FFCP PHASE1:Mm9::chr7:133838869..133838945,+: Difference between revisions
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{{FFCP|EntrezGene=66162|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000144571_5end|description=CAGE_peak_2_at_Bola2_5end|id=chr7:133838869..133838945,+|ontology_enrichment_celltype=CL:0000219!8.08e-17!54;CL:0000063!6.99e-16!66;CL:0002320!1.31e-15!46;CL:0000134!1.31e-15!46;CL:0000988!4.13e-11!32;CL:0002032!4.13e-11!32;CL:0000037!4.13e-11!32;CL:0000566!4.13e-11!32;CL:0000837!4.13e-11!32;CL:0002031!2.16e-09!25;CL:0000144!3.40e-09!121;CL:0000012!3.40e-09!121;CL:0002371!6.16e-09!118;CL:0000723!1.43e-08!91;CL:0000048!1.43e-08!91;CL:0000049!3.84e-08!19;CL:0000548!8.64e-08!115;CL:0000004!8.64e-08!115;CL:0000255!8.64e-08!115;CL:0000763!2.49e-07!16;CL:0000034!2.58e-07!97|ontology_enrichment_celltype_v019_2=CL:0000219,7.23e-17,54;CL:0002320,1.17e-15,46;CL:0000134,1.17e-15,46;CL:0000988,3.71e-11,32;CL:0002032,3.71e-11,32;CL:0000037,3.71e-11,32;CL:0000837,3.71e-11,32;CL:0002031,1.94e-09,25;CL:0000723,1.40e-08,91;CL:0000048,1.40e-08,91;CL:0000049,3.43e-08,19;CL:0000763,2.22e-07,16;CL:0000034,2.70e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.31e-15!46;UBERON:0002405!1.99e-10!70;UBERON:0002371!8.69e-10!16;UBERON:0002193!4.55e-09!48;UBERON:0002204!1.37e-08!32;UBERON:0001007!1.41e-08!128;UBERON:0001555!1.41e-08!128;UBERON:0007026!1.41e-08!128;UBERON:0002390!3.54e-08!45;UBERON:0003061!3.54e-08!45;UBERON:0004921!6.70e-08!126;UBERON:0004185!6.70e-08!126;UBERON:0004119!9.42e-08!130;UBERON:0000925!9.42e-08!130;UBERON:0006595!9.42e-08!130;UBERON:0001474!1.05e-07!22;UBERON:0004765!1.05e-07!22;UBERON:0001434!1.05e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.17e-15,46;UBERON:0002371,8.66e-10,16;UBERON:0002193,3.88e-09,48;UBERON:0002405,3.88e-09,48;UBERON:0001007,8.59e-09,116;UBERON:0001555,8.59e-09,116;UBERON:0007026,8.59e-09,116;UBERON:0002204,1.36e-08,32;UBERON:0002390,3.04e-08,45;UBERON:0003061,3.04e-08,45;UBERON:0004921,4.24e-08,114;UBERON:0004119,6.38e-08,118;UBERON:0000925,6.38e-08,118;UBERON:0006595,6.38e-08,118;UBERON:0001474,1.05e-07,22;UBERON:0004765,1.05e-07,22;UBERON:0001434,1.05e-07,22|phase1_expression=3.52327463630547,1.74487703819681,4.09499315450582,3.93203474698879,4.50806156951712,4.19698179779725,5.13947809310157,7.23090611272827,6.335492496825,8.19225842126977,2.56826952338257,2.15384829287408,8.21763503669787,9.26656265641372,5.3297561890506,4.85940641735582,5.59649502502517,11.987562283613,11.2433835556706,13.1560792057389,3.40173160604279,6.15603897445489,6.00759515019551,6.87967418011649,7.34109699414944,2.29692785646008,7.75371593086335,3.66301095566011,9.5011709728187,7.05684363327806,4.8780712344167,10.1604907753541,6.76571266343027,0,7.79899373328441,7.14808975041517,6.53341940039581,7.95210098400125,8.5946887897618,9.42342739152837,4.70585190424811,4.09827290975067,2.91306211818692,3.52511090331616,2.93993100536592,1.65192076945513,14.8654355426127,5.66865406589161,7.24964403023757,5.05517737593137,6.43937539476668,4.31257693094915,12.751478060388,5.07753499407941,12.7715643674136,6.17422646486273,3.43840127926508,4.12537673821954,0.404632921719196,1.05798195854407,1.26766280701236,4.40497891689872,7.11435836888911,20.6976934974722,15.8218618010716,21.314403448383,6.5912024314049,6.91592949578798,2.17748185847803,1.21505344498522,2.3135745748652,2.85650984403804,5.07997644188711,0.979926393719632,1.34183659425531,1.83843757322004,2.20231761998777,4.21368215681119,2.4577045320999,1.18697658957174,0.457438218012048,1.56274011167028,4.74611098302348,2.8138130501584,2.44477196442896,0.883885756421003,1.56608848879013,1.4911955666024,2.27178579999552,1.88928900266964,7.8263411949453,9.46466264679525,2.719885334831,5.93673510801599,4.54843492213368,8.06448396775204,4.77511028447956,2.21559419351475,5.45550609666024,4.94675404314476,2.67602497575693,5.13305909657271,0,0,6.27824018932521,4.05375784760158,4.54972000513305,3.31133251185274,3.88406825470758,3.41416919849097,1.56136794089522,4.26251669636998,2.07553947530453,1.95939432718409,2.4693628498498,4.64966387919799,1.48316980640624,5.20557684911682,1.76922110389975,1.7794353494215,5.52103796150984,4.363877278217,16.775258509631,4.09893115816166,2.51336048176146,3.57639877292028,4.07371423320129,8.39863823390771,5.08280908292259,3.14560342750128,1.37250180845588,1.25654352112864,1.56441888173049,1.02286182932132,1.87009240103604,2.27137768294861,1.83310854930569,5.84712761867437,2.0217820674694,8.62811609134543,1.95180664444056,1.37941262660084,1.26043490863744,1.05493372485001,0.408218994907967,2.17793324484245,1.59292931751539,3.10444044886819,1.94011193639558,1.51284864134255,1.93546236580344,1.53437012699302,3.33656699070717,2.78601733217733,1.64625709126355,0.59710280045548,6.31991868581911,10.0365683774739,7.672414483681,0.207125772535502,1.87620847984877,1.98068267607116,0.710234206755631,1.18058539048442,2.77680803197281,3.0229412817553,2.41446061259657,2.10177616260905,0.658239399653922,2.79084688934462,2.99954595319666,3.50879969820798,4.6105524211120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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66162 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000144571_5end | |||
|cluster_id=chr7:133838869..133838945,+ | |||
|description=CAGE_peak_2_at_Bola2_5end | |||
|id=chr7:133838869..133838945,+ | |||
|ontology_enrichment_celltype=CL:0000219!8.08e-17!54;CL:0000063!6.99e-16!66;CL:0002320!1.31e-15!46;CL:0000134!1.31e-15!46;CL:0000988!4.13e-11!32;CL:0002032!4.13e-11!32;CL:0000037!4.13e-11!32;CL:0000566!4.13e-11!32;CL:0000837!4.13e-11!32;CL:0002031!2.16e-09!25;CL:0000144!3.40e-09!121;CL:0000012!3.40e-09!121;CL:0002371!6.16e-09!118;CL:0000723!1.43e-08!91;CL:0000048!1.43e-08!91;CL:0000049!3.84e-08!19;CL:0000548!8.64e-08!115;CL:0000004!8.64e-08!115;CL:0000255!8.64e-08!115;CL:0000763!2.49e-07!16;CL:0000034!2.58e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,7.23e-17,54;CL:0002320,1.17e-15,46;CL:0000134,1.17e-15,46;CL:0000988,3.71e-11,32;CL:0002032,3.71e-11,32;CL:0000037,3.71e-11,32;CL:0000837,3.71e-11,32;CL:0002031,1.94e-09,25;CL:0000723,1.40e-08,91;CL:0000048,1.40e-08,91;CL:0000049,3.43e-08,19;CL:0000763,2.22e-07,16;CL:0000034,2.70e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.31e-15!46;UBERON:0002405!1.99e-10!70;UBERON:0002371!8.69e-10!16;UBERON:0002193!4.55e-09!48;UBERON:0002204!1.37e-08!32;UBERON:0001007!1.41e-08!128;UBERON:0001555!1.41e-08!128;UBERON:0007026!1.41e-08!128;UBERON:0002390!3.54e-08!45;UBERON:0003061!3.54e-08!45;UBERON:0004921!6.70e-08!126;UBERON:0004185!6.70e-08!126;UBERON:0004119!9.42e-08!130;UBERON:0000925!9.42e-08!130;UBERON:0006595!9.42e-08!130;UBERON:0001474!1.05e-07!22;UBERON:0004765!1.05e-07!22;UBERON:0001434!1.05e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.17e-15,46;UBERON:0002371,8.66e-10,16;UBERON:0002193,3.88e-09,48;UBERON:0002405,3.88e-09,48;UBERON:0001007,8.59e-09,116;UBERON:0001555,8.59e-09,116;UBERON:0007026,8.59e-09,116;UBERON:0002204,1.36e-08,32;UBERON:0002390,3.04e-08,45;UBERON:0003061,3.04e-08,45;UBERON:0004921,4.24e-08,114;UBERON:0004119,6.38e-08,118;UBERON:0000925,6.38e-08,118;UBERON:0006595,6.38e-08,118;UBERON:0001474,1.05e-07,22;UBERON:0004765,1.05e-07,22;UBERON:0001434,1.05e-07,22 | |||
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| |||
|short_description=p2@Bola2 | |||
}} |
Revision as of 05:37, 4 August 2015
Short description: | p2@Bola2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Bola2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000144571_5end |
EntrezGene: | 66162 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 7.23e-17 | 54 |
connective tissue cell | 1.17e-15 | 46 |
mesenchymal cell | 1.17e-15 | 46 |
hematopoietic cell | 3.71e-11 | 32 |
hematopoietic oligopotent progenitor cell | 3.71e-11 | 32 |
hematopoietic stem cell | 3.71e-11 | 32 |
hematopoietic multipotent progenitor cell | 3.71e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 1.94e-09 | 25 |
somatic stem cell | 1.40e-08 | 91 |
multi fate stem cell | 1.40e-08 | 91 |
common myeloid progenitor | 3.43e-08 | 19 |
myeloid cell | 2.22e-07 | 16 |
stem cell | 2.70e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.17e-15 | 46 |
bone marrow | 8.66e-10 | 16 |
hemolymphoid system | 3.88e-09 | 48 |
immune system | 3.88e-09 | 48 |
digestive system | 8.59e-09 | 116 |
digestive tract | 8.59e-09 | 116 |
primitive gut | 8.59e-09 | 116 |
musculoskeletal system | 1.36e-08 | 32 |
hematopoietic system | 3.04e-08 | 45 |
blood island | 3.04e-08 | 45 |
subdivision of digestive tract | 4.24e-08 | 114 |
endoderm-derived structure | 6.38e-08 | 118 |
endoderm | 6.38e-08 | 118 |
presumptive endoderm | 6.38e-08 | 118 |
bone element | 1.05e-07 | 22 |
skeletal element | 1.05e-07 | 22 |
skeletal system | 1.05e-07 | 22 |