FFCP PHASE1:Mm9::chr16:7069821..7069830,+: Difference between revisions
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{{FFCP|EntrezGene=268859|HGNC=|MCL_coexpression_id=10|UniProt=Q9JJ43|association_with_transcript=-97bp_to_ENSMUST00000056416,ENSMUST00000092375,ENSMUST00000096292,ENSMUST00000170095,NM_183188,uc007ycf.2,uc007ycg.2,uc007ych.2_5end|description=CAGE_peak_24_at_Rbfox1_5end|id=chr16:7069821..7069830,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!5.86e-19!18;UBERON:0000948!5.86e-19!18;UBERON:0005498!5.86e-19!18;UBERON:0004140!5.86e-19!18;UBERON:0009881!5.86e-19!18;UBERON:0004141!5.86e-19!18;UBERON:0003084!5.86e-19!18;UBERON:0007005!5.86e-19!18;UBERON:0004139!5.86e-19!18;UBERON:0004291!5.86e-19!18;UBERON:0004535!2.39e-14!23;UBERON:0001009!2.39e-14!23;UBERON:0004872!2.51e-09!33;UBERON:0003103!4.71e-08!43;UBERON:0003914!4.59e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.16e-20,18;UBERON:0000948,1.16e-20,18;UBERON:0005498,1.16e-20,18;UBERON:0004140,1.16e-20,18;UBERON:0009881,1.16e-20,18;UBERON:0004141,1.16e-20,18;UBERON:0003084,1.16e-20,18;UBERON:0007005,1.16e-20,18;UBERON:0004139,1.16e-20,18;UBERON:0004291,1.16e-20,18;UBERON:0004535,2.72e-16,23;UBERON:0001009,2.72e-16,23;UBERON:0001374,1.33e-15,1;UBERON:0004252,1.33e-15,1;UBERON:0003663,1.33e-15,1;UBERON:0005090,1.33e-15,1;UBERON:0001630,1.33e-15,1;UBERON:0003661,1.33e-15,1;UBERON:0010890,1.33e-15,1;UBERON:0001383,1.33e-15,1;UBERON:0004872,1.68e-11,33;UBERON:0003103,6.37e-09,43;UBERON:0003914,3.41e-08,47|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0.473489471170421,0.196764231747404,0,0.232533944750408,0,0.467061369468678,0.822799249567402,2.13417703302824,3.4859588104718,2.33919979880532,1.09775057645525,3.75777972529041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0.412085900803307,0.441596760403192,0,0.177475806159338,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0,0,0,0.765153328275374,0.220591419119515,0|short_description=p24@Rbfox1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:268859 | |||
|HGNC= | |||
|MCL_coexpression_id=10 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9JJ43 | |||
|association_with_transcript=-97bp_to_ENSMUST00000056416,ENSMUST00000092375,ENSMUST00000096292,ENSMUST00000170095,NM_183188,uc007ycf.2,uc007ycg.2,uc007ych.2_5end | |||
|cluster_id=chr16:7069821..7069830,+ | |||
|description=CAGE_peak_24_at_Rbfox1_5end | |||
|id=chr16:7069821..7069830,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!5.86e-19!18;UBERON:0000948!5.86e-19!18;UBERON:0005498!5.86e-19!18;UBERON:0004140!5.86e-19!18;UBERON:0009881!5.86e-19!18;UBERON:0004141!5.86e-19!18;UBERON:0003084!5.86e-19!18;UBERON:0007005!5.86e-19!18;UBERON:0004139!5.86e-19!18;UBERON:0004291!5.86e-19!18;UBERON:0004535!2.39e-14!23;UBERON:0001009!2.39e-14!23;UBERON:0004872!2.51e-09!33;UBERON:0003103!4.71e-08!43;UBERON:0003914!4.59e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.16e-20,18;UBERON:0000948,1.16e-20,18;UBERON:0005498,1.16e-20,18;UBERON:0004140,1.16e-20,18;UBERON:0009881,1.16e-20,18;UBERON:0004141,1.16e-20,18;UBERON:0003084,1.16e-20,18;UBERON:0007005,1.16e-20,18;UBERON:0004139,1.16e-20,18;UBERON:0004291,1.16e-20,18;UBERON:0004535,2.72e-16,23;UBERON:0001009,2.72e-16,23;UBERON:0001374,1.33e-15,1;UBERON:0004252,1.33e-15,1;UBERON:0003663,1.33e-15,1;UBERON:0005090,1.33e-15,1;UBERON:0001630,1.33e-15,1;UBERON:0003661,1.33e-15,1;UBERON:0010890,1.33e-15,1;UBERON:0001383,1.33e-15,1;UBERON:0004872,1.68e-11,33;UBERON:0003103,6.37e-09,43;UBERON:0003914,3.41e-08,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0.473489471170421,0.196764231747404,0,0.232533944750408,0,0.467061369468678,0.822799249567402,2.13417703302824,3.4859588104718,2.33919979880532,1.09775057645525,3.75777972529041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0.412085900803307,0.441596760403192,0,0.177475806159338,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0,0,0,0.765153328275374,0.220591419119515,0 | |||
|short_description=p24@Rbfox1 | |||
}} |
Revision as of 01:11, 4 August 2015
Short description: | p24@Rbfox1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_24_at_Rbfox1_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | -97bp_to_ENSMUST00000056416, ENSMUST00000092375, ENSMUST00000096292, ENSMUST00000170095, NM_183188, uc007ycf.2, uc007ycg.2, uc007ych.2_5end |
EntrezGene: | 268859 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.16e-20 | 18 |
heart | 1.16e-20 | 18 |
primitive heart tube | 1.16e-20 | 18 |
primary heart field | 1.16e-20 | 18 |
anterior lateral plate mesoderm | 1.16e-20 | 18 |
heart tube | 1.16e-20 | 18 |
heart primordium | 1.16e-20 | 18 |
cardiac mesoderm | 1.16e-20 | 18 |
cardiogenic plate | 1.16e-20 | 18 |
heart rudiment | 1.16e-20 | 18 |
cardiovascular system | 2.72e-16 | 23 |
circulatory system | 2.72e-16 | 23 |
biceps femoris | 1.33e-15 | 1 |
hindlimb stylopod muscle | 1.33e-15 | 1 |
hindlimb muscle | 1.33e-15 | 1 |
muscle structure | 1.33e-15 | 1 |
muscle organ | 1.33e-15 | 1 |
limb muscle | 1.33e-15 | 1 |
pelvic complex muscle | 1.33e-15 | 1 |
muscle of leg | 1.33e-15 | 1 |
splanchnic layer of lateral plate mesoderm | 1.68e-11 | 33 |
compound organ | 6.37e-09 | 43 |
epithelial tube | 3.41e-08 | 47 |