FFCP PHASE1:Mm9::chr5:148768886..148768933,+: Difference between revisions
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{{FFCP|EntrezGene=77521|HGNC=|MCL_coexpression_id=39|UniProt=Q3UHD3,D3YZ59|association_with_transcript=0bp_to_ENSMUST00000085558,ENSMUST00000110518,ENSMUST00000129092,NM_029920,uc009aon.2_5end|description=CAGE_peak_4_at_Mtus2_5end|id=chr5:148768886..148768933,+|ontology_enrichment_celltype=CL:0000117!2.58e-11!23;CL:0000337!2.58e-11!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.35e-13,23;CL:0000337,2.35e-13,23;CL:0000540,1.45e-08,33;CL:0000047,1.45e-08,33;CL:0000031,1.45e-08,33;CL:0000404,1.45e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!4.44e-24!63;UBERON:0001049!9.36e-23!52;UBERON:0005068!9.36e-23!52;UBERON:0006241!9.36e-23!52;UBERON:0007135!9.36e-23!52;UBERON:0002346!6.30e-22!71;UBERON:0003075!6.30e-22!71;UBERON:0007284!6.30e-22!71;UBERON:0000955!2.90e-21!50;UBERON:0006238!2.90e-21!50;UBERON:0002616!1.41e-20!49;UBERON:0003056!2.14e-20!49;UBERON:0001017!1.77e-18!73;UBERON:0005743!1.77e-18!73;UBERON:0000073!3.06e-17!75;UBERON:0001016!3.06e-17!75;UBERON:0003080!5.62e-17!40;UBERON:0002020!1.55e-16!34;UBERON:0004121!2.75e-16!102;UBERON:0000924!2.75e-16!102;UBERON:0006601!2.75e-16!102;UBERON:0002780!3.32e-16!39;UBERON:0001890!3.32e-16!39;UBERON:0006240!3.32e-16!39;UBERON:0000025!1.42e-13!114;UBERON:0002791!1.59e-13!29;UBERON:0003528!1.59e-13!29;UBERON:0001893!1.59e-13!29;UBERON:0004111!4.28e-13!122;UBERON:0007811!8.25e-13!86;UBERON:0000153!8.96e-12!94;UBERON:0000956!3.59e-09!21;UBERON:0001869!3.59e-09!21;UBERON:0000203!3.59e-09!21;UBERON:0002619!7.34e-09!17;UBERON:0002021!3.07e-08!10;UBERON:0000411!3.07e-08!10;UBERON:0001950!3.07e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.76e-29,64;UBERON:0003075,5.76e-29,64;UBERON:0007284,5.76e-29,64;UBERON:0010314,5.45e-27,92;UBERON:0000073,1.22e-26,54;UBERON:0010371,6.18e-26,73;UBERON:0001049,4.46e-25,52;UBERON:0005068,4.46e-25,52;UBERON:0006241,4.46e-25,52;UBERON:0007135,4.46e-25,52;UBERON:0004121,8.39e-25,95;UBERON:0000924,8.39e-25,95;UBERON:0006601,8.39e-25,95;UBERON:0001017,2.89e-24,73;UBERON:0001016,3.34e-23,75;UBERON:0003056,2.68e-22,49;UBERON:0002020,2.69e-21,34;UBERON:0000955,2.26e-20,47;UBERON:0006238,2.26e-20,47;UBERON:0002616,2.03e-19,46;UBERON:0003080,1.04e-16,40;UBERON:0003528,1.12e-16,29;UBERON:0002791,1.12e-16,29;UBERON:0001893,1.12e-16,29;UBERON:0002780,1.19e-15,39;UBERON:0001890,1.19e-15,39;UBERON:0006240,1.19e-15,39;UBERON:0000025,2.40e-13,114;UBERON:0004111,6.99e-13,122;UBERON:0002021,3.12e-12,10;UBERON:0000411,3.12e-12,10;UBERON:0001950,3.12e-12,10;UBERON:0002619,1.04e-11,17;UBERON:0000956,4.27e-10,21;UBERON:0001869,4.27e-10,21;UBERON:0000203,4.27e-10,21;UBERON:0003076,3.51e-09,12;UBERON:0003057,3.51e-09,12;UBERON:0000483,8.05e-09,174;UBERON:0000119,1.57e-08,176;UBERON:0002420,2.97e-08,8;UBERON:0007245,2.97e-08,8;UBERON:0010009,2.97e-08,8;UBERON:0010011,2.97e-08,8;UBERON:0000454,2.97e-08,8;UBERON:0002240,3.44e-07,6;UBERON:0005174,3.44e-07,6;UBERON:0001137,3.44e-07,6;UBERON:0000020,6.69e-07,12;UBERON:0001032,6.69e-07,12;UBERON:0004456,6.69e-07,12|phase1_expression=2.40223270657191,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,7.89034197352431,6.34789175126439,5.70448263155561,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0.810035629990144,0.420649922702764,3.71346279724945,3.97563373712904,1.22490799214954,1.91690942036473,0.919218786610021,5.50579404996943,2.93680877595932,4.14737639791857,4.3522474950964,3.56801810049398,2.08365348222704,3.62937898701795,4.50210088025344,3.51435969886663,4.12480019663135,4.9830088279686,11.183966749518,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,1.26759077799012,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0.470354828542819,0,0.247194967734374,3.03658649531814,0,0,0,0,0,28.6925181071316,22.6202443358531,0,0,0,0,11.5338792341713,7.77751024791665,6.03140890141749,4.69325664519146,6.13717097592793,5.194701113989,5.353961681236,0.101839363850316,0.248813941220186,0.252722758433675,2.94618598241064,0,2.06911893990126,1.62055916824814,1.65775299619287,4.89862793889561,2.8185018462667,4.49768277886698,9.57202471734358,0,0.378212160335639,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,2.60419209143731,0.983821158737019,1.54267112887378,2.09280550275367,3.21928081679543,2.21854150497622,2.13927804887525,1.64167464079095,1.37816976227955,0.292399974850665,1.09775057645525,0.671032093801859,6.72927835405207,5.65975368086064,0,0,0.426576501070468,0.928946687441754,0.77320476793256,0.201683524623343,0.444756087689741,0,0,0.329397909448022,0,0.397912944082302,0.38992817423824,0,0.432276099749388,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66277871149944,0.757965647081939,0.162964976442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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:77521 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3UHD3,uniprot:D3YZ59 | |||
|association_with_transcript=0bp_to_ENSMUST00000085558,ENSMUST00000110518,ENSMUST00000129092,NM_029920,uc009aon.2_5end | |||
|cluster_id=chr5:148768886..148768933,+ | |||
|description=CAGE_peak_4_at_Mtus2_5end | |||
|id=chr5:148768886..148768933,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.58e-11!23;CL:0000337!2.58e-11!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.35e-13,23;CL:0000337,2.35e-13,23;CL:0000540,1.45e-08,33;CL:0000047,1.45e-08,33;CL:0000031,1.45e-08,33;CL:0000404,1.45e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.44e-24!63;UBERON:0001049!9.36e-23!52;UBERON:0005068!9.36e-23!52;UBERON:0006241!9.36e-23!52;UBERON:0007135!9.36e-23!52;UBERON:0002346!6.30e-22!71;UBERON:0003075!6.30e-22!71;UBERON:0007284!6.30e-22!71;UBERON:0000955!2.90e-21!50;UBERON:0006238!2.90e-21!50;UBERON:0002616!1.41e-20!49;UBERON:0003056!2.14e-20!49;UBERON:0001017!1.77e-18!73;UBERON:0005743!1.77e-18!73;UBERON:0000073!3.06e-17!75;UBERON:0001016!3.06e-17!75;UBERON:0003080!5.62e-17!40;UBERON:0002020!1.55e-16!34;UBERON:0004121!2.75e-16!102;UBERON:0000924!2.75e-16!102;UBERON:0006601!2.75e-16!102;UBERON:0002780!3.32e-16!39;UBERON:0001890!3.32e-16!39;UBERON:0006240!3.32e-16!39;UBERON:0000025!1.42e-13!114;UBERON:0002791!1.59e-13!29;UBERON:0003528!1.59e-13!29;UBERON:0001893!1.59e-13!29;UBERON:0004111!4.28e-13!122;UBERON:0007811!8.25e-13!86;UBERON:0000153!8.96e-12!94;UBERON:0000956!3.59e-09!21;UBERON:0001869!3.59e-09!21;UBERON:0000203!3.59e-09!21;UBERON:0002619!7.34e-09!17;UBERON:0002021!3.07e-08!10;UBERON:0000411!3.07e-08!10;UBERON:0001950!3.07e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.76e-29,64;UBERON:0003075,5.76e-29,64;UBERON:0007284,5.76e-29,64;UBERON:0010314,5.45e-27,92;UBERON:0000073,1.22e-26,54;UBERON:0010371,6.18e-26,73;UBERON:0001049,4.46e-25,52;UBERON:0005068,4.46e-25,52;UBERON:0006241,4.46e-25,52;UBERON:0007135,4.46e-25,52;UBERON:0004121,8.39e-25,95;UBERON:0000924,8.39e-25,95;UBERON:0006601,8.39e-25,95;UBERON:0001017,2.89e-24,73;UBERON:0001016,3.34e-23,75;UBERON:0003056,2.68e-22,49;UBERON:0002020,2.69e-21,34;UBERON:0000955,2.26e-20,47;UBERON:0006238,2.26e-20,47;UBERON:0002616,2.03e-19,46;UBERON:0003080,1.04e-16,40;UBERON:0003528,1.12e-16,29;UBERON:0002791,1.12e-16,29;UBERON:0001893,1.12e-16,29;UBERON:0002780,1.19e-15,39;UBERON:0001890,1.19e-15,39;UBERON:0006240,1.19e-15,39;UBERON:0000025,2.40e-13,114;UBERON:0004111,6.99e-13,122;UBERON:0002021,3.12e-12,10;UBERON:0000411,3.12e-12,10;UBERON:0001950,3.12e-12,10;UBERON:0002619,1.04e-11,17;UBERON:0000956,4.27e-10,21;UBERON:0001869,4.27e-10,21;UBERON:0000203,4.27e-10,21;UBERON:0003076,3.51e-09,12;UBERON:0003057,3.51e-09,12;UBERON:0000483,8.05e-09,174;UBERON:0000119,1.57e-08,176;UBERON:0002420,2.97e-08,8;UBERON:0007245,2.97e-08,8;UBERON:0010009,2.97e-08,8;UBERON:0010011,2.97e-08,8;UBERON:0000454,2.97e-08,8;UBERON:0002240,3.44e-07,6;UBERON:0005174,3.44e-07,6;UBERON:0001137,3.44e-07,6;UBERON:0000020,6.69e-07,12;UBERON:0001032,6.69e-07,12;UBERON:0004456,6.69e-07,12 | |||
|phase1_expression=2.40223270657191,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,7.89034197352431,6.34789175126439,5.70448263155561,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0.810035629990144,0.420649922702764,3.71346279724945,3.97563373712904,1.22490799214954,1.91690942036473,0.919218786610021,5.50579404996943,2.93680877595932,4.14737639791857,4.3522474950964,3.56801810049398,2.08365348222704,3.62937898701795,4.50210088025344,3.51435969886663,4.12480019663135,4.9830088279686,11.183966749518,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,1.26759077799012,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0.470354828542819,0,0.247194967734374,3.03658649531814,0,0,0,0,0,28.6925181071316,22.6202443358531,0,0,0,0,11.5338792341713,7.77751024791665,6.03140890141749,4.69325664519146,6.13717097592793,5.194701113989,5.353961681236,0.101839363850316,0.248813941220186,0.252722758433675,2.94618598241064,0,2.06911893990126,1.62055916824814,1.65775299619287,4.89862793889561,2.8185018462667,4.49768277886698,9.57202471734358,0,0.378212160335639,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,2.60419209143731,0.983821158737019,1.54267112887378,2.09280550275367,3.21928081679543,2.21854150497622,2.13927804887525,1.64167464079095,1.37816976227955,0.292399974850665,1.09775057645525,0.671032093801859,6.72927835405207,5.65975368086064,0,0,0.426576501070468,0.928946687441754,0.77320476793256,0.201683524623343,0.444756087689741,0,0,0.329397909448022,0,0.397912944082302,0.38992817423824,0,0.432276099749388,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66277871149944,0.757965647081939,0.162964976442026,1.01847051465113,0.938760993154008,0.167506257441816,0.238043640886014,0.975668239288994,0.788175720530955,1.10732344824387,1.43509291791738,0.655453258862952,0.172684981865896,0.433947175744535,0,0,0,0,4.65596710964597,7.14991288212439,0,0,0,0,0.215423397732799,0,0,0,0,0,0,6.10510501201433,0,0.178065603667255,0.162886959353576,0,0,0,0,0.565815239267694,0.295301892880773,0,0.258428293168221,0.727067458955011,0.712994756769443,0.632073515871632,0,0,7.83011093233712,0.36012218806262,0.258717367565509,0.428674070063185,0.886701168211368,1.24858172321449,0.987294123612726,0.608929898229199,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0,0,0.164140899745061,0,8.15871328846243,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0.209088296014469,0,0.134864346384821,0.41326727862668,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0.202725215290164,0.410843828659309,0,0.537080087002444,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.772758376128762,0,0,0,0,6.7770221114048,4.14292712856459,10.3121192419091,6.18671456437275,6.85082519770642,9.06472676867641,7.42524750254986,4.95353323546643,9.5159905886683,9.31968561153276,0.830298780673413,6.3843979744165,1.53660245178721,0.729320151204882,1.88651846365184,0.183843508450014,0.888986911206461,0.412070114477788,1.60459604795908,0.758091635291392,1.2673964994512,0.943131706930381,0.468207537349412,1.15245274328765,1.20614484806788,2.38146845641537,0.347652977834566,0.964546102318525,1.23625770240992,0.883193520806384,1.02860775715625,1.06485483695602,0.715308569841963,0.872078499793971,1.31753132581463,1.01537529470012,1.46342378298218,0.526139422875686,1.08643291076689,0,0.474540072496697,1.18205378850676,0.409231043169689,0.309873682371932,0.771626443924566,2.99772693525535,0.233931608445408,1.07435527024149,1.14772999241306,0.441182838239031,0.231867835620421 | |||
|short_description=p4@Mtus2 | |||
}} |
Revision as of 02:17, 4 August 2015
Short description: | p4@Mtus2 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Mtus2_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | 0bp_to_ENSMUST00000085558, ENSMUST00000110518, ENSMUST00000129092, NM_029920, uc009aon.2_5end |
EntrezGene: | 77521 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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CNS neuron (sensu Vertebrata) | 2.35e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.35e-13 | 23 |
neuron | 1.45e-08 | 33 |
neuronal stem cell | 1.45e-08 | 33 |
neuroblast | 1.45e-08 | 33 |
electrically signaling cell | 1.45e-08 | 33 |