FFCP PHASE1:Mm9::chr3:87710764..87710778,+: Difference between revisions
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{{FFCP|EntrezGene=15191|HGNC=|UniProt=E0CXA0|association_with_transcript=0bp_to_ENSMUST00000159492_5end|description=CAGE_peak_7_at_Hdgf_5end|id=chr3:87710764..87710778,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,4.66e-11,8;CL:0000333,1.40e-08,10;CL:0000095,1.40e-08,10;CL:0000243,1.40e-08,10;CL:0000123,1.40e-08,10;CL:0000125,1.40e-08,10;CL:0000030,1.40e-08,10;CL:0000339,1.40e-08,10;CL:0000128,9.55e-08,6;CL:0000126,9.55e-08,6;CL:0000127,9.55e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.06e-13!73;UBERON:0005743!4.06e-13!73;UBERON:0004121!5.85e-13!102;UBERON:0000924!5.85e-13!102;UBERON:0006601!5.85e-13!102;UBERON:0000073!1.46e-12!75;UBERON:0001016!1.46e-12!75;UBERON:0004111!1.69e-11!122;UBERON:0000025!5.39e-11!114;UBERON:0002346!1.98e-10!71;UBERON:0003075!1.98e-10!71;UBERON:0007284!1.98e-10!71;UBERON:0000955!1.35e-09!50;UBERON:0006238!1.35e-09!50;UBERON:0000033!2.07e-09!63;UBERON:0001049!2.35e-09!52;UBERON:0005068!2.35e-09!52;UBERON:0006241!2.35e-09!52;UBERON:0007135!2.35e-09!52;UBERON:0002616!4.44e-09!49|ontology_enrichment_uberon_v019_2=UBERON:0000955,4.57e-11,47;UBERON:0006238,4.57e-11,47;UBERON:0001017,1.85e-10,73;UBERON:0002616,3.97e-10,46;UBERON:0001016,5.32e-10,75;UBERON:0000073,8.17e-10,54;UBERON:0001049,2.10e-09,52;UBERON:0005068,2.10e-09,52;UBERON:0006241,2.10e-09,52;UBERON:0007135,2.10e-09,52;UBERON:0000025,7.47e-09,114;UBERON:0004121,8.46e-09,95;UBERON:0000924,8.46e-09,95;UBERON:0006601,8.46e-09,95;UBERON:0004111,1.43e-08,122;UBERON:0002346,2.58e-08,64;UBERON:0003075,2.58e-08,64;UBERON:0007284,2.58e-08,64;UBERON:0010314,8.98e-08,92;UBERON:0004733,3.45e-07,6;UBERON:0004732,3.45e-07,6;UBERON:0002028,3.45e-07,6;UBERON:0007277,3.45e-07,6|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0.404950534779652,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0,1.56478268869608,1.96222640742402,2.19686182734472,3.4997381833371,0.699932108126813,1.43752564364972,0,0.725362142011344,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0.988866362566974,0,1.79760066311043,4.61061966385865,0.207379224616955,0,0,0.285650984403804,0.441737081903227,0,0,0.919218786610021,1.10115880999389,1.14918604276669,0.614426133024974,0.131886287730194,0.182975287204819,0,1.11673199600552,1.12552522006336,1.37518422999129,0.589257170947335,0.427115042397309,0.186399445825301,0.075726193333184,0,0.289864488701678,1.72084775396277,2.03991400112325,4.31762553310254,1.29955283489534,2.68816132258401,1.40444420131752,1.1930122580464,0.779358013808606,0,0.14084341977668,0,0,0,0,0,0,1.37020655662872,0,0.445326417194474,0,0.304465478312141,0.230615497256059,0.301445281105245,0.117588707135705,2.01066546127481,0,4.33798070759735,0,0.161766849947409,0.662524555381181,0.484875253135222,0,2.92780797011547,0.83778682725382,0,0,0.599902730993408,0.127070227073065,1.64769703345305,0,0,1.04294592115366,0,1.66230435647648,1.46017136760982,0,0.248813941220186,0,1.05220927943237,0.260240885925407,0.229902104433473,0.180062129805349,0,0.136072998302656,0,0,1.29351685369508,0,0,0.351902248327898,0,0.278047249225598,0,0.205782136407943,0,0.702213187313235,0.51469581422943,0,0,0,0.180062061461015,0.23674473558521,0.393528463494808,0,0.465067889500816,0.804820204198858,0.233530684734339,0.658239399653922,0.985004784474571,1.05389452409612,0.438599962275997,3.07370161407471,3.35516046900929,0.420579897128254,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0.379335801906163,0,0,0,0,0.210407459670956,0.252946148497029,1.32849133181642,1.255989822731,3.08492909804501,1.77871576252289,0,0,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0.252578877947112,1.97337154874103,1.4473305640901,0.554259570499814,0,0.162964976442026,0,0,0,0.238043640886014,0,0.630540576424764,0,0.159454768657487,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,0.827810238914197,1.44495530989013,1.05490517932983,0,2.52470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0.668396022247182,0,0,0,0.395287777946524,1.60660658210904,0.141940085208269,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0.356737635204141,0.493647061806363,0,0,0,0.220528398054962,0.98931751764888,0,0.180938774784468,0.238744688006273,0,0,1.29797711407357,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0.414599921413271,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0.26175594198403,0,0,1.12738587736838,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0.724752362478018,0.864090018773596,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,2.72076460338254,0,0.0897138566094757,0,0.579568782096571,0.375364950902364,0,0.214368379079066,0,0,1.38097570952153,1.71868654031819,0.515559547031063,0.685082519770642,2.2661816921691,1.35004500046361,1.35096360967266,2.71885445390523,0.51776031175182,0,0,0,0,0,0,0.44449345560323,0,0.64183841918363,0,0,0,0.0936415074698824,0.256100609619477,0.34461281373368,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0.290692833264657,0.188218760830661,0.169229215783353,0,0,0.135804113845862,0,0,0.29551344712669,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0.765153328275374,1.10295709559758,0.695603506861264|short_description=p7@Hdgf}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15191 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E0CXA0 | |||
|association_with_transcript=0bp_to_ENSMUST00000159492_5end | |||
|cluster_id=chr3:87710764..87710778,+ | |||
|description=CAGE_peak_7_at_Hdgf_5end | |||
|id=chr3:87710764..87710778,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,4.66e-11,8;CL:0000333,1.40e-08,10;CL:0000095,1.40e-08,10;CL:0000243,1.40e-08,10;CL:0000123,1.40e-08,10;CL:0000125,1.40e-08,10;CL:0000030,1.40e-08,10;CL:0000339,1.40e-08,10;CL:0000128,9.55e-08,6;CL:0000126,9.55e-08,6;CL:0000127,9.55e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.06e-13!73;UBERON:0005743!4.06e-13!73;UBERON:0004121!5.85e-13!102;UBERON:0000924!5.85e-13!102;UBERON:0006601!5.85e-13!102;UBERON:0000073!1.46e-12!75;UBERON:0001016!1.46e-12!75;UBERON:0004111!1.69e-11!122;UBERON:0000025!5.39e-11!114;UBERON:0002346!1.98e-10!71;UBERON:0003075!1.98e-10!71;UBERON:0007284!1.98e-10!71;UBERON:0000955!1.35e-09!50;UBERON:0006238!1.35e-09!50;UBERON:0000033!2.07e-09!63;UBERON:0001049!2.35e-09!52;UBERON:0005068!2.35e-09!52;UBERON:0006241!2.35e-09!52;UBERON:0007135!2.35e-09!52;UBERON:0002616!4.44e-09!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,4.57e-11,47;UBERON:0006238,4.57e-11,47;UBERON:0001017,1.85e-10,73;UBERON:0002616,3.97e-10,46;UBERON:0001016,5.32e-10,75;UBERON:0000073,8.17e-10,54;UBERON:0001049,2.10e-09,52;UBERON:0005068,2.10e-09,52;UBERON:0006241,2.10e-09,52;UBERON:0007135,2.10e-09,52;UBERON:0000025,7.47e-09,114;UBERON:0004121,8.46e-09,95;UBERON:0000924,8.46e-09,95;UBERON:0006601,8.46e-09,95;UBERON:0004111,1.43e-08,122;UBERON:0002346,2.58e-08,64;UBERON:0003075,2.58e-08,64;UBERON:0007284,2.58e-08,64;UBERON:0010314,8.98e-08,92;UBERON:0004733,3.45e-07,6;UBERON:0004732,3.45e-07,6;UBERON:0002028,3.45e-07,6;UBERON:0007277,3.45e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0.404950534779652,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0,1.56478268869608,1.96222640742402,2.19686182734472,3.4997381833371,0.699932108126813,1.43752564364972,0,0.725362142011344,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0.988866362566974,0,1.79760066311043,4.61061966385865,0.207379224616955,0,0,0.285650984403804,0.441737081903227,0,0,0.919218786610021,1.10115880999389,1.14918604276669,0.614426133024974,0.131886287730194,0.182975287204819,0,1.11673199600552,1.12552522006336,1.37518422999129,0.589257170947335,0.427115042397309,0.186399445825301,0.075726193333184,0,0.289864488701678,1.72084775396277,2.03991400112325,4.31762553310254,1.29955283489534,2.68816132258401,1.40444420131752,1.1930122580464,0.779358013808606,0,0.14084341977668,0,0,0,0,0,0,1.37020655662872,0,0.445326417194474,0,0.304465478312141,0.230615497256059,0.301445281105245,0.117588707135705,2.01066546127481,0,4.33798070759735,0,0.161766849947409,0.662524555381181,0.484875253135222,0,2.92780797011547,0.83778682725382,0,0,0.599902730993408,0.127070227073065,1.64769703345305,0,0,1.04294592115366,0,1.66230435647648,1.46017136760982,0,0.248813941220186,0,1.05220927943237,0.260240885925407,0.229902104433473,0.180062129805349,0,0.136072998302656,0,0,1.29351685369508,0,0,0.351902248327898,0,0.278047249225598,0,0.205782136407943,0,0.702213187313235,0.51469581422943,0,0,0,0.180062061461015,0.23674473558521,0.393528463494808,0,0.465067889500816,0.804820204198858,0.233530684734339,0.658239399653922,0.985004784474571,1.05389452409612,0.438599962275997,3.07370161407471,3.35516046900929,0.420579897128254,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0.379335801906163,0,0,0,0,0.210407459670956,0.252946148497029,1.32849133181642,1.255989822731,3.08492909804501,1.77871576252289,0,0,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0.252578877947112,1.97337154874103,1.4473305640901,0.554259570499814,0,0.162964976442026,0,0,0,0.238043640886014,0,0.630540576424764,0,0.159454768657487,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,0.827810238914197,1.44495530989013,1.05490517932983,0,2.52470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0.668396022247182,0,0,0,0.395287777946524,1.60660658210904,0.141940085208269,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0.356737635204141,0.493647061806363,0,0,0,0.220528398054962,0.98931751764888,0,0.180938774784468,0.238744688006273,0,0,1.29797711407357,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0.414599921413271,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0.26175594198403,0,0,1.12738587736838,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0.724752362478018,0.864090018773596,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,2.72076460338254,0,0.0897138566094757,0,0.579568782096571,0.375364950902364,0,0.214368379079066,0,0,1.38097570952153,1.71868654031819,0.515559547031063,0.685082519770642,2.2661816921691,1.35004500046361,1.35096360967266,2.71885445390523,0.51776031175182,0,0,0,0,0,0,0.44449345560323,0,0.64183841918363,0,0,0,0.0936415074698824,0.256100609619477,0.34461281373368,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0.290692833264657,0.188218760830661,0.169229215783353,0,0,0.135804113845862,0,0,0.29551344712669,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0.765153328275374,1.10295709559758,0.695603506861264 | |||
|short_description=p7@Hdgf | |||
}} |
Revision as of 03:19, 4 August 2015
Short description: | p7@Hdgf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Hdgf_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000159492_5end |
EntrezGene: | 15191 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 4.66e-11 | 8 |
migratory neural crest cell | 1.40e-08 | 10 |
neuron associated cell | 1.40e-08 | 10 |
glial cell (sensu Vertebrata) | 1.40e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 1.40e-08 | 10 |
glial cell | 1.40e-08 | 10 |
glioblast | 1.40e-08 | 10 |
glioblast (sensu Vertebrata) | 1.40e-08 | 10 |
oligodendrocyte | 9.55e-08 | 6 |
macroglial cell | 9.55e-08 | 6 |
astrocyte | 9.55e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
brain | 4.57e-11 | 47 |
future brain | 4.57e-11 | 47 |
central nervous system | 1.85e-10 | 73 |
regional part of brain | 3.97e-10 | 46 |
nervous system | 5.32e-10 | 75 |
regional part of nervous system | 8.17e-10 | 54 |
neural tube | 2.10e-09 | 52 |
neural rod | 2.10e-09 | 52 |
future spinal cord | 2.10e-09 | 52 |
neural keel | 2.10e-09 | 52 |
tube | 7.47e-09 | 114 |
ectoderm-derived structure | 8.46e-09 | 95 |
ectoderm | 8.46e-09 | 95 |
presumptive ectoderm | 8.46e-09 | 95 |
anatomical conduit | 1.43e-08 | 122 |
neurectoderm | 2.58e-08 | 64 |
neural plate | 2.58e-08 | 64 |
presumptive neural plate | 2.58e-08 | 64 |
structure with developmental contribution from neural crest | 8.98e-08 | 92 |
segmental subdivision of hindbrain | 3.45e-07 | 6 |
segmental subdivision of nervous system | 3.45e-07 | 6 |
hindbrain | 3.45e-07 | 6 |
presumptive hindbrain | 3.45e-07 | 6 |