FFCP PHASE1:Mm9::chr14:30535021..30535072,-: Difference between revisions
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{{FFCP|EntrezGene=12294|HGNC=|MCL_coexpression_id=1|UniProt=Q9Z1L5|association_with_transcript=0bp_to_ENSMUST00000022567,NM_009785,uc007sui.1_5end|description=CAGE_peak_1_at_Cacna2d3_5end|id=chr14:30535021..30535072,-|ontology_enrichment_celltype=CL:0000117!6.10e-13!23;CL:0000337!6.10e-13!23;CL:0000540!9.91e-07!33;CL:0000047!9.91e-07!33;CL:0000031!9.91e-07!33;CL:0000404!9.91e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.21e-16,23;CL:0000337,1.21e-16,23;CL:0000540,8.46e-10,33;CL:0000047,8.46e-10,33;CL:0000031,8.46e-10,33;CL:0000404,8.46e-10,33;CL:0000393,4.99e-07,39;CL:0000211,4.99e-07,39;CL:0000221,5.41e-07,44;CL:0000133,5.41e-07,44;CL:0002319,9.55e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.63e-22!52;UBERON:0005068!2.63e-22!52;UBERON:0006241!2.63e-22!52;UBERON:0007135!2.63e-22!52;UBERON:0000033!2.54e-21!63;UBERON:0002346!1.85e-20!71;UBERON:0003075!1.85e-20!71;UBERON:0007284!1.85e-20!71;UBERON:0000955!2.09e-20!50;UBERON:0006238!2.09e-20!50;UBERON:0002616!4.68e-20!49;UBERON:0002020!3.07e-19!34;UBERON:0003056!7.26e-19!49;UBERON:0001017!1.37e-18!73;UBERON:0005743!1.37e-18!73;UBERON:0004121!1.65e-18!102;UBERON:0000924!1.65e-18!102;UBERON:0006601!1.65e-18!102;UBERON:0000073!2.77e-18!75;UBERON:0001016!2.77e-18!75;UBERON:0003080!6.72e-18!40;UBERON:0002780!2.10e-17!39;UBERON:0001890!2.10e-17!39;UBERON:0006240!2.10e-17!39;UBERON:0002791!5.74e-16!29;UBERON:0003528!5.74e-16!29;UBERON:0001893!5.74e-16!29;UBERON:0000956!3.11e-11!21;UBERON:0001869!3.11e-11!21;UBERON:0000203!3.11e-11!21;UBERON:0002619!9.02e-10!17;UBERON:0000153!1.68e-09!94;UBERON:0007811!1.39e-08!86;UBERON:0002021!3.87e-08!10;UBERON:0000411!3.87e-08!10;UBERON:0001950!3.87e-08!10;UBERON:0000468!3.70e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.55e-27,54;UBERON:0001049,1.01e-25,52;UBERON:0005068,1.01e-25,52;UBERON:0006241,1.01e-25,52;UBERON:0007135,1.01e-25,52;UBERON:0002020,5.69e-24,34;UBERON:0002346,6.23e-24,64;UBERON:0003075,6.23e-24,64;UBERON:0007284,6.23e-24,64;UBERON:0001017,9.76e-24,73;UBERON:0001016,1.57e-22,75;UBERON:0010371,4.12e-21,73;UBERON:0000955,4.68e-21,47;UBERON:0006238,4.68e-21,47;UBERON:0002616,1.32e-20,46;UBERON:0004121,9.78e-20,95;UBERON:0000924,9.78e-20,95;UBERON:0006601,9.78e-20,95;UBERON:0003528,1.17e-19,29;UBERON:0002791,1.17e-19,29;UBERON:0001893,1.17e-19,29;UBERON:0003056,1.82e-19,49;UBERON:0003080,3.57e-19,40;UBERON:0002780,1.54e-18,39;UBERON:0001890,1.54e-18,39;UBERON:0006240,1.54e-18,39;UBERON:0000956,1.97e-13,21;UBERON:0001869,1.97e-13,21;UBERON:0000203,1.97e-13,21;UBERON:0010314,9.04e-13,92;UBERON:0002619,1.77e-11,17;UBERON:0002021,2.78e-10,10;UBERON:0000411,2.78e-10,10;UBERON:0001950,2.78e-10,10;UBERON:0002420,1.77e-07,8;UBERON:0007245,1.77e-07,8;UBERON:0010009,1.77e-07,8;UBERON:0010011,1.77e-07,8;UBERON:0000454,1.77e-07,8;UBERON:0003076,4.35e-07,12;UBERON:0003057,4.35e-07,12|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0.157731082679119,0,0,3.31668831589172,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.388859798148567,0,0,0,0,0,0,0,0,6.47412674750713,3.70293685490423,7.60597684207415,0,0,0,0,0,1.49800055259202,1.53687322128622,3.21437798156281,1.62007125998029,2.10324961351382,7.9982275633065,8.61387309711293,4.89963196859816,4.60058260887535,3.67687514644008,3.30347642998166,9.44886301830389,8.1411462625809,7.78129097608144,6.58711033937349,7.8137005583514,3.62937898701795,6.19038871034848,6.1119299110724,13.258286346315,11.9592211871246,8.38797506213853,0.302904773332736,0.377857800533928,0.289864488701678,0,0,0.539703191637817,0,0,0.983110940922263,0,0,0,1.69012103732017,0,0,0,0,0.506719730950197,0,0.22836775943812,0.517875767294343,0.742210695324124,0.693941307064543,0,1.38369298353635,0.452167921657868,0.705532242814229,0.502666365318702,0.247194967734374,0.289198713839823,0,0,0.220841518460394,0.484875253135222,0,3.51336956413857,8.58731497935166,0.510914110417183,0,0,0,3.59497534571574,25.6200337578431,30.1570445070875,15.1227158567281,25.3158302757027,7.06479351502504,18.0087802005211,1.52759045775474,1.24406970610093,1.51633655060205,0.420883711772948,0.130120442962704,0.459804208866946,1.44049703844279,3.91832526372859,2.65342346690179,2.0498195245576,2.81105173679186,2.06962696591213,0.215567992932842,0.189106080167819,1.93546236580344,0.876782929710299,3.61461423993277,2.089512999133,1.4404749548556,0.59710280045548,0,0,0,0.621377317606506,0.469052119962192,0.180062061461015,0.946978942340841,0.196764231747404,0.308534225774757,0,0,0,0,0.32833492815819,0.162137619091711,0.292399974850665,0,0.268412837520744,15.9820360908737,9.46722433889417,0,0.264450566663544,0,1.39342003116263,0.515469845288373,0,0.22237804384487,0.380451252225118,1.42358718463353,0.329397909448022,0.502670417600539,0.397912944082302,0.974820435595601,1.79763881730844,0.216138049874694,0.597423819763102,0.379335801906163,1.14248512609729,1.1270773567308,0.8146053113812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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12294 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9Z1L5 | |||
|association_with_transcript=0bp_to_ENSMUST00000022567,NM_009785,uc007sui.1_5end | |||
|cluster_id=chr14:30535021..30535072,- | |||
|description=CAGE_peak_1_at_Cacna2d3_5end | |||
|id=chr14:30535021..30535072,- | |||
|ontology_enrichment_celltype=CL:0000117!6.10e-13!23;CL:0000337!6.10e-13!23;CL:0000540!9.91e-07!33;CL:0000047!9.91e-07!33;CL:0000031!9.91e-07!33;CL:0000404!9.91e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.21e-16,23;CL:0000337,1.21e-16,23;CL:0000540,8.46e-10,33;CL:0000047,8.46e-10,33;CL:0000031,8.46e-10,33;CL:0000404,8.46e-10,33;CL:0000393,4.99e-07,39;CL:0000211,4.99e-07,39;CL:0000221,5.41e-07,44;CL:0000133,5.41e-07,44;CL:0002319,9.55e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.63e-22!52;UBERON:0005068!2.63e-22!52;UBERON:0006241!2.63e-22!52;UBERON:0007135!2.63e-22!52;UBERON:0000033!2.54e-21!63;UBERON:0002346!1.85e-20!71;UBERON:0003075!1.85e-20!71;UBERON:0007284!1.85e-20!71;UBERON:0000955!2.09e-20!50;UBERON:0006238!2.09e-20!50;UBERON:0002616!4.68e-20!49;UBERON:0002020!3.07e-19!34;UBERON:0003056!7.26e-19!49;UBERON:0001017!1.37e-18!73;UBERON:0005743!1.37e-18!73;UBERON:0004121!1.65e-18!102;UBERON:0000924!1.65e-18!102;UBERON:0006601!1.65e-18!102;UBERON:0000073!2.77e-18!75;UBERON:0001016!2.77e-18!75;UBERON:0003080!6.72e-18!40;UBERON:0002780!2.10e-17!39;UBERON:0001890!2.10e-17!39;UBERON:0006240!2.10e-17!39;UBERON:0002791!5.74e-16!29;UBERON:0003528!5.74e-16!29;UBERON:0001893!5.74e-16!29;UBERON:0000956!3.11e-11!21;UBERON:0001869!3.11e-11!21;UBERON:0000203!3.11e-11!21;UBERON:0002619!9.02e-10!17;UBERON:0000153!1.68e-09!94;UBERON:0007811!1.39e-08!86;UBERON:0002021!3.87e-08!10;UBERON:0000411!3.87e-08!10;UBERON:0001950!3.87e-08!10;UBERON:0000468!3.70e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.55e-27,54;UBERON:0001049,1.01e-25,52;UBERON:0005068,1.01e-25,52;UBERON:0006241,1.01e-25,52;UBERON:0007135,1.01e-25,52;UBERON:0002020,5.69e-24,34;UBERON:0002346,6.23e-24,64;UBERON:0003075,6.23e-24,64;UBERON:0007284,6.23e-24,64;UBERON:0001017,9.76e-24,73;UBERON:0001016,1.57e-22,75;UBERON:0010371,4.12e-21,73;UBERON:0000955,4.68e-21,47;UBERON:0006238,4.68e-21,47;UBERON:0002616,1.32e-20,46;UBERON:0004121,9.78e-20,95;UBERON:0000924,9.78e-20,95;UBERON:0006601,9.78e-20,95;UBERON:0003528,1.17e-19,29;UBERON:0002791,1.17e-19,29;UBERON:0001893,1.17e-19,29;UBERON:0003056,1.82e-19,49;UBERON:0003080,3.57e-19,40;UBERON:0002780,1.54e-18,39;UBERON:0001890,1.54e-18,39;UBERON:0006240,1.54e-18,39;UBERON:0000956,1.97e-13,21;UBERON:0001869,1.97e-13,21;UBERON:0000203,1.97e-13,21;UBERON:0010314,9.04e-13,92;UBERON:0002619,1.77e-11,17;UBERON:0002021,2.78e-10,10;UBERON:0000411,2.78e-10,10;UBERON:0001950,2.78e-10,10;UBERON:0002420,1.77e-07,8;UBERON:0007245,1.77e-07,8;UBERON:0010009,1.77e-07,8;UBERON:0010011,1.77e-07,8;UBERON:0000454,1.77e-07,8;UBERON:0003076,4.35e-07,12;UBERON:0003057,4.35e-07,12 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0.157731082679119,0,0,3.31668831589172,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.388859798148567,0,0,0,0,0,0,0,0,6.47412674750713,3.70293685490423,7.60597684207415,0,0,0,0,0,1.49800055259202,1.53687322128622,3.21437798156281,1.62007125998029,2.10324961351382,7.9982275633065,8.61387309711293,4.89963196859816,4.60058260887535,3.67687514644008,3.30347642998166,9.44886301830389,8.1411462625809,7.78129097608144,6.58711033937349,7.8137005583514,3.62937898701795,6.19038871034848,6.1119299110724,13.258286346315,11.9592211871246,8.38797506213853,0.302904773332736,0.377857800533928,0.289864488701678,0,0,0.539703191637817,0,0,0.983110940922263,0,0,0,1.69012103732017,0,0,0,0,0.506719730950197,0,0.22836775943812,0.517875767294343,0.742210695324124,0.693941307064543,0,1.38369298353635,0.452167921657868,0.705532242814229,0.502666365318702,0.247194967734374,0.289198713839823,0,0,0.220841518460394,0.484875253135222,0,3.51336956413857,8.58731497935166,0.510914110417183,0,0,0,3.59497534571574,25.6200337578431,30.1570445070875,15.1227158567281,25.3158302757027,7.06479351502504,18.0087802005211,1.52759045775474,1.24406970610093,1.51633655060205,0.420883711772948,0.130120442962704,0.459804208866946,1.44049703844279,3.91832526372859,2.65342346690179,2.0498195245576,2.81105173679186,2.06962696591213,0.215567992932842,0.189106080167819,1.93546236580344,0.876782929710299,3.61461423993277,2.089512999133,1.4404749548556,0.59710280045548,0,0,0,0.621377317606506,0.469052119962192,0.180062061461015,0.946978942340841,0.196764231747404,0.308534225774757,0,0,0,0,0.32833492815819,0.162137619091711,0.292399974850665,0,0.268412837520744,15.9820360908737,9.46722433889417,0,0.264450566663544,0,1.39342003116263,0.515469845288373,0,0.22237804384487,0.380451252225118,1.42358718463353,0.329397909448022,0.502670417600539,0.397912944082302,0.974820435595601,1.79763881730844,0.216138049874694,0.597423819763102,0.379335801906163,1.14248512609729,1.1270773567308,0.814605311381257,1.16371492300575,1.05203729835478,0.316182685621286,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.757965647081939,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,0.476087281772027,0,1.10344600874334,1.55025282754142,2.23236676120482,0.491589944147214,0.345369963731791,0.144649058581512,0,0,0,0,8.18808008937739,9.49414661396846,0,0.504941854408746,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0,2.24924921495265,1.98716119291576,0.890328018336276,3.09485222771795,1.81467135269789,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0.632073515871632,0,0,0.680879211507576,1.08036656418786,0.646793418913773,0.857348140126369,1.06404140185364,1.78368817602071,3.1264313914403,0.608929898229199,0,1.0591603543191,0.220528398054962,0.65954501176592,0.807322133479528,0.904693873922338,1.07435109602823,0.656563598980245,1.1659233465194,9.82754100655701,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0,0,0,0.138199973804424,0,0.158167996790568,2.03319467126849,0.756037385752609,0.627264888043406,0.87345025498471,1.61837215661785,2.0663363931334,1.04702376793612,0.648074866458964,0,0,0,0.496375471371293,0.388902376688095,0.774958940866387,0.506868376472335,0,0.2604087696879,0.943734099831398,0.483168241652012,0.288030006257865,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,1.73870634628971,0.375364950902364,3.47988086107804,0.643105137237198,0,9.03602948187307,18.8733346967943,13.1765968091061,24.2312987104599,10.2762377965596,15.8632718451837,10.8003600037089,10.8077088773813,12.6879874515577,14.497288729051,0.726511433089237,6.78342284781753,5.63420898988643,2.67417388775123,2.09613162627982,2.20612210140017,2.66696073361938,1.03017528619447,2.24643446714271,3.03236654116557,2.02783439912192,2.82939512079114,2.34103768674706,2.62503124859964,2.69946704091382,1.90517476513229,3.1288768005111,3.47236596834669,1.64834360321323,2.94397840268795,1.37147700954166,1.4198064492747,2.86123427936785,2.18019624948493,3.10560955370591,2.03075058940024,2.74391959309159,2.10455769150274,2.8518863907631,1.68342681497322,2.72860541685601,2.9551344712669,1.22769312950907,1.70430525304563,3.08650577569826,5.9954538705107,2.8071793013449,3.00819475667618,0.191288332068843,0.661774257358546,0.231867835620421 | |||
|short_description=p1@Cacna2d3 | |||
}} |
Revision as of 05:02, 4 August 2015
Short description: | p1@Cacna2d3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cacna2d3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000022567, NM_009785, uc007sui.1_5end |
EntrezGene: | 12294 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.21e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.21e-16 | 23 |
neuron | 8.46e-10 | 33 |
neuronal stem cell | 8.46e-10 | 33 |
neuroblast | 8.46e-10 | 33 |
electrically signaling cell | 8.46e-10 | 33 |
electrically responsive cell | 4.99e-07 | 39 |
electrically active cell | 4.99e-07 | 39 |
ectodermal cell | 5.41e-07 | 44 |
neurectodermal cell | 5.41e-07 | 44 |
neural cell | 9.55e-07 | 43 |