FFCP PHASE1:Mm9::chr10:23869097..23869182,+: Difference between revisions
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{{FFCP|EntrezGene=53331|HGNC=|UniProt=Q8BH40|association_with_transcript=0bp_to_ENSMUST00000020174,NM_016797,uc007eqs.1,uc007eqt.1_5end|description=CAGE_peak_1_at_Stx7_5end|id=chr10:23869097..23869182,+|ontology_enrichment_celltype=CL:0000393!8.57e-12!39;CL:0000211!8.57e-12!39;CL:0000117!3.83e-11!23;CL:0000337!3.83e-11!23;CL:0000540!5.47e-11!33;CL:0000047!5.47e-11!33;CL:0000031!5.47e-11!33;CL:0000404!5.47e-11!33;CL:0000055!1.25e-08!50;CL:0000221!5.12e-08!44;CL:0000133!5.12e-08!44;CL:0002321!6.36e-08!70;CL:0000220!6.36e-08!70;CL:0002319!8.11e-08!43|ontology_enrichment_celltype_v019_2=CL:0000393,8.57e-12,39;CL:0000211,8.57e-12,39;CL:0000117,3.83e-11,23;CL:0000337,3.83e-11,23;CL:0000540,5.47e-11,33;CL:0000047,5.47e-11,33;CL:0000031,5.47e-11,33;CL:0000404,5.47e-11,33;CL:0000221,5.12e-08,44;CL:0000133,5.12e-08,44;CL:0002321,6.36e-08,70;CL:0002319,8.11e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!8.97e-15!34;UBERON:0000073!9.21e-15!75;UBERON:0001016!9.21e-15!75;UBERON:0001017!2.88e-14!73;UBERON:0005743!2.88e-14!73;UBERON:0002791!4.04e-12!29;UBERON:0003528!4.04e-12!29;UBERON:0001893!4.04e-12!29;UBERON:0001049!8.83e-12!52;UBERON:0005068!8.83e-12!52;UBERON:0006241!8.83e-12!52;UBERON:0007135!8.83e-12!52;UBERON:0004121!4.85e-11!102;UBERON:0000924!4.85e-11!102;UBERON:0006601!4.85e-11!102;UBERON:0000955!2.80e-10!50;UBERON:0006238!2.80e-10!50;UBERON:0002616!5.22e-10!49;UBERON:0002346!1.52e-09!71;UBERON:0003075!1.52e-09!71;UBERON:0007284!1.52e-09!71;UBERON:0003080!2.23e-09!40;UBERON:0002780!5.78e-09!39;UBERON:0001890!5.78e-09!39;UBERON:0006240!5.78e-09!39;UBERON:0000033!1.46e-08!63;UBERON:0000956!1.79e-08!21;UBERON:0001869!1.79e-08!21;UBERON:0000203!1.79e-08!21;UBERON:0002619!2.84e-07!17;UBERON:0003056!3.41e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002020,8.97e-15,34;UBERON:0001016,9.21e-15,75;UBERON:0001017,2.88e-14,73;UBERON:0000073,2.21e-12,54;UBERON:0003528,4.04e-12,29;UBERON:0002791,4.04e-12,29;UBERON:0001893,4.04e-12,29;UBERON:0001049,8.83e-12,52;UBERON:0005068,8.83e-12,52;UBERON:0006241,8.83e-12,52;UBERON:0007135,8.83e-12,52;UBERON:0004121,4.32e-11,95;UBERON:0000924,4.32e-11,95;UBERON:0006601,4.32e-11,95;UBERON:0002346,8.73e-10,64;UBERON:0003075,8.73e-10,64;UBERON:0007284,8.73e-10,64;UBERON:0003080,2.23e-09,40;UBERON:0000955,2.87e-09,47;UBERON:0006238,2.87e-09,47;UBERON:0002616,5.26e-09,46;UBERON:0002780,5.78e-09,39;UBERON:0001890,5.78e-09,39;UBERON:0006240,5.78e-09,39;UBERON:0000956,1.79e-08,21;UBERON:0001869,1.79e-08,21;UBERON:0000203,1.79e-08,21;UBERON:0010314,1.71e-07,92;UBERON:0002619,2.84e-07,17;UBERON:0010371,2.86e-07,73;UBERON:0003056,3.41e-07,49|phase1_expression=65.1805807716511,168.206146482172,149.239750519768,181.176062572791,180.823358510631,88.304497025654,96.9492458471432,32.6682008307188,5.63154888606667,7.49006484230379,5.13653904676515,5.18519033469687,23.6257007305064,21.1557373853974,35.6427445142759,39.2802018736262,27.9824751251259,110.254026792704,103.247168505121,91.2437751365765,81.641558545027,46.0710013572108,64.2551481281781,153.272741036084,137.645568640302,143.557991028755,142.582220728654,142.211013572687,175.961686416602,146.68153552028,124.612546988281,12.7006134691926,5.53558308826113,0,45.3497043009501,49.7041589621892,36.9546534834888,238.144497889301,210.960543021426,180.092167926987,238.233752652561,207.645827427367,219.450679570081,133.072936600185,120.233040426344,101.50135394541,26.6013057078333,52.5440626876876,59.5349555210419,74.4666513454505,78.1124232669523,74.7513334697852,88.9247812106003,24.6623128283857,20.5017217476903,96.7295479495161,97.707903019116,131.496383530748,200.090979790142,209.480427791725,236.419113507805,51.5043688745081,45.3540346016681,92.6896708799841,96.9089035315635,95.2043354027774,55.1264203353865,45.3377600279434,120.798398339376,129.875712675086,147.017147984616,149.966766811997,175.369621515581,165.607560538618,123.257275729452,185.682194895224,178.38772721901,127.687338085188,150.841615657631,231.987980117411,211.336456721566,240.661977197223,132.891107524657,140.69065250792,145.6167301313,197.990409438305,187.930618654816,230.576114485897,96.6266226931428,155.526270699765,114.206608548461,74.8568772973806,30.5987100168488,34.5410042648203,48.0834548911275,36.7382047419815,73.8737649893015,139.241573546273,144.700804563798,130.382302994316,123.660522563925,155.275037671325,101.922095882658,63.9960032837998,132.925499180885,122.879534755423,129.414257923785,88.1499551431143,129.98681759088,142.207569224102,51.1781713960101,80.6833517527174,73.3357281274266,85.7611824744422,76.079893516801,99.904940107092,296.881156248983,81.9878353735899,99.0763818183859,57.2654648813828,65.5899309827369,60.6094066419028,119.290727179598,110.671141270365,91.9471042911068,138.457723923057,44.3315960671905,56.3908567133803,51.5905121916643,168.96384124864,144.570190490686,213.361089887644,184.77525236439,155.219282599511,157.087761687027,142.610070236559,67.926855688161,83.35267030876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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:53331 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BH40 | |||
|association_with_transcript=0bp_to_ENSMUST00000020174,NM_016797,uc007eqs.1,uc007eqt.1_5end | |||
|cluster_id=chr10:23869097..23869182,+ | |||
|description=CAGE_peak_1_at_Stx7_5end | |||
|id=chr10:23869097..23869182,+ | |||
|ontology_enrichment_celltype=CL:0000393!8.57e-12!39;CL:0000211!8.57e-12!39;CL:0000117!3.83e-11!23;CL:0000337!3.83e-11!23;CL:0000540!5.47e-11!33;CL:0000047!5.47e-11!33;CL:0000031!5.47e-11!33;CL:0000404!5.47e-11!33;CL:0000055!1.25e-08!50;CL:0000221!5.12e-08!44;CL:0000133!5.12e-08!44;CL:0002321!6.36e-08!70;CL:0000220!6.36e-08!70;CL:0002319!8.11e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,8.57e-12,39;CL:0000211,8.57e-12,39;CL:0000117,3.83e-11,23;CL:0000337,3.83e-11,23;CL:0000540,5.47e-11,33;CL:0000047,5.47e-11,33;CL:0000031,5.47e-11,33;CL:0000404,5.47e-11,33;CL:0000221,5.12e-08,44;CL:0000133,5.12e-08,44;CL:0002321,6.36e-08,70;CL:0002319,8.11e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!8.97e-15!34;UBERON:0000073!9.21e-15!75;UBERON:0001016!9.21e-15!75;UBERON:0001017!2.88e-14!73;UBERON:0005743!2.88e-14!73;UBERON:0002791!4.04e-12!29;UBERON:0003528!4.04e-12!29;UBERON:0001893!4.04e-12!29;UBERON:0001049!8.83e-12!52;UBERON:0005068!8.83e-12!52;UBERON:0006241!8.83e-12!52;UBERON:0007135!8.83e-12!52;UBERON:0004121!4.85e-11!102;UBERON:0000924!4.85e-11!102;UBERON:0006601!4.85e-11!102;UBERON:0000955!2.80e-10!50;UBERON:0006238!2.80e-10!50;UBERON:0002616!5.22e-10!49;UBERON:0002346!1.52e-09!71;UBERON:0003075!1.52e-09!71;UBERON:0007284!1.52e-09!71;UBERON:0003080!2.23e-09!40;UBERON:0002780!5.78e-09!39;UBERON:0001890!5.78e-09!39;UBERON:0006240!5.78e-09!39;UBERON:0000033!1.46e-08!63;UBERON:0000956!1.79e-08!21;UBERON:0001869!1.79e-08!21;UBERON:0000203!1.79e-08!21;UBERON:0002619!2.84e-07!17;UBERON:0003056!3.41e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,8.97e-15,34;UBERON:0001016,9.21e-15,75;UBERON:0001017,2.88e-14,73;UBERON:0000073,2.21e-12,54;UBERON:0003528,4.04e-12,29;UBERON:0002791,4.04e-12,29;UBERON:0001893,4.04e-12,29;UBERON:0001049,8.83e-12,52;UBERON:0005068,8.83e-12,52;UBERON:0006241,8.83e-12,52;UBERON:0007135,8.83e-12,52;UBERON:0004121,4.32e-11,95;UBERON:0000924,4.32e-11,95;UBERON:0006601,4.32e-11,95;UBERON:0002346,8.73e-10,64;UBERON:0003075,8.73e-10,64;UBERON:0007284,8.73e-10,64;UBERON:0003080,2.23e-09,40;UBERON:0000955,2.87e-09,47;UBERON:0006238,2.87e-09,47;UBERON:0002616,5.26e-09,46;UBERON:0002780,5.78e-09,39;UBERON:0001890,5.78e-09,39;UBERON:0006240,5.78e-09,39;UBERON:0000956,1.79e-08,21;UBERON:0001869,1.79e-08,21;UBERON:0000203,1.79e-08,21;UBERON:0010314,1.71e-07,92;UBERON:0002619,2.84e-07,17;UBERON:0010371,2.86e-07,73;UBERON:0003056,3.41e-07,49 | |||
|phase1_expression=65.1805807716511,168.206146482172,149.239750519768,181.176062572791,180.823358510631,88.304497025654,96.9492458471432,32.6682008307188,5.63154888606667,7.49006484230379,5.13653904676515,5.18519033469687,23.6257007305064,21.1557373853974,35.6427445142759,39.2802018736262,27.9824751251259,110.254026792704,103.247168505121,91.2437751365765,81.641558545027,46.0710013572108,64.2551481281781,153.272741036084,137.645568640302,143.557991028755,142.582220728654,142.211013572687,175.961686416602,146.68153552028,124.612546988281,12.7006134691926,5.53558308826113,0,45.3497043009501,49.7041589621892,36.9546534834888,238.144497889301,210.960543021426,180.092167926987,238.233752652561,207.645827427367,219.450679570081,133.072936600185,120.233040426344,101.50135394541,26.6013057078333,52.5440626876876,59.5349555210419,74.4666513454505,78.1124232669523,74.7513334697852,88.9247812106003,24.6623128283857,20.5017217476903,96.7295479495161,97.707903019116,131.496383530748,200.090979790142,209.480427791725,236.419113507805,51.5043688745081,45.3540346016681,92.6896708799841,96.9089035315635,95.2043354027774,55.1264203353865,45.3377600279434,120.798398339376,129.875712675086,147.017147984616,149.966766811997,175.369621515581,165.607560538618,123.257275729452,185.682194895224,178.38772721901,127.687338085188,150.841615657631,231.987980117411,211.336456721566,240.661977197223,132.891107524657,140.69065250792,145.6167301313,197.990409438305,187.930618654816,230.576114485897,96.6266226931428,155.526270699765,114.206608548461,74.8568772973806,30.5987100168488,34.5410042648203,48.0834548911275,36.7382047419815,73.8737649893015,139.241573546273,144.700804563798,130.382302994316,123.660522563925,155.275037671325,101.922095882658,63.9960032837998,132.925499180885,122.879534755423,129.414257923785,88.1499551431143,129.98681759088,142.207569224102,51.1781713960101,80.6833517527174,73.3357281274266,85.7611824744422,76.079893516801,99.904940107092,296.881156248983,81.9878353735899,99.0763818183859,57.2654648813828,65.5899309827369,60.6094066419028,119.290727179598,110.671141270365,91.9471042911068,138.457723923057,44.3315960671905,56.3908567133803,51.5905121916643,168.96384124864,144.570190490686,213.361089887644,184.77525236439,155.219282599511,157.087761687027,142.610070236559,67.926855688161,83.3526703087623,132.932170936113,113.638602178696,34.4819173851165,52.1877777063984,69.6840442346702,66.7622343012218,59.5319367574119,73.0248205623644,63.1549623532572,98.565984251565,22.8502072508813,37.8212160335639,40.8206608060361,47.3462782043562,49.770457611382,47.0140424804925,54.738048284513,42.394298832339,59.688120921625,59.9620623577286,66.4942588585687,61.7234802155796,59.5696192351984,62.3014732655111,61.5536312521547,62.374261463927,56.6160304296678,64.1793687511126,79.1406534128877,62.70298885117,67.3049786146135,61.2344641015025,65.5035981130514,69.5911940144582,84.0876941564724,81.8659154438268,145.100064509248,213.424166074636,254.092044114541,125.34956859852,43.2975148586525,51.5565411530173,65.4646703516234,91.7660037036209,117.860363237781,171.203063501303,119.106794447672,172.769203505487,144.266409851355,151.803788167398,156.556161956653,110.554787264469,138.544489969679,137.009195999005,49.1239863468482,56.3245167165963,86.7849564682719,89.8102355797836,105.122248044853,113.760299862097,150.692667967105,181.70809216289,190.439456871588,185.71273170231,43.874988808898,33.3690211432188,35.7737371106029,34.6287653072675,39.1520034279811,42.9295344359302,43.5410206546228,62.1423656893751,41.6687532811841,49.9701772002308,43.1304619582064,61.0311154176346,56.79085650685,59.8611940734655,52.5634421619203,43.9023604440664,162.952313726945,40.3616707071133,44.9783334979991,47.0193887597271,54.682827851221,71.1901594127717,84.2674488736489,92.103081788881,110.344600874334,101.873757238436,119.591076493115,114.376593671585,116.907732723211,128.014416844638,182.457453566519,285.550484004823,65.4046483115318,64.5691986353074,172.591884236876,150.968652330758,64.2624985876568,54.2812493489402,97.4920397996233,87.458278722447,109.435086048262,102.278645523692,116.078109196927,130.215204162863,93.1064613852257,97.0289448265555,109.890002269134,134.312310264315,77.3573464385064,45.5847945388173,61.4083836762982,87.5991352984163,35.84118735179,35.6887535147823,33.8602383800521,37.1552007119119,36.0268309314543,58.7201132572901,77.5284879504663,43.2605138078232,44.2056749197054,46.457403416565,46.3841877729995,39.191506434311,108.600234235458,46.2757011660467,41.9122135456125,58.0853364935615,70.4040727559826,62.6074549783268,69.9333337559014,46.5831372145337,54.2091645627171,82.6145076368899,99.2377791247329,54.0826909648055,45.2100394748536,45.3553195459732,39.1541288330288,44.8104656304017,126.794163933985,178.749991138131,64.0765802991948,53.4541988024746,55.1879691561741,48.4106934502056,52.6272776725947,60.854994072935,36.8853193086666,37.3670377704167,33.1679937130617,162.294005062569,38.7511592136891,56.5228118612639,6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| |||
|short_description=p1@Stx7 | |||
}} |
Revision as of 06:24, 4 August 2015
Short description: | p1@Stx7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Stx7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000020174, NM_016797, uc007eqs.1, uc007eqt.1_5end |
EntrezGene: | 53331 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 8.57e-12 | 39 |
electrically active cell | 8.57e-12 | 39 |
CNS neuron (sensu Vertebrata) | 3.83e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.83e-11 | 23 |
neuron | 5.47e-11 | 33 |
neuronal stem cell | 5.47e-11 | 33 |
neuroblast | 5.47e-11 | 33 |
electrically signaling cell | 5.47e-11 | 33 |
ectodermal cell | 5.12e-08 | 44 |
neurectodermal cell | 5.12e-08 | 44 |
embryonic cell | 6.36e-08 | 70 |
neural cell | 8.11e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
gray matter | 8.97e-15 | 34 |
nervous system | 9.21e-15 | 75 |
central nervous system | 2.88e-14 | 73 |
regional part of nervous system | 2.21e-12 | 54 |
brain grey matter | 4.04e-12 | 29 |
regional part of telencephalon | 4.04e-12 | 29 |
telencephalon | 4.04e-12 | 29 |
neural tube | 8.83e-12 | 52 |
neural rod | 8.83e-12 | 52 |
future spinal cord | 8.83e-12 | 52 |
neural keel | 8.83e-12 | 52 |
ectoderm-derived structure | 4.32e-11 | 95 |
ectoderm | 4.32e-11 | 95 |
presumptive ectoderm | 4.32e-11 | 95 |
neurectoderm | 8.73e-10 | 64 |
neural plate | 8.73e-10 | 64 |
presumptive neural plate | 8.73e-10 | 64 |
anterior neural tube | 2.23e-09 | 40 |
brain | 2.87e-09 | 47 |
future brain | 2.87e-09 | 47 |
regional part of brain | 5.26e-09 | 46 |
regional part of forebrain | 5.78e-09 | 39 |
forebrain | 5.78e-09 | 39 |
future forebrain | 5.78e-09 | 39 |
cerebral cortex | 1.79e-08 | 21 |
cerebral hemisphere | 1.79e-08 | 21 |
pallium | 1.79e-08 | 21 |
structure with developmental contribution from neural crest | 1.71e-07 | 92 |
regional part of cerebral cortex | 2.84e-07 | 17 |
ecto-epithelium | 2.86e-07 | 73 |
pre-chordal neural plate | 3.41e-07 | 49 |