FFCP PHASE1:Mm9::chr11:86358570..86358582,+: Difference between revisions
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{{FFCP|EntrezGene=56427|HGNC=|UniProt=Q8CDD3,Q9R1K7,Q5SWF8|association_with_transcript=77bp_to_ENSMUST00000020821,ENSMUST00000069503,ENSMUST00000108030,NM_001199045,NM_001199046,NM_001199047,NM_019756,uc007ksr.1,uc007kss.1,uc007kst.2,uc007ksu.2_5end|description=CAGE_peak_7_at_Tubd1_5end|id=chr11:86358570..86358582,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,3.42e-19,3;CL:0000359,3.42e-19,3;CL:0002539,3.42e-19,3;CL:0000514,3.42e-19,3;CL:0000107,1.44e-16,9;CL:0000222,1.93e-14,7;CL:0000680,7.02e-10,6;CL:0000187,7.02e-10,6;CL:0000056,7.02e-10,6;CL:0000393,3.96e-09,39;CL:0000211,3.96e-09,39;CL:0000213,1.59e-07,1;CL:0002078,1.59e-07,1;CL:0000115,1.59e-07,1;CL:0002262,1.59e-07,1;CL:1000398,1.59e-07,1;CL:0000625,8.26e-07,1;CL:0000355,9.63e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000055,4.18e-20,5;UBERON:0007500,4.18e-20,5;UBERON:0001981,4.18e-20,5;UBERON:0002049,4.18e-20,5;UBERON:0007798,4.18e-20,5;UBERON:0004537,4.18e-20,5;UBERON:0006965,4.18e-20,5;UBERON:0001135,3.42e-19,3;UBERON:0004237,3.42e-19,3;UBERON:0004695,3.42e-19,3;UBERON:0002111,3.42e-19,3;UBERON:0004178,3.42e-19,3;UBERON:0000013,7.84e-19,3;UBERON:0002410,1.44e-16,9;UBERON:0000947,1.51e-14,4;UBERON:0001637,1.51e-14,4;UBERON:0004573,1.51e-14,4;UBERON:0003509,1.51e-14,4;UBERON:0004571,1.51e-14,4;UBERON:0010191,1.51e-14,4;UBERON:0004572,1.51e-14,4;UBERON:0000010,1.50e-13,11;UBERON:0010313,1.02e-08,3;UBERON:0002342,1.02e-08,3;UBERON:0002005,1.02e-08,3;UBERON:0005428,1.02e-08,3;UBERON:0005062,1.02e-08,3;UBERON:0002394,1.59e-07,1;UBERON:0001281,1.59e-07,1;UBERON:0000353,1.59e-07,1;UBERON:0003497,1.59e-07,1;UBERON:0003909,1.59e-07,1;UBERON:0003928,1.59e-07,1;UBERON:0003835,1.59e-07,1;UBERON:0003513,1.59e-07,1;UBERON:0001280,1.59e-07,1;UBERON:0004647,1.59e-07,1;UBERON:0002294,1.59e-07,1;UBERON:0001173,1.59e-07,1;UBERON:0004912,1.59e-07,1;UBERON:0005171,1.59e-07,1;UBERON:0001134,9.63e-07,9;UBERON:0002036,9.63e-07,9;UBERON:0002385,9.63e-07,9;UBERON:0000486,9.63e-07,9;UBERON:0007503,9.63e-07,9;UBERON:0001015,9.63e-07,9;UBERON:0002329,9.63e-07,9;UBERON:0003082,9.63e-07,9;UBERON:0003059,9.63e-07,9;UBERON:0007282,9.63e-07,9;UBERON:0004290,9.63e-07,9;UBERON:0009618,9.63e-07,9|phase1_expression=0,0,0.454999239389536,0,0,0.839396359559449,0,0,0.281577444303333,0.234064526321993,0,0,0.171200729931206,0,0,0.202475267389826,0,0,0.548457734422955,0,0,0.198581902401771,0,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,2.01434908760924,3.24406179902447,2.0190142737785,0,0,0,0,0.139986421625363,0,0.503347818173209,0.725362142011344,1.00828139742739,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0.284743361598206,0,0,0.0755715601067855,2.6087803983151,0,0,0,0,0.448026887097336,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0,0,0.776813650941515,0.29688427812965,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0.502666365318702,0,0.722996784599558,0,0.161766849947409,0,0,0,0,0,0,0.359445373517761,0,0.127070227073065,0.149790639404823,0,0,0.347648640384553,0,0,0.162241263067758,0.203678727700633,0.497627882440372,0.505445516867349,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0,0.378212160335639,0,0.43839146485515,0,0.348252166522167,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0,0.268412837520744,0.210289948564127,0.102904612379284,0.330418782983798,0,0.853153002140936,0,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0.216138049874694,0.398282546508734,0.379335801906163,0.114248512609729,0,0,0.387904974335251,0.0701358198903186,0.126473074248515,0,0.31399745568275,0.370191491765402,0,0.166845105716094,0.393117990226406,0,0,0,0,0,0,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0.482443521363367,1.10851914099963,0,0.651859905768103,0.678980343100753,0.938760993154008,0.335012514883631,1.42826184531608,0.780534591431195,0.630540576424764,0,0.318909537314974,0.655453258862952,0.345369963731791,0.578596234326046,1.50791283939272,0,0,0,0.481651769963376,0.117211686592203,0.163934945376675,0,1.26203287766503,1.95219372148319,0.430846795465598,0,0,0,1.61924280669958,2.63030272120181,1.97643888973262,0,0.141940085208269,0,0,0.164970122972535,1.32745138339963,0,0,0.188605079755898,0.590603785761546,0.307435147943927,0.258428293168221,0,0,0,1.05418608574999,0,0,0.36012218806262,0,0.214337035031592,0.177340233642274,0.535106452806212,0.164549020602121,0,0,0,0,0.49465875882444,0.322928853391811,0.0603129249281559,0,0,0.291480836629851,0,0,0.412773735926445,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0,0,0.324016022465404,0.627264888043406,0.436725127492355,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.645799117388655,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0.410843828659309,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0.295379054349154,0.201932899896295,0.0762068066549998,0,0,0.192423683280659,0.233753804363138,0,0,0,0.335769232728157,0.386379188064381,0,0.36630324853453,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0.31136204275253,0,0.512200817262403,0.243106717068294,0.419226325255965,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.760437899670719,0,0.187283014939765,0.0640251524048693,0.114870937911227,0.476293691283074,0.115884325944855,0.192909220463705,0,0.294397840268795,0.342869252385415,0.887379030796687,0.476872379894642,0.145346416632329,0.188218760830661,0.25384382367503,0.548783918618318,0,0.407412341537585,0,0.118635018124174,0.492522411877817,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0.429742108096597,0,0,0.695603506861264|short_description=p7@Tubd1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:56427 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8CDD3,uniprot:Q9R1K7,uniprot:Q5SWF8 | |||
|association_with_transcript=77bp_to_ENSMUST00000020821,ENSMUST00000069503,ENSMUST00000108030,NM_001199045,NM_001199046,NM_001199047,NM_019756,uc007ksr.1,uc007kss.1,uc007kst.2,uc007ksu.2_5end | |||
|cluster_id=chr11:86358570..86358582,+ | |||
|description=CAGE_peak_7_at_Tubd1_5end | |||
|id=chr11:86358570..86358582,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.42e-19,3;CL:0000359,3.42e-19,3;CL:0002539,3.42e-19,3;CL:0000514,3.42e-19,3;CL:0000107,1.44e-16,9;CL:0000222,1.93e-14,7;CL:0000680,7.02e-10,6;CL:0000187,7.02e-10,6;CL:0000056,7.02e-10,6;CL:0000393,3.96e-09,39;CL:0000211,3.96e-09,39;CL:0000213,1.59e-07,1;CL:0002078,1.59e-07,1;CL:0000115,1.59e-07,1;CL:0002262,1.59e-07,1;CL:1000398,1.59e-07,1;CL:0000625,8.26e-07,1;CL:0000355,9.63e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,4.18e-20,5;UBERON:0007500,4.18e-20,5;UBERON:0001981,4.18e-20,5;UBERON:0002049,4.18e-20,5;UBERON:0007798,4.18e-20,5;UBERON:0004537,4.18e-20,5;UBERON:0006965,4.18e-20,5;UBERON:0001135,3.42e-19,3;UBERON:0004237,3.42e-19,3;UBERON:0004695,3.42e-19,3;UBERON:0002111,3.42e-19,3;UBERON:0004178,3.42e-19,3;UBERON:0000013,7.84e-19,3;UBERON:0002410,1.44e-16,9;UBERON:0000947,1.51e-14,4;UBERON:0001637,1.51e-14,4;UBERON:0004573,1.51e-14,4;UBERON:0003509,1.51e-14,4;UBERON:0004571,1.51e-14,4;UBERON:0010191,1.51e-14,4;UBERON:0004572,1.51e-14,4;UBERON:0000010,1.50e-13,11;UBERON:0010313,1.02e-08,3;UBERON:0002342,1.02e-08,3;UBERON:0002005,1.02e-08,3;UBERON:0005428,1.02e-08,3;UBERON:0005062,1.02e-08,3;UBERON:0002394,1.59e-07,1;UBERON:0001281,1.59e-07,1;UBERON:0000353,1.59e-07,1;UBERON:0003497,1.59e-07,1;UBERON:0003909,1.59e-07,1;UBERON:0003928,1.59e-07,1;UBERON:0003835,1.59e-07,1;UBERON:0003513,1.59e-07,1;UBERON:0001280,1.59e-07,1;UBERON:0004647,1.59e-07,1;UBERON:0002294,1.59e-07,1;UBERON:0001173,1.59e-07,1;UBERON:0004912,1.59e-07,1;UBERON:0005171,1.59e-07,1;UBERON:0001134,9.63e-07,9;UBERON:0002036,9.63e-07,9;UBERON:0002385,9.63e-07,9;UBERON:0000486,9.63e-07,9;UBERON:0007503,9.63e-07,9;UBERON:0001015,9.63e-07,9;UBERON:0002329,9.63e-07,9;UBERON:0003082,9.63e-07,9;UBERON:0003059,9.63e-07,9;UBERON:0007282,9.63e-07,9;UBERON:0004290,9.63e-07,9;UBERON:0009618,9.63e-07,9 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0.839396359559449,0,0,0.281577444303333,0.234064526321993,0,0,0.171200729931206,0,0,0.202475267389826,0,0,0.548457734422955,0,0,0.198581902401771,0,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,2.01434908760924,3.24406179902447,2.0190142737785,0,0,0,0,0.139986421625363,0,0.503347818173209,0.725362142011344,1.00828139742739,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0.284743361598206,0,0,0.0755715601067855,2.6087803983151,0,0,0,0,0.448026887097336,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0,0,0.776813650941515,0.29688427812965,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0.502666365318702,0,0.722996784599558,0,0.161766849947409,0,0,0,0,0,0,0.359445373517761,0,0.127070227073065,0.149790639404823,0,0,0.347648640384553,0,0,0.162241263067758,0.203678727700633,0.497627882440372,0.505445516867349,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0,0.378212160335639,0,0.43839146485515,0,0.348252166522167,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0,0.268412837520744,0.210289948564127,0.102904612379284,0.330418782983798,0,0.853153002140936,0,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0.216138049874694,0.398282546508734,0.379335801906163,0.114248512609729,0,0,0.387904974335251,0.0701358198903186,0.126473074248515,0,0.31399745568275,0.370191491765402,0,0.166845105716094,0.393117990226406,0,0,0,0,0,0,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0.482443521363367,1.10851914099963,0,0.651859905768103,0.678980343100753,0.938760993154008,0.335012514883631,1.42826184531608,0.780534591431195,0.630540576424764,0,0.318909537314974,0.655453258862952,0.345369963731791,0.578596234326046,1.50791283939272,0,0,0,0.481651769963376,0.117211686592203,0.163934945376675,0,1.26203287766503,1.95219372148319,0.430846795465598,0,0,0,1.61924280669958,2.63030272120181,1.97643888973262,0,0.141940085208269,0,0,0.164970122972535,1.32745138339963,0,0,0.188605079755898,0.590603785761546,0.307435147943927,0.258428293168221,0,0,0,1.05418608574999,0,0,0.36012218806262,0,0.214337035031592,0.177340233642274,0.535106452806212,0.164549020602121,0,0,0,0,0.49465875882444,0.322928853391811,0.0603129249281559,0,0,0.291480836629851,0,0,0.412773735926445,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0,0,0.324016022465404,0.627264888043406,0.436725127492355,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.645799117388655,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0.410843828659309,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0.295379054349154,0.201932899896295,0.0762068066549998,0,0,0.192423683280659,0.233753804363138,0,0,0,0.335769232728157,0.386379188064381,0,0.36630324853453,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0.31136204275253,0,0.512200817262403,0.243106717068294,0.419226325255965,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.760437899670719,0,0.187283014939765,0.0640251524048693,0.114870937911227,0.476293691283074,0.115884325944855,0.192909220463705,0,0.294397840268795,0.342869252385415,0.887379030796687,0.476872379894642,0.145346416632329,0.188218760830661,0.25384382367503,0.548783918618318,0,0.407412341537585,0,0.118635018124174,0.492522411877817,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0.429742108096597,0,0,0.695603506861264 | |||
|short_description=p7@Tubd1 | |||
}} |
Revision as of 06:07, 4 August 2015
Short description: | p7@Tubd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Tubd1_5end |
Coexpression cluster: | NA |
Association with transcript: | 77bp_to_ENSMUST00000020821, ENSMUST00000069503, ENSMUST00000108030, NM_001199045, NM_001199046, NM_001199047, NM_019756, uc007ksr.1, uc007kss.1, uc007kst.2, uc007ksu.2_5end |
EntrezGene: | 56427 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.42e-19 | 3 |
vascular associated smooth muscle cell | 3.42e-19 | 3 |
aortic smooth muscle cell | 3.42e-19 | 3 |
smooth muscle myoblast | 3.42e-19 | 3 |
autonomic neuron | 1.44e-16 | 9 |
mesodermal cell | 1.93e-14 | 7 |
muscle precursor cell | 7.02e-10 | 6 |
muscle cell | 7.02e-10 | 6 |
myoblast | 7.02e-10 | 6 |
electrically responsive cell | 3.96e-09 | 39 |
electrically active cell | 3.96e-09 | 39 |
lining cell | 1.59e-07 | 1 |
meso-epithelial cell | 1.59e-07 | 1 |
endothelial cell | 1.59e-07 | 1 |
endothelial cell of sinusoid | 1.59e-07 | 1 |
endothelial cell of hepatic sinusoid | 1.59e-07 | 1 |
CD8-positive, alpha-beta T cell | 8.26e-07 | 1 |
multi-potent skeletal muscle stem cell | 9.63e-07 | 9 |