0000540,4.49e-08,33;CL:0000047,4.49e-08,33;CL:0000031,4.49e-08,33;CL:0000404,4.49e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!6.59e-14!63;UBERON:0001049!8.44e-14!52;UBERON:0005068!8.44e-14!52;UBERON:0006241!8.44e-14!52;UBERON:0007135!8.44e-14!52;UBERON:0002346!2.06e-13!71;UBERON:0003075!2.06e-13!71;UBERON:0007284!2.06e-13!71;UBERON:0002616!2.80e-13!49;UBERON:0000955!7.11e-13!50;UBERON:0006238!7.11e-13!50;UBERON:0003056!2.04e-12!49;UBERON:0001017!2.38e-12!73;UBERON:0005743!2.38e-12!73;UBERON:0002020!2.49e-12!34;UBERON:0000073!3.43e-11!75;UBERON:0001016!3.43e-11!75;UBERON:0007811!4.73e-11!86;UBERON:0003080!5.64e-11!40;UBERON:0002791!5.73e-11!29;UBERON:0003528!5.73e-11!29;UBERON:0001893!5.73e-11!29;UBERON:0002780!1.62e-10!39;UBERON:0001890!1.62e-10!39;UBERON:0006240!1.62e-10!39;UBERON:0004121!2.65e-10!102;UBERON:0000924!2.65e-10!102;UBERON:0006601!2.65e-10!102;UBERON:0000153!4.02e-10!94;UBERON:0000956!1.70e-07!21;UBERON:0001869!1.70e-07!21;UBERON:0000203!1.70e-07!21;UBERON:0002619!3.56e-07!17;UBERON:0002021!9.60e-07!10;UBERON:0000411!9.60e-07!10;UBERON:0001950!9.60e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.79e-26,54;UBERON:0001049,1.93e-24,52;UBERON:0005068,1.93e-24,52;UBERON:0006241,1.93e-24,52;UBERON:0007135,1.93e-24,52;UBERON:0001017,1.26e-22,73;UBERON:0001016,1.06e-21,75;UBERON:0002346,1.50e-20,64;UBERON:0003075,1.50e-20,64;UBERON:0007284,1.50e-20,64;UBERON:0002616,2.67e-20,46;UBERON:0000955,1.13e-19,47;UBERON:0006238,1.13e-19,47;UBERON:0002020,3.75e-19,34;UBERON:0003080,4.29e-17,40;UBERON:0004121,1.09e-16,95;UBERON:0000924,1.09e-16,95;UBERON:0006601,1.09e-16,95;UBERON:0010371,1.10e-16,73;UBERON:0003528,1.82e-16,29;UBERON:0002791,1.82e-16,29;UBERON:0001893,1.82e-16,29;UBERON:0002780,3.60e-16,39;UBERON:0001890,3.60e-16,39;UBERON:0006240,3.60e-16,39;UBERON:0003056,5.04e-15,49;UBERON:0002021,6.70e-13,10;UBERON:0000411,6.70e-13,10;UBERON:0001950,6.70e-13,10;UBERON:0010314,7.35e-12,92;UBERON:0002619,1.42e-11,17;UBERON:0000956,1.95e-10,21;UBERON:0001869,1.95e-10,21;UBERON:0000203,1.95e-10,21;UBERON:0003076,5.04e-08,12;UBERON:0003057,5.04e-08,12;UBERON:0002420,1.56e-07,8;UBERON:0007245,1.56e-07,8;UBERON:0010009,1.56e-07,8;UBERON:0010011,1.56e-07,8;UBERON:0000454,1.56e-07,8;UBERON:0000025,5.09e-07,114 | |||
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| |||
|short_description=p6@Brwd1 | |||
}} |
Revision as of 06:26, 4 August 2015
Short description: | p6@Brwd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Brwd1_5end |
Coexpression cluster: | NA |
Association with transcript: | 53bp_to_ENSMUST00000099502, NM_001103179, NM_145125, NM_176928, uc008aci.2, uc008ack.2, uc008acn.2_5end |
EntrezGene: | 93871 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.29e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.29e-13 | 23 |
neuron | 4.49e-08 | 33 |
neuronal stem cell | 4.49e-08 | 33 |
neuroblast | 4.49e-08 | 33 |
electrically signaling cell | 4.49e-08 | 33 |