FFCP PHASE1:Mm9::chr8:74685000..74685046,+: Difference between revisions
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{{FFCP|EntrezGene=17274|HGNC=|MCL_coexpression_id=0|UniProt=P55258,Q0PD50,Q8BKQ0|association_with_transcript=-52bp_to_ENSMUST00000003121,NM_023126,uc009mfj.1,uc009mfk.1_5end|description=CAGE_peak_4_at_Rab8a_5end|id=chr8:74685000..74685046,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,1.88e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.88e-08,3;UBERON:0002275,1.88e-08,3;UBERON:0000473,2.55e-07,14;UBERON:0003135,6.77e-07,15|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0.174840804837995,0.333109761815663,0,0,0,0.137114433605739,0,1.7008658030214,0,0,0.159992422793407,0,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0,0,0,0,1.10115880999389,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0.41557608911912,0.162241263067758,0.101839363850316,0,0.252722758433675,0,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0.36012412292203,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0.156998727841375,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.535106452806212,0,0,0,0.42366414172764,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,27.0572610568411,0,0,0,0,0,0,0,0.104859344425711,0.483168241652012,6.91272015018877,0,0,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0,0.194915761479505,0,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0.249810577937946,0,0,0,0,0|short_description=p4@Rab8a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17274 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P55258,uniprot:Q0PD50,uniprot:Q8BKQ0 | |||
|association_with_transcript=-52bp_to_ENSMUST00000003121,NM_023126,uc009mfj.1,uc009mfk.1_5end | |||
|cluster_id=chr8:74685000..74685046,+ | |||
|description=CAGE_peak_4_at_Rab8a_5end | |||
|id=chr8:74685000..74685046,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.88e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.88e-08,3;UBERON:0002275,1.88e-08,3;UBERON:0000473,2.55e-07,14;UBERON:0003135,6.77e-07,15 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0.174840804837995,0.333109761815663,0,0,0,0.137114433605739,0,1.7008658030214,0,0,0.159992422793407,0,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0,0,0,0,1.10115880999389,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0.41557608911912,0.162241263067758,0.101839363850316,0,0.252722758433675,0,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0.36012412292203,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0.156998727841375,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.535106452806212,0,0,0,0.42366414172764,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,27.0572610568411,0,0,0,0,0,0,0,0.104859344425711,0.483168241652012,6.91272015018877,0,0,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0,0.194915761479505,0,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p4@Rab8a | |||
}} |
Revision as of 02:25, 4 August 2015
Short description: | p4@Rab8a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rab8a_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -52bp_to_ENSMUST00000003121, NM_023126, uc009mfj.1, uc009mfk.1_5end |
EntrezGene: | 17274 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.88e-08 | 3 |
reticular formation | 1.88e-08 | 3 |
testis | 2.55e-07 | 14 |
male reproductive organ | 6.77e-07 | 15 |