FFCP PHASE1:Mm9::chr5:23957791..23957808,+: Difference between revisions
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{{FFCP|EntrezGene=213990|HGNC=|MCL_coexpression_id=13|UniProt=F8VQE9,Q8BV81,Q8VHH5|association_with_transcript=-186bp_to_ENSMUST00000024123,NM_139153,uc008wru.1,uc008wrv.1_5end|description=CAGE_peak_2_at_Agap3_5end|id=chr5:23957791..23957808,+|ontology_enrichment_celltype=CL:0000117!1.11e-13!23;CL:0000337!1.11e-13!23;CL:0000540!2.22e-12!33;CL:0000047!2.22e-12!33;CL:0000031!2.22e-12!33;CL:0000404!2.22e-12!33;CL:0000393!2.26e-11!39;CL:0000211!2.26e-11!39;CL:0002319!1.04e-10!43;CL:0000221!2.00e-10!44;CL:0000133!2.00e-10!44;CL:0000055!1.27e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.11e-13,23;CL:0000337,1.11e-13,23;CL:0000540,2.21e-12,33;CL:0000047,2.21e-12,33;CL:0000031,2.21e-12,33;CL:0000404,2.21e-12,33;CL:0000393,2.26e-11,39;CL:0000211,2.26e-11,39;CL:0002319,1.04e-10,43;CL:0000221,2.00e-10,44;CL:0000133,2.00e-10,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.82e-25!73;UBERON:0005743!3.82e-25!73;UBERON:0000073!6.11e-25!75;UBERON:0001016!6.11e-25!75;UBERON:0001049!1.30e-21!52;UBERON:0005068!1.30e-21!52;UBERON:0006241!1.30e-21!52;UBERON:0007135!1.30e-21!52;UBERON:0000955!8.49e-21!50;UBERON:0006238!8.49e-21!50;UBERON:0000033!9.64e-21!63;UBERON:0002616!3.16e-20!49;UBERON:0004121!1.17e-19!102;UBERON:0000924!1.17e-19!102;UBERON:0006601!1.17e-19!102;UBERON:0002346!1.40e-19!71;UBERON:0003075!1.40e-19!71;UBERON:0007284!1.40e-19!71;UBERON:0003056!2.11e-18!49;UBERON:0002020!7.95e-18!34;UBERON:0003080!1.29e-16!40;UBERON:0002780!3.72e-16!39;UBERON:0001890!3.72e-16!39;UBERON:0006240!3.72e-16!39;UBERON:0002791!3.74e-15!29;UBERON:0003528!3.74e-15!29;UBERON:0001893!3.74e-15!29;UBERON:0000153!1.20e-12!94;UBERON:0007811!2.48e-12!86;UBERON:0000956!8.39e-11!21;UBERON:0001869!8.39e-11!21;UBERON:0000203!8.39e-11!21;UBERON:0000025!1.98e-10!114;UBERON:0004111!3.29e-09!122;UBERON:0002619!1.27e-08!17;UBERON:0002021!5.80e-07!10;UBERON:0000411!5.80e-07!10;UBERON:0001950!5.80e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.81e-25,73;UBERON:0001016,6.09e-25,75;UBERON:0002346,2.65e-23,64;UBERON:0003075,2.65e-23,64;UBERON:0007284,2.65e-23,64;UBERON:0000073,4.49e-23,54;UBERON:0004121,2.20e-22,95;UBERON:0000924,2.20e-22,95;UBERON:0006601,2.20e-22,95;UBERON:0001049,1.30e-21,52;UBERON:0005068,1.30e-21,52;UBERON:0006241,1.30e-21,52;UBERON:0007135,1.30e-21,52;UBERON:0010314,3.49e-20,92;UBERON:0010371,5.44e-19,73;UBERON:0000955,9.38e-19,47;UBERON:0006238,9.38e-19,47;UBERON:0003056,2.11e-18,49;UBERON:0002616,3.39e-18,46;UBERON:0002020,7.92e-18,34;UBERON:0003080,1.29e-16,40;UBERON:0002780,3.71e-16,39;UBERON:0001890,3.71e-16,39;UBERON:0006240,3.71e-16,39;UBERON:0003528,3.73e-15,29;UBERON:0002791,3.73e-15,29;UBERON:0001893,3.73e-15,29;UBERON:0000956,8.38e-11,21;UBERON:0001869,8.38e-11,21;UBERON:0000203,8.38e-11,21;UBERON:0000025,1.91e-10,114;UBERON:0004111,3.18e-09,122;UBERON:0002619,1.27e-08,17;UBERON:0002021,5.79e-07,10;UBERON:0000411,5.79e-07,10;UBERON:0001950,5.79e-07,10|phase1_expression=4.32401887182944,2.44282785347553,2.27499619694768,2.41971369045464,1.00179145989269,2.18243053485457,2.33612640595526,4.64843964389675,9.57363310631334,8.66038747391376,1.36974374580404,4.30769658574817,3.25281386869291,3.84649770643589,1.99865857089398,1.61980213911861,1.39912375625629,1.26184866143295,1.37114433605739,1.69755860719212,5.69790044012167,3.07801948722744,0.783599367416806,0.799962113967033,1.60586496747019,1.14846392823004,1.29228598847722,2.15471232685889,1.33016393619462,0.504060259519861,1.33038306393183,5.71527606113668,7.99584223859941,0,3.46621943701529,1.66234645358492,2.6542016314108,0.837063261473815,0,1.57057123192139,0.588231488031014,0,2.42755176515577,5.03587271902309,4.76471576731718,5.50640256485045,3.12956537739216,6.1047043786525,4.39372365468944,4.27745777963423,2.65974201088189,2.87505128729943,0.838913030288682,10.8804321301702,3.02484419228218,3.34437266846731,3.43840127926508,7.21940929188419,18.613114399083,15.340738398889,14.5781222806421,4.74382344896785,3.55717918444456,16.1981949110652,21.7550599764734,15.6305625288142,13.4820049733282,14.9845139075406,14.101787273953,15.3906769698127,17.0363218694619,18.5673139862472,16.7860091123226,14.0864419097197,14.4726661237537,22.0612508786405,18.7196997698961,20.9407234459708,19.5080297235429,20.8380334613706,15.4614117688072,16.6692278578163,19.2636269310953,9.56696437053856,16.6550090076723,15.9099436155781,13.810053037513,12.1159639786445,4.39211921332468,5.51672388779534,4.92769630792852,2.58127163094416,2.03991400112325,6.47643829965381,2.59910566979068,4.92829575807069,5.75822122540183,5.45377032249785,3.63700406444016,4.94675404314476,4.08445917352373,5.13305909657271,7.64415719119937,0,5.41227602528035,6.58735650235256,2.52762222507392,3.08296475241462,1.29468941823586,4.75014845007439,3.99016251562112,0.913396434936424,3.68984795609694,2.86373017049983,4.46837087115678,2.89033160058254,4.20231445148436,3.32578520915797,3.5384422077995,4.36770494858005,4.85851340612866,3.39412677194655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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:213990 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F8VQE9,uniprot:Q8BV81,uniprot:Q8VHH5 | |||
|association_with_transcript=-186bp_to_ENSMUST00000024123,NM_139153,uc008wru.1,uc008wrv.1_5end | |||
|cluster_id=chr5:23957791..23957808,+ | |||
|description=CAGE_peak_2_at_Agap3_5end | |||
|id=chr5:23957791..23957808,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.11e-13!23;CL:0000337!1.11e-13!23;CL:0000540!2.22e-12!33;CL:0000047!2.22e-12!33;CL:0000031!2.22e-12!33;CL:0000404!2.22e-12!33;CL:0000393!2.26e-11!39;CL:0000211!2.26e-11!39;CL:0002319!1.04e-10!43;CL:0000221!2.00e-10!44;CL:0000133!2.00e-10!44;CL:0000055!1.27e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.11e-13,23;CL:0000337,1.11e-13,23;CL:0000540,2.21e-12,33;CL:0000047,2.21e-12,33;CL:0000031,2.21e-12,33;CL:0000404,2.21e-12,33;CL:0000393,2.26e-11,39;CL:0000211,2.26e-11,39;CL:0002319,1.04e-10,43;CL:0000221,2.00e-10,44;CL:0000133,2.00e-10,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.82e-25!73;UBERON:0005743!3.82e-25!73;UBERON:0000073!6.11e-25!75;UBERON:0001016!6.11e-25!75;UBERON:0001049!1.30e-21!52;UBERON:0005068!1.30e-21!52;UBERON:0006241!1.30e-21!52;UBERON:0007135!1.30e-21!52;UBERON:0000955!8.49e-21!50;UBERON:0006238!8.49e-21!50;UBERON:0000033!9.64e-21!63;UBERON:0002616!3.16e-20!49;UBERON:0004121!1.17e-19!102;UBERON:0000924!1.17e-19!102;UBERON:0006601!1.17e-19!102;UBERON:0002346!1.40e-19!71;UBERON:0003075!1.40e-19!71;UBERON:0007284!1.40e-19!71;UBERON:0003056!2.11e-18!49;UBERON:0002020!7.95e-18!34;UBERON:0003080!1.29e-16!40;UBERON:0002780!3.72e-16!39;UBERON:0001890!3.72e-16!39;UBERON:0006240!3.72e-16!39;UBERON:0002791!3.74e-15!29;UBERON:0003528!3.74e-15!29;UBERON:0001893!3.74e-15!29;UBERON:0000153!1.20e-12!94;UBERON:0007811!2.48e-12!86;UBERON:0000956!8.39e-11!21;UBERON:0001869!8.39e-11!21;UBERON:0000203!8.39e-11!21;UBERON:0000025!1.98e-10!114;UBERON:0004111!3.29e-09!122;UBERON:0002619!1.27e-08!17;UBERON:0002021!5.80e-07!10;UBERON:0000411!5.80e-07!10;UBERON:0001950!5.80e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.81e-25,73;UBERON:0001016,6.09e-25,75;UBERON:0002346,2.65e-23,64;UBERON:0003075,2.65e-23,64;UBERON:0007284,2.65e-23,64;UBERON:0000073,4.49e-23,54;UBERON:0004121,2.20e-22,95;UBERON:0000924,2.20e-22,95;UBERON:0006601,2.20e-22,95;UBERON:0001049,1.30e-21,52;UBERON:0005068,1.30e-21,52;UBERON:0006241,1.30e-21,52;UBERON:0007135,1.30e-21,52;UBERON:0010314,3.49e-20,92;UBERON:0010371,5.44e-19,73;UBERON:0000955,9.38e-19,47;UBERON:0006238,9.38e-19,47;UBERON:0003056,2.11e-18,49;UBERON:0002616,3.39e-18,46;UBERON:0002020,7.92e-18,34;UBERON:0003080,1.29e-16,40;UBERON:0002780,3.71e-16,39;UBERON:0001890,3.71e-16,39;UBERON:0006240,3.71e-16,39;UBERON:0003528,3.73e-15,29;UBERON:0002791,3.73e-15,29;UBERON:0001893,3.73e-15,29;UBERON:0000956,8.38e-11,21;UBERON:0001869,8.38e-11,21;UBERON:0000203,8.38e-11,21;UBERON:0000025,1.91e-10,114;UBERON:0004111,3.18e-09,122;UBERON:0002619,1.27e-08,17;UBERON:0002021,5.79e-07,10;UBERON:0000411,5.79e-07,10;UBERON:0001950,5.79e-07,10 | |||
|phase1_expression=4.32401887182944,2.44282785347553,2.27499619694768,2.41971369045464,1.00179145989269,2.18243053485457,2.33612640595526,4.64843964389675,9.57363310631334,8.66038747391376,1.36974374580404,4.30769658574817,3.25281386869291,3.84649770643589,1.99865857089398,1.61980213911861,1.39912375625629,1.26184866143295,1.37114433605739,1.69755860719212,5.69790044012167,3.07801948722744,0.783599367416806,0.799962113967033,1.60586496747019,1.14846392823004,1.29228598847722,2.15471232685889,1.33016393619462,0.504060259519861,1.33038306393183,5.71527606113668,7.99584223859941,0,3.46621943701529,1.66234645358492,2.6542016314108,0.837063261473815,0,1.57057123192139,0.588231488031014,0,2.42755176515577,5.03587271902309,4.76471576731718,5.50640256485045,3.12956537739216,6.1047043786525,4.39372365468944,4.27745777963423,2.65974201088189,2.87505128729943,0.838913030288682,10.8804321301702,3.02484419228218,3.34437266846731,3.43840127926508,7.21940929188419,18.613114399083,15.340738398889,14.5781222806421,4.74382344896785,3.55717918444456,16.1981949110652,21.7550599764734,15.6305625288142,13.4820049733282,14.9845139075406,14.101787273953,15.3906769698127,17.0363218694619,18.5673139862472,16.7860091123226,14.0864419097197,14.4726661237537,22.0612508786405,18.7196997698961,20.9407234459708,19.5080297235429,20.8380334613706,15.4614117688072,16.6692278578163,19.2636269310953,9.56696437053856,16.6550090076723,15.9099436155781,13.810053037513,12.1159639786445,4.39211921332468,5.51672388779534,4.92769630792852,2.58127163094416,2.03991400112325,6.47643829965381,2.59910566979068,4.92829575807069,5.75822122540183,5.45377032249785,3.63700406444016,4.94675404314476,4.08445917352373,5.13305909657271,7.64415719119937,0,5.41227602528035,6.58735650235256,2.52762222507392,3.08296475241462,1.29468941823586,4.75014845007439,3.99016251562112,0.913396434936424,3.68984795609694,2.86373017049983,4.46837087115678,2.89033160058254,4.20231445148436,3.32578520915797,3.5384422077995,4.36770494858005,4.85851340612866,3.39412677194655,0,19.6163133997737,18.431310199584,3.57639877292028,1.91704199209472,1.19980546198682,1.39777249780371,13.0317856282196,13.7250180845588,17.7172636479139,21.9018643442268,21.7358138730781,15.7918913865266,16.8730913590468,4.68461073711455,3.35898820647251,2.52722758433675,6.52369753248069,5.72529949035896,9.19608417733892,6.84236093260327,6.32960234910003,8.98081788797528,6.40568601424249,11.7127155699661,4.13925393182425,7.11374376678379,4.72765200419548,7.2139960907219,5.2606975782618,5.28289773528636,6.61679116392116,4.7329891373827,3.58261680273288,2.1066395619397,1.28673953557358,1.70498099637356,6.21377317606506,3.75241695969754,4.50155153652537,6.15536312521547,4.72234156193769,6.17068451549513,5.34828072925938,5.90201483079162,7.12268588439734,5.43047504714485,3.94001913789829,8.431156192769,8.33339928324394,6.58650345873152,8.45500438190342,23.3421842906181,15.2298826321341,1.65209391491899,0.793351699990633,3.19932375802851,5.10920678092965,4.76809606891745,3.83198696784351,4.44756087689741,2.66315876557583,1.42358718463353,4.6115707322723,2.5133520880027,1.1937388322469,2.14460495831032,0.898819408654221,1.29682829924817,3.58454291857861,3.41402221715547,3.31320686568214,1.1270773567308,2.44381593414377,3.10323979468201,3.64706263429657,3.28829993046138,3.09981310757165,2.35498091762062,1.72756029490521,5.33614728756868,1.83529616287703,3.14494392181125,2.24862112384854,2.23146133527353,2.65294875727659,3.8193877767213,4.89083433666378,3.24270453550071,2.74561413188081,0,2.97712758134803,1.24815069245824,5.05157755894223,1.25578189465339,1.4473305640901,4.61882975416512,4.35830247072115,4.72598431681875,3.22515662972857,5.39787571063555,4.69017520837084,5.2369600994923,8.58588050574315,3.31033802623001,4.4292937929755,3.50800491046472,2.94953966488328,3.28101465545202,3.32692834737477,10.5553898757491,7.07077388964322,2.45882136509518,2.20749397043786,9.9541365792431,12.8932855251423,3.77050374366353,5.55436039849621,5.99465616890888,4.29482618726302,4.95473814785438,7.88597033243422,6.23836287430704,5.66153061577665,5.66734982344852,3.79932615284705,5.13874111330481,15.7447445046685,4.11626247103979,4.27357448801413,6.67836533349662,7.9185659026817,10.619611067197,4.37005145078967,6.65111825322452,6.22396763194464,5.61073596473468,7.07100840271033,5.94385074286909,3.27180356529755,8.91243445961803,10.7452497698177,12.6502330289999,4.12542172992747,6.80879211507576,5.76195500900193,6.85601024048599,5.35842587578981,5.32020700926821,4.63758925765383,5.10101963866575,5.48036908406279,4.69343416127421,5.2958017715955,2.42581237860458,3.95727007059552,5.9741837877485,3.07595917133595,3.46179797609096,2.62625439592098,2.91480836629851,17.0591277849669,1.70870880797853,4.74689796315412,1.85194527369712,1.31857919903284,1.36694227721025,0.457556346413045,2.03974115992626,3.07893195112048,4.14599921413271,0.954670618015114,6.64305586520384,5.08298667817122,3.67218158794124,2.71814784818809,2.18362563746178,3.37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| |||
|short_description=p2@Agap3 | |||
}} |
Revision as of 05:07, 4 August 2015
Short description: | p2@Agap3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Agap3_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -186bp_to_ENSMUST00000024123, NM_139153, uc008wru.1, uc008wrv.1_5end |
EntrezGene: | 213990 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.11e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.11e-13 | 23 |
neuron | 2.21e-12 | 33 |
neuronal stem cell | 2.21e-12 | 33 |
neuroblast | 2.21e-12 | 33 |
electrically signaling cell | 2.21e-12 | 33 |
electrically responsive cell | 2.26e-11 | 39 |
electrically active cell | 2.26e-11 | 39 |
neural cell | 1.04e-10 | 43 |
ectodermal cell | 2.00e-10 | 44 |
neurectodermal cell | 2.00e-10 | 44 |