FFCP PHASE1:Mm9::chr19:4214351..4214363,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=56708|HGNC=|MCL_coexpression_id=1728|UniProt=Q9QZM3,Q3TM06|association_with_transcript=-28bp_to_NM_019952,uc008fzj.1,uc008fzk.1,uc008fzl.1_5end|description=CAGE_peak_4_at_Clcf1_5end|id=chr19:4214351..4214363,+|ontology_enrichment_celltype=CL:0000838!4.54e-11!12;CL:0002031!1.97e-10!25;CL:0000084!3.19e-10!11;CL:0000827!3.19e-10!11;CL:0000219!5.64e-10!54;CL:0000542!7.65e-10!13;CL:0000051!7.65e-10!13;CL:0000791!2.30e-09!9;CL:0000789!2.30e-09!9;CL:0002420!2.30e-09!9;CL:0002419!2.30e-09!9;CL:0000790!2.30e-09!9;CL:0000988!1.78e-08!32;CL:0002032!1.78e-08!32;CL:0000037!1.78e-08!32;CL:0000566!1.78e-08!32;CL:0000837!1.78e-08!32;CL:0000624!1.89e-08!8;CL:0002320!2.74e-08!46;CL:0000134!2.74e-08!46;CL:0000738!1.28e-07!17;CL:0002087!1.28e-07!17;CL:0000893!8.80e-07!6;CL:0002489!8.80e-07!6;CL:0000898!8.80e-07!6;CL:0000809!8.80e-07!6;CL:0000810!8.80e-07!6;CL:0000895!8.80e-07!6;CL:0000808!8.80e-07!6;CL:0000894!8.80e-07!6;CL:0000806!8.80e-07!6;CL:0000807!8.80e-07!6;CL:0000805!8.80e-07!6;CL:0002425!8.80e-07!6;CL:0002436!8.80e-07!6;CL:0002427!8.80e-07!6;CL:0002428!8.80e-07!6;CL:0002429!8.80e-07!6;CL:0002433!8.80e-07!6;CL:0002431!8.80e-07!6;CL:0002432!8.80e-07!6|ontology_enrichment_celltype_v019_2=CL:0000791,5.70e-24,9;CL:0000789,5.70e-24,9;CL:0002420,5.70e-24,9;CL:0002419,5.70e-24,9;CL:0000790,5.70e-24,9;CL:0000838,5.46e-23,12;CL:0000542,3.78e-21,13;CL:0000051,3.78e-21,13;CL:0002031,2.36e-20,25;CL:0000624,5.92e-20,8;CL:0000084,1.73e-19,11;CL:0000827,1.73e-19,11;CL:0000219,4.29e-19,54;CL:0000893,7.34e-19,6;CL:0002489,7.34e-19,6;CL:0000898,7.34e-19,6;CL:0000809,7.34e-19,6;CL:0000810,7.34e-19,6;CL:0000895,7.34e-19,6;CL:0000808,7.34e-19,6;CL:0000894,7.34e-19,6;CL:0000806,7.34e-19,6;CL:0000807,7.34e-19,6;CL:0000805,7.34e-19,6;CL:0002425,7.34e-19,6;CL:0002436,7.34e-19,6;CL:0002427,7.34e-19,6;CL:0002428,7.34e-19,6;CL:0002429,7.34e-19,6;CL:0002433,7.34e-19,6;CL:0002431,7.34e-19,6;CL:0002432,7.34e-19,6;CL:0000738,6.06e-16,17;CL:0002087,6.06e-16,17;CL:0000988,1.58e-15,32;CL:0002032,1.58e-15,32;CL:0000037,1.58e-15,32;CL:0000837,1.58e-15,32;CL:0002320,1.45e-14,46;CL:0000134,1.45e-14,46;CL:0000217,1.63e-10,2;CL:0000328,1.63e-10,2;CL:0002573,1.63e-10,2;CL:0002376,1.63e-10,2;CL:0000218,1.63e-10,2;CL:0000692,1.63e-10,2;CL:0002377,1.63e-10,2;CL:0002375,1.63e-10,2;CL:0000034,5.58e-08,97;CL:0000553,1.24e-07,6;CL:0000556,1.24e-07,6;CL:0000215,2.81e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.74e-08!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.45e-14,46|phase1_expression=0,0,0,0,0,0,0,1.67860320474049,4.36445038670167,2.34064526321993,1.02730780935303,0.638177271962691,2.05440875917447,3.05971408466491,0.333109761815663,0.404950534779652,0.699561878128147,2.5236973228659,2.60517423850904,2.54633791078818,0.0850432901510698,0.198581902401771,0.522399578277871,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.608261587317087,0.550640256485045,1.56478268869608,0.218025156380447,0.659058548203415,0,0,0,1.34226084846189,0.725362142011344,2.35265659399725,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2251073399897,2.41828992341714,0.289864488701678,0,0.679971333707751,0,0,0.448026887097336,0.280888840263504,1.53387290320252,2.33807404142582,0,0.14084341977668,0,0,0,1.08245520505607,0.506719730950197,0.505524445014783,0,1.55362730188303,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0.599075622529601,0,0.254140454146129,0,0,0,0,0,0.20778804455956,0,0.509196819251581,0,0,0,0,0.229902104433473,0.180062129805349,0,0.136072998302656,0,0,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0.268412837520744,0,0,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.379419222745544,0.147610147979602,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0.723245292907558,0,0,0,0.275936746304732,0,0,0.163934945376675,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0.283880170416537,0.712262414669021,0.162886959353576,0,0,0,0.302323556964751,0,0,0.614870295887855,0,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0.42366414172764,0,0,0.484393280087717,0,0,0,0,0,0.512612642393558,0,0.185194527369712,0.376736914009382,0.27338845544205,0.457556346413045,1.18984900995699,0.69975726161829,1.10559979043539,0,0.316335993581135,0.203319467126849,0.216010681643603,0,0,0,0.0826534557253359,0,0,0,0,0.448549638131936,0.165458490457098,0,0,0,0,0.2604087696879,0,0.241584120826006,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0.350630706544707,0,0,0,0,0.579568782096571,0.375364950902364,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0.377252682772152,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.354951612318675,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0,0|short_description=p4@Clcf1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:56708 | |||
|HGNC= | |||
|MCL_coexpression_id=1728 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9QZM3,uniprot:Q3TM06 | |||
|association_with_transcript=-28bp_to_NM_019952,uc008fzj.1,uc008fzk.1,uc008fzl.1_5end | |||
|cluster_id=chr19:4214351..4214363,+ | |||
|description=CAGE_peak_4_at_Clcf1_5end | |||
|id=chr19:4214351..4214363,+ | |||
|ontology_enrichment_celltype=CL:0000838!4.54e-11!12;CL:0002031!1.97e-10!25;CL:0000084!3.19e-10!11;CL:0000827!3.19e-10!11;CL:0000219!5.64e-10!54;CL:0000542!7.65e-10!13;CL:0000051!7.65e-10!13;CL:0000791!2.30e-09!9;CL:0000789!2.30e-09!9;CL:0002420!2.30e-09!9;CL:0002419!2.30e-09!9;CL:0000790!2.30e-09!9;CL:0000988!1.78e-08!32;CL:0002032!1.78e-08!32;CL:0000037!1.78e-08!32;CL:0000566!1.78e-08!32;CL:0000837!1.78e-08!32;CL:0000624!1.89e-08!8;CL:0002320!2.74e-08!46;CL:0000134!2.74e-08!46;CL:0000738!1.28e-07!17;CL:0002087!1.28e-07!17;CL:0000893!8.80e-07!6;CL:0002489!8.80e-07!6;CL:0000898!8.80e-07!6;CL:0000809!8.80e-07!6;CL:0000810!8.80e-07!6;CL:0000895!8.80e-07!6;CL:0000808!8.80e-07!6;CL:0000894!8.80e-07!6;CL:0000806!8.80e-07!6;CL:0000807!8.80e-07!6;CL:0000805!8.80e-07!6;CL:0002425!8.80e-07!6;CL:0002436!8.80e-07!6;CL:0002427!8.80e-07!6;CL:0002428!8.80e-07!6;CL:0002429!8.80e-07!6;CL:0002433!8.80e-07!6;CL:0002431!8.80e-07!6;CL:0002432!8.80e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.70e-24,9;CL:0000789,5.70e-24,9;CL:0002420,5.70e-24,9;CL:0002419,5.70e-24,9;CL:0000790,5.70e-24,9;CL:0000838,5.46e-23,12;CL:0000542,3.78e-21,13;CL:0000051,3.78e-21,13;CL:0002031,2.36e-20,25;CL:0000624,5.92e-20,8;CL:0000084,1.73e-19,11;CL:0000827,1.73e-19,11;CL:0000219,4.29e-19,54;CL:0000893,7.34e-19,6;CL:0002489,7.34e-19,6;CL:0000898,7.34e-19,6;CL:0000809,7.34e-19,6;CL:0000810,7.34e-19,6;CL:0000895,7.34e-19,6;CL:0000808,7.34e-19,6;CL:0000894,7.34e-19,6;CL:0000806,7.34e-19,6;CL:0000807,7.34e-19,6;CL:0000805,7.34e-19,6;CL:0002425,7.34e-19,6;CL:0002436,7.34e-19,6;CL:0002427,7.34e-19,6;CL:0002428,7.34e-19,6;CL:0002429,7.34e-19,6;CL:0002433,7.34e-19,6;CL:0002431,7.34e-19,6;CL:0002432,7.34e-19,6;CL:0000738,6.06e-16,17;CL:0002087,6.06e-16,17;CL:0000988,1.58e-15,32;CL:0002032,1.58e-15,32;CL:0000037,1.58e-15,32;CL:0000837,1.58e-15,32;CL:0002320,1.45e-14,46;CL:0000134,1.45e-14,46;CL:0000217,1.63e-10,2;CL:0000328,1.63e-10,2;CL:0002573,1.63e-10,2;CL:0002376,1.63e-10,2;CL:0000218,1.63e-10,2;CL:0000692,1.63e-10,2;CL:0002377,1.63e-10,2;CL:0002375,1.63e-10,2;CL:0000034,5.58e-08,97;CL:0000553,1.24e-07,6;CL:0000556,1.24e-07,6;CL:0000215,2.81e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.74e-08!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.45e-14,46 | |||
|phase1_expression=0,0,0,0,0,0,0,1.67860320474049,4.36445038670167,2.34064526321993,1.02730780935303,0.638177271962691,2.05440875917447,3.05971408466491,0.333109761815663,0.404950534779652,0.699561878128147,2.5236973228659,2.60517423850904,2.54633791078818,0.0850432901510698,0.198581902401771,0.522399578277871,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.608261587317087,0.550640256485045,1.56478268869608,0.218025156380447,0.659058548203415,0,0,0,1.34226084846189,0.725362142011344,2.35265659399725,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2251073399897,2.41828992341714,0.289864488701678,0,0.679971333707751,0,0,0.448026887097336,0.280888840263504,1.53387290320252,2.33807404142582,0,0.14084341977668,0,0,0,1.08245520505607,0.506719730950197,0.505524445014783,0,1.55362730188303,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0.599075622529601,0,0.254140454146129,0,0,0,0,0,0.20778804455956,0,0.509196819251581,0,0,0,0,0.229902104433473,0.180062129805349,0,0.136072998302656,0,0,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0.268412837520744,0,0,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.379419222745544,0.147610147979602,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0.723245292907558,0,0,0,0.275936746304732,0,0,0.163934945376675,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0.283880170416537,0.712262414669021,0.162886959353576,0,0,0,0.302323556964751,0,0,0.614870295887855,0,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0.42366414172764,0,0,0.484393280087717,0,0,0,0,0,0.512612642393558,0,0.185194527369712,0.376736914009382,0.27338845544205,0.457556346413045,1.18984900995699,0.69975726161829,1.10559979043539,0,0.316335993581135,0.203319467126849,0.216010681643603,0,0,0,0.0826534557253359,0,0,0,0,0.448549638131936,0.165458490457098,0,0,0,0,0.2604087696879,0,0.241584120826006,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0.350630706544707,0,0,0,0,0.579568782096571,0.375364950902364,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0.377252682772152,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.354951612318675,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p4@Clcf1 | |||
}} |
Revision as of 02:58, 4 August 2015
Short description: | p4@Clcf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Clcf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1728 |
Association with transcript: | -28bp_to_NM_019952, uc008fzj.1, uc008fzk.1, uc008fzl.1_5end |
EntrezGene: | 56708 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.45e-14 | 46 |