FFCP PHASE1:Mm9::chr14:32898990..32899051,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=218885|HGNC=|UniProt=E9Q690,E9PZL5,E9Q8U8|association_with_transcript=0bp_to_ENSMUST00000164868,ENSMUST00000168986,ENSMUST00000169078,ENSMUST00000170600_5end|description=CAGE_peak_1_at_Oxnad1_5end|id=chr14:32898990..32899051,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!1.62e-16!47;UBERON:0007100!4.35e-11!18;UBERON:0000948!4.35e-11!18;UBERON:0005498!4.35e-11!18;UBERON:0004140!4.35e-11!18;UBERON:0009881!4.35e-11!18;UBERON:0004141!4.35e-11!18;UBERON:0003084!4.35e-11!18;UBERON:0007005!4.35e-11!18;UBERON:0004139!4.35e-11!18;UBERON:0004291!4.35e-11!18;UBERON:0003103!8.09e-10!43;UBERON:0005172!8.31e-10!49;UBERON:0005173!8.31e-10!49;UBERON:0002417!8.31e-10!49;UBERON:0000916!8.31e-10!49;UBERON:0002107!1.17e-09!22;UBERON:0007499!1.17e-09!22;UBERON:0006925!1.17e-09!22;UBERON:0009497!1.17e-09!22;UBERON:0000015!1.17e-09!22;UBERON:0002423!1.17e-09!22;UBERON:0006235!1.17e-09!22;UBERON:0008835!1.17e-09!22;UBERON:0003894!1.17e-09!22;UBERON:0004161!1.17e-09!22;UBERON:0008836!1.17e-09!22;UBERON:0004535!3.25e-09!23;UBERON:0001009!3.25e-09!23;UBERON:0002365!5.57e-09!25;UBERON:0002330!5.57e-09!25;UBERON:0009854!7.00e-09!23;UBERON:0009856!7.00e-09!23;UBERON:0005256!1.48e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.62e-16,47;UBERON:0007100,4.35e-11,18;UBERON:0000948,4.35e-11,18;UBERON:0005498,4.35e-11,18;UBERON:0004140,4.35e-11,18;UBERON:0009881,4.35e-11,18;UBERON:0004141,4.35e-11,18;UBERON:0003084,4.35e-11,18;UBERON:0007005,4.35e-11,18;UBERON:0004139,4.35e-11,18;UBERON:0004291,4.35e-11,18;UBERON:0003103,8.09e-10,43;UBERON:0005172,8.31e-10,49;UBERON:0005173,8.31e-10,49;UBERON:0002417,8.31e-10,49;UBERON:0000916,8.31e-10,49;UBERON:0002107,1.17e-09,22;UBERON:0007499,1.17e-09,22;UBERON:0006925,1.17e-09,22;UBERON:0009497,1.17e-09,22;UBERON:0000015,1.17e-09,22;UBERON:0002423,1.17e-09,22;UBERON:0006235,1.17e-09,22;UBERON:0008835,1.17e-09,22;UBERON:0003894,1.17e-09,22;UBERON:0004161,1.17e-09,22;UBERON:0008836,1.17e-09,22;UBERON:0004535,3.25e-09,23;UBERON:0001009,3.25e-09,23;UBERON:0003104,4.00e-09,61;UBERON:0009142,4.00e-09,61;UBERON:0002365,5.57e-09,25;UBERON:0002330,5.57e-09,25;UBERON:0009854,7.00e-09,23;UBERON:0009856,7.00e-09,23;UBERON:0005256,1.31e-07,45|phase1_expression=9.12848428497326,9.07336059862339,10.9199817453489,6.65421264875026,7.51343594919521,9.9048770428015,11.9142446703718,11.879345756625,3.09735188733667,4.21316147379588,3.4243593645101,4.46724090373884,4.96482116800497,4.80812213304486,8.99396356902289,7.49158489342356,6.99561878128147,3.47008381894061,2.87940310572051,4.2438965179803,6.88850650223665,14.1986060217266,15.6719873483361,24.1588558418044,16.0586496747019,10.3361753540704,14.6459078694085,13.7901588918969,7.03086651988583,14.8697776558359,11.5299865540758,34.2916563668201,23.9875267157982,15.8481681015439,21.9527231010969,24.9351968037739,24.2961533952219,10.4632907684227,7.813353445238,8.37637990358077,67.0583896355356,17.7591826089196,2.42755176515577,4.15459499319405,3.24406179902447,6.24058957349717,3.12956537739216,3.70642765846759,9.88587822305123,7.77719596297134,5.03951117851305,5.75010257459886,2.85230430298152,2.17608642603403,2.35265659399725,18.2654199585522,20.3438742356517,23.2052441524849,3.03474691289397,2.11596391708813,4.43681982454325,5.42151251310611,7.11435836888911,1.7997994345628,0.988866362566974,1.4209602298922,5.69240209984969,6.53171119046643,3.42175720617976,4.99521971827255,2.3135745748652,7.14127461009509,7.95126747425809,3.30725157880376,2.87536413054709,1.83843757322004,8.8092704799511,6.12899222808901,6.29786786350598,3.95658863190582,4.66586982372289,4.68822033501084,6.97957497503452,9.56696437053856,5.80633341551878,6.48182888042069,8.11518580554887,6.52398060388552,2.27178579999552,4.91215140694106,52.175607966302,25.8127163094416,31.9586526842643,25.3660500069774,30.5394916200404,27.7776670000348,18.2577746171277,3.06774580640504,4.41636207824877,3.88673531961374,9.15482228548423,1.28326477414318,0,0,12.3399893376392,11.6545538118545,14.6602089054287,12.3318590096585,4.14300613835475,9.79718117827843,14.5727674483554,16.1366703505435,11.761390360059,12.0578112442098,8.70156432804216,15.2056575508907,16.0676729027343,46.5609929282116,4.42305275974937,6.63244084784378,8.83366073841574,8.727754556434,5.59175283654366,8.78342391034641,8.58731497935166,9.96282515313506,7.42853771936706,8.99854096490112,11.0551097553566,7.04016005202667,2.74500361691176,2.51308704225729,4.17178368461463,4.85859368927628,5.194701113989,4.38051410282946,11.915205570487,7.0911973247753,7.07623723614289,93.8570677253674,6.8963834770233,6.20735681970377,6.84236093260327,6.78171680260718,5.51095643125756,5.50888997224854,4.02917415606834,43.4621662841546,7.54487975264948,4.72765200419548,6.33424046990216,7.23345917010997,5.00485048606076,5.57203466435466,2.05782136407943,12.1410902759281,10.5331978096985,7.97778512055617,8.24074148247219,15.3273071676271,19.465662978431,16.7457717158744,21.0702814670837,19.6764231747404,24.2199367233184,21.3931229170375,23.6080593231665,16.6974439585052,28.1397343352052,36.1168420974009,34.6974504856263,45.0295961270024,39.2994706370981,31.8069212462081,3.36463917702604,5.35103984372279,17.1817767151575,12.164726066523,7.67837701926842,8.82499353069666,16.2373001265838,15.5296313959974,12.2307924114679,19.403013863481,9.49058123089023,12.8465184684728,9.55073793441024,10.3457365461398,8.57841983324129,9.88701349519644,10.8069024937347,10.9527700289902,17.8287826895897,12.9100819248994,19.1603150644237,11.4044743593376,12.9948166402309,7.43439690837377,10.1178459398812,16.2371162777562,18.0548537017581,21.7179008502369,14.8226313543574,16.6845105716094,15.1350426237166,15.0657615297852,10.7515864335907,10.1294407096015,10.4396599230382,12.083237772934,10.2145192868272,15.6500005517206,15.814502718009,14.8856379067401,20.9065240986756,22.9846778931872,33.9061111556414,21.7099584613515,2.21703828199926,7.20067364727842,9.4519686336375,7.97801903143384,7.27539769694356,5.19269398069629,3.80869825417622,4.29294025287157,3.94087860265477,3.98636441367795,2.55127629851979,3.93271955317771,2.76295970985433,2.89298117163023,0,1.63171705145613,9.83528546038072,11.0374698521893,4.97706828962155,7.85318300167761,4.42624352517024,14.1383719234449,8.20321370482267,12.8844785617891,7.75524231838076,6.21318874676635,7.35235624471901,5.09537755419898,6.47697122679831,11.9824901743638,8.69633111482352,5.46246237917072,8.65834519770439,18.3407571777273,16.4515828947112,7.25868541079156,0,8.74010290157933,8.46505959501303,10.7504895460862,8.26845300066164,7.68587869859819,7.49442050187841,12.3601468022352,9.62542921638748,6.32073515871632,4.21674434299995,4.12542172992747,9.19186935535228,6.30213829109586,8.5376731296618,8.14480733120051,6.7389288784064,6.77801506887868,8.39200005070817,11.5696680663548,7.50949465803873,4.87213762986786,10.1443063105282,2.30840754118072,5.65125493435669,5.48847616846218,5.72987251215055,3.61109979439135,13.1166376483433,6.86073617438886,4.78438466233988,7.42992724667601,10.3708935327039,5.65105371014073,7.65487675237741,6.17701067657611,9.34881364966204,8.25713568709582,8.153798454461,19.0934123603023,7.43389584915668,8.13277868507395,11.5565714679327,9.40897332065109,12.4466661335321,8.63131816862852,8.43065248398426,7.32916637555283,13.2207272757629,6.21339313086926,3.38215763210514,8.97099276263873,10.7548018797113,9.13920585217024,8.91202781996345,7.43406952159424,8.09764946655702,6.51021924219751,7.7595914875026,2.89900944991207,6.91272015018877,2.8441000856536,12.3662381327,12.5307367741089,10.2637450152458,7.87717460936918,8.14593554603186,6.61074972359829,9.30444021199837,6.25991989678515,4.72482201260999,4.63800451629466,4.19068887180935,4.81059208201647,3.97381467417334,12.923631866067,7.76950836809226,11.5730875026224,10.4088462145729,7.72758376128762,6.75656911624255,3.6630324853453,3.21552568618599,6.01886524842436,5.0827665835536,4.14292712856459,4.58316410751517,6.01486138202907,2.05524755931193,3.7769694869485,4.72515750162264,4.5032120322422,8.60970577069989,2.5888015587591,6.2272408550506,5.98537310101547,7.17081144167364,10.4535888339366,8.17491334249131,9.19217542250071,12.4458167568905,10.7138229764225,9.62757628775446,10.8659801058433,8.87177549615839,9.99719609346204,12.0797544636148,9.41169740351578,12.6358031702349,9.52587382566147,12.051969898265,10.0312794641127,9.89006161927936,9.71512872887022,10.9718160763333,11.0034999818789,10.4911923576821,11.046327664057,12.4224382148236,12.4383473600764,12.8049581010941,14.4688341290814,8.96307151382688,10.1005608898393,10.4398815949273,12.0175468498187,9.82154503607254,9.29621047115796,10.2240503820005,5.49583271463481,11.462648813825,7.73535794573874,7.07766828654721,8.16188250742207,19.0131625208746|short_description=p1@Oxnad1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:218885 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q690,uniprot:E9PZL5,uniprot:E9Q8U8 | |||
|association_with_transcript=0bp_to_ENSMUST00000164868,ENSMUST00000168986,ENSMUST00000169078,ENSMUST00000170600_5end | |||
|cluster_id=chr14:32898990..32899051,+ | |||
|description=CAGE_peak_1_at_Oxnad1_5end | |||
|id=chr14:32898990..32899051,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.62e-16!47;UBERON:0007100!4.35e-11!18;UBERON:0000948!4.35e-11!18;UBERON:0005498!4.35e-11!18;UBERON:0004140!4.35e-11!18;UBERON:0009881!4.35e-11!18;UBERON:0004141!4.35e-11!18;UBERON:0003084!4.35e-11!18;UBERON:0007005!4.35e-11!18;UBERON:0004139!4.35e-11!18;UBERON:0004291!4.35e-11!18;UBERON:0003103!8.09e-10!43;UBERON:0005172!8.31e-10!49;UBERON:0005173!8.31e-10!49;UBERON:0002417!8.31e-10!49;UBERON:0000916!8.31e-10!49;UBERON:0002107!1.17e-09!22;UBERON:0007499!1.17e-09!22;UBERON:0006925!1.17e-09!22;UBERON:0009497!1.17e-09!22;UBERON:0000015!1.17e-09!22;UBERON:0002423!1.17e-09!22;UBERON:0006235!1.17e-09!22;UBERON:0008835!1.17e-09!22;UBERON:0003894!1.17e-09!22;UBERON:0004161!1.17e-09!22;UBERON:0008836!1.17e-09!22;UBERON:0004535!3.25e-09!23;UBERON:0001009!3.25e-09!23;UBERON:0002365!5.57e-09!25;UBERON:0002330!5.57e-09!25;UBERON:0009854!7.00e-09!23;UBERON:0009856!7.00e-09!23;UBERON:0005256!1.48e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.62e-16,47;UBERON:0007100,4.35e-11,18;UBERON:0000948,4.35e-11,18;UBERON:0005498,4.35e-11,18;UBERON:0004140,4.35e-11,18;UBERON:0009881,4.35e-11,18;UBERON:0004141,4.35e-11,18;UBERON:0003084,4.35e-11,18;UBERON:0007005,4.35e-11,18;UBERON:0004139,4.35e-11,18;UBERON:0004291,4.35e-11,18;UBERON:0003103,8.09e-10,43;UBERON:0005172,8.31e-10,49;UBERON:0005173,8.31e-10,49;UBERON:0002417,8.31e-10,49;UBERON:0000916,8.31e-10,49;UBERON:0002107,1.17e-09,22;UBERON:0007499,1.17e-09,22;UBERON:0006925,1.17e-09,22;UBERON:0009497,1.17e-09,22;UBERON:0000015,1.17e-09,22;UBERON:0002423,1.17e-09,22;UBERON:0006235,1.17e-09,22;UBERON:0008835,1.17e-09,22;UBERON:0003894,1.17e-09,22;UBERON:0004161,1.17e-09,22;UBERON:0008836,1.17e-09,22;UBERON:0004535,3.25e-09,23;UBERON:0001009,3.25e-09,23;UBERON:0003104,4.00e-09,61;UBERON:0009142,4.00e-09,61;UBERON:0002365,5.57e-09,25;UBERON:0002330,5.57e-09,25;UBERON:0009854,7.00e-09,23;UBERON:0009856,7.00e-09,23;UBERON:0005256,1.31e-07,45 | |||
|phase1_expression=9.12848428497326,9.07336059862339,10.9199817453489,6.65421264875026,7.51343594919521,9.9048770428015,11.9142446703718,11.879345756625,3.09735188733667,4.21316147379588,3.4243593645101,4.46724090373884,4.96482116800497,4.80812213304486,8.99396356902289,7.49158489342356,6.99561878128147,3.47008381894061,2.87940310572051,4.2438965179803,6.88850650223665,14.1986060217266,15.6719873483361,24.1588558418044,16.0586496747019,10.3361753540704,14.6459078694085,13.7901588918969,7.03086651988583,14.8697776558359,11.5299865540758,34.2916563668201,23.9875267157982,15.8481681015439,21.9527231010969,24.9351968037739,24.2961533952219,10.4632907684227,7.813353445238,8.37637990358077,67.0583896355356,17.7591826089196,2.42755176515577,4.15459499319405,3.24406179902447,6.24058957349717,3.12956537739216,3.70642765846759,9.88587822305123,7.77719596297134,5.03951117851305,5.75010257459886,2.85230430298152,2.17608642603403,2.35265659399725,18.2654199585522,20.3438742356517,23.2052441524849,3.03474691289397,2.11596391708813,4.43681982454325,5.42151251310611,7.11435836888911,1.7997994345628,0.988866362566974,1.4209602298922,5.69240209984969,6.53171119046643,3.42175720617976,4.99521971827255,2.3135745748652,7.14127461009509,7.95126747425809,3.30725157880376,2.87536413054709,1.83843757322004,8.8092704799511,6.12899222808901,6.29786786350598,3.95658863190582,4.66586982372289,4.68822033501084,6.97957497503452,9.56696437053856,5.80633341551878,6.48182888042069,8.11518580554887,6.52398060388552,2.27178579999552,4.91215140694106,52.175607966302,25.8127163094416,31.9586526842643,25.3660500069774,30.5394916200404,27.7776670000348,18.2577746171277,3.06774580640504,4.41636207824877,3.88673531961374,9.15482228548423,1.28326477414318,0,0,12.3399893376392,11.6545538118545,14.6602089054287,12.3318590096585,4.14300613835475,9.79718117827843,14.5727674483554,16.1366703505435,11.761390360059,12.0578112442098,8.70156432804216,15.2056575508907,16.0676729027343,46.5609929282116,4.42305275974937,6.63244084784378,8.83366073841574,8.727754556434,5.59175283654366,8.78342391034641,8.58731497935166,9.96282515313506,7.42853771936706,8.99854096490112,11.0551097553566,7.04016005202667,2.74500361691176,2.51308704225729,4.17178368461463,4.85859368927628,5.194701113989,4.38051410282946,11.915205570487,7.0911973247753,7.07623723614289,93.8570677253674,6.8963834770233,6.20735681970377,6.84236093260327,6.78171680260718,5.51095643125756,5.50888997224854,4.02917415606834,43.4621662841546,7.54487975264948,4.72765200419548,6.33424046990216,7.23345917010997,5.00485048606076,5.57203466435466,2.05782136407943,12.1410902759281,10.5331978096985,7.97778512055617,8.24074148247219,15.3273071676271,19.465662978431,16.7457717158744,21.0702814670837,19.6764231747404,24.2199367233184,21.3931229170375,23.6080593231665,16.6974439585052,28.1397343352052,36.1168420974009,34.6974504856263,45.0295961270024,39.2994706370981,31.8069212462081,3.36463917702604,5.35103984372279,17.1817767151575,12.164726066523,7.67837701926842,8.82499353069666,16.2373001265838,15.5296313959974,12.2307924114679,19.403013863481,9.49058123089023,12.8465184684728,9.55073793441024,10.3457365461398,8.57841983324129,9.88701349519644,10.8069024937347,10.9527700289902,17.8287826895897,12.9100819248994,19.1603150644237,11.4044743593376,12.9948166402309,7.43439690837377,10.1178459398812,16.2371162777562,18.0548537017581,21.7179008502369,14.8226313543574,16.6845105716094,15.1350426237166,15.0657615297852,10.7515864335907,10.1294407096015,10.4396599230382,12.083237772934,10.2145192868272,15.6500005517206,15.814502718009,14.8856379067401,20.9065240986756,22.9846778931872,33.9061111556414,21.7099584613515,2.21703828199926,7.20067364727842,9.4519686336375,7.97801903143384,7.27539769694356,5.19269398069629,3.80869825417622,4.29294025287157,3.94087860265477,3.98636441367795,2.55127629851979,3.93271955317771,2.76295970985433,2.89298117163023,0,1.63171705145613,9.83528546038072,11.0374698521893,4.97706828962155,7.85318300167761,4.42624352517024,14.1383719234449,8.20321370482267,12.8844785617891,7.75524231838076,6.21318874676635,7.35235624471901,5.09537755419898,6.47697122679831,11.9824901743638,8.69633111482352,5.46246237917072,8.65834519770439,18.3407571777273,16.4515828947112,7.25868541079156,0,8.74010290157933,8.46505959501303,10.7504895460862,8.26845300066164,7.68587869859819,7.49442050187841,12.3601468022352,9.62542921638748,6.32073515871632,4.21674434299995,4.12542172992747,9.19186935535228,6.30213829109586,8.5376731296618,8.14480733120051,6.7389288784064,6.77801506887868,8.39200005070817,11.5696680663548,7.50949465803873,4.87213762986786,10.1443063105282,2.30840754118072,5.65125493435669,5.48847616846218,5.72987251215055,3.61109979439135,13.1166376483433,6.86073617438886,4.78438466233988,7.42992724667601,10.3708935327039,5.65105371014073,7.65487675237741,6.17701067657611,9.34881364966204,8.25713568709582,8.153798454461,19.0934123603023,7.43389584915668,8.13277868507395,11.5565714679327,9.40897332065109,12.4466661335321,8.63131816862852,8.43065248398426,7.32916637555283,13.2207272757629,6.21339313086926,3.38215763210514,8.97099276263873,10.7548018797113,9.13920585217024,8.91202781996345,7.43406952159424,8.09764946655702,6.51021924219751,7.7595914875026,2.89900944991207,6.91272015018877,2.8441000856536,12.3662381327,12.5307367741089,10.2637450152458,7.87717460936918,8.14593554603186,6.61074972359829,9.30444021199837,6.25991989678515,4.72482201260999,4.63800451629466,4.19068887180935,4.81059208201647,3.97381467417334,12.923631866067,7.76950836809226,11.5730875026224,10.4088462145729,7.72758376128762,6.75656911624255,3.6630324853453,3.21552568618599,6.01886524842436,5.0827665835536,4.14292712856459,4.58316410751517,6.01486138202907,2.05524755931193,3.7769694869485,4.72515750162264,4.5032120322422,8.60970577069989,2.5888015587591,6.2272408550506,5.98537310101547,7.17081144167364,10.4535888339366,8.17491334249131,9.19217542250071,12.4458167568905,10.7138229764225,9.62757628775446,10.8659801058433,8.87177549615839,9.99719609346204,12.0797544636148,9.41169740351578,12.6358031702349,9.52587382566147,12.051969898265,10.0312794641127,9.89006161927936,9.71512872887022,10.9718160763333,11.0034999818789,10.4911923576821,11.046327664057,12.4224382148236,12.4383473600764,12.8049581010941,14.4688341290814,8.96307151382688,10.1005608898393,10.4398815949273,12.0175468498187,9.82154503607254,9.29621047115796,10.2240503820005,5.49583271463481,11.462648813825,7.73535794573874,7.07766828654721,8.16188250742207,19.0131625208746 | |||
|short_description=p1@Oxnad1 | |||
}} |
Revision as of 06:19, 4 August 2015
Short description: | p1@Oxnad1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Oxnad1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000164868, ENSMUST00000168986, ENSMUST00000169078, ENSMUST00000170600_5end |
EntrezGene: | 218885 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data