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FFCP PHASE1:Mm9::chr5:141178195..141178275,-: Difference between revisions

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{{FFCP|EntrezGene=74239|HGNC=|MCL_coexpression_id=463|UniProt=|association_with_transcript=0bp_to_ENSMUST00000135028,ENSMUST00000136385,ENSMUST00000139382,ENSMUST00000149674_5end|description=CAGE_peak_1_at_Iqce_5end|id=chr5:141178195..141178275,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.20e-17!73;UBERON:0005743!2.20e-17!73;UBERON:0000033!5.75e-17!63;UBERON:0000955!1.34e-16!50;UBERON:0006238!1.34e-16!50;UBERON:0000073!3.92e-16!75;UBERON:0001016!3.92e-16!75;UBERON:0002616!5.16e-16!49;UBERON:0001049!6.28e-16!52;UBERON:0005068!6.28e-16!52;UBERON:0006241!6.28e-16!52;UBERON:0007135!6.28e-16!52;UBERON:0002346!8.45e-16!71;UBERON:0003075!8.45e-16!71;UBERON:0007284!8.45e-16!71;UBERON:0000153!1.22e-15!94;UBERON:0007811!3.19e-15!86;UBERON:0003056!7.13e-15!49;UBERON:0004121!1.46e-13!102;UBERON:0000924!1.46e-13!102;UBERON:0006601!1.46e-13!102;UBERON:0003080!2.01e-13!40;UBERON:0002780!7.14e-13!39;UBERON:0001890!7.14e-13!39;UBERON:0006240!7.14e-13!39;UBERON:0000475!5.69e-09!200;UBERON:0002791!6.71e-08!29;UBERON:0003528!6.71e-08!29;UBERON:0001893!6.71e-08!29;UBERON:0002020!7.20e-08!34;UBERON:0000479!1.59e-07!349|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.20e-17,73;UBERON:0002346,2.58e-17,64;UBERON:0003075,2.58e-17,64;UBERON:0007284,2.58e-17,64;UBERON:0000955,2.37e-16,47;UBERON:0006238,2.37e-16,47;UBERON:0001016,3.92e-16,75;UBERON:0001049,6.28e-16,52;UBERON:0005068,6.28e-16,52;UBERON:0006241,6.28e-16,52;UBERON:0007135,6.28e-16,52;UBERON:0000073,6.74e-16,54;UBERON:0002616,9.16e-16,46;UBERON:0003056,7.13e-15,49;UBERON:0004121,2.22e-14,95;UBERON:0000924,2.22e-14,95;UBERON:0006601,2.22e-14,95;UBERON:0010371,2.29e-14,73;UBERON:0003080,2.01e-13,40;UBERON:0002780,7.14e-13,39;UBERON:0001890,7.14e-13,39;UBERON:0006240,7.14e-13,39;UBERON:0003528,6.71e-08,29;UBERON:0002791,6.71e-08,29;UBERON:0001893,6.71e-08,29;UBERON:0002020,7.20e-08,34;UBERON:0010314,1.38e-07,92;UBERON:0000479,1.65e-07,349|phase1_expression=13.9329496981171,0.348975407639361,1.36499771816861,2.72217790176147,0,6.21153306073992,6.07392865548367,14.332688902015,0.563154888606667,0.70219357896598,0.856089841127525,2.39316476986009,17.2912737230518,16.7847172644475,4.66353666541928,5.26435695213547,2.79824751251259,9.93705820878449,10.6949258212476,8.91218268775863,28.8296753612127,12.2127869977089,13.5823890352246,4.7997726838022,3.89995777814189,0,1.29228598847722,3.01659725760245,2.47030445293286,3.52842181663903,2.21730510655305,13.9706748161119,9.22597181376855,0,3.46621943701529,4.3221007793208,4.28755648150975,1.25559489221072,3.906676722619,3.66466620781659,3.52938892818609,2.73218193983378,4.36959317728038,12.9673722514845,11.6583470902442,10.8292583775392,18.7773922643529,21.5844904816642,18.0142669842267,20.0262796046512,22.6778003033087,20.125359011096,4.86569557567435,13.7818806982155,15.7964085596958,9.00408026125814,9.16907007804022,6.18806510732931,15.578367486189,13.7537654610729,14.5781222806421,7.79342423759004,15.1180115338894,9.44894703145469,16.8107281636386,9.9467216092454,16.7776061890307,28.8163728991166,12.5464430893258,9.45041568321835,11.567872874326,13.4255962669788,14.1355866209033,11.0241719293459,12.0765293482978,8.27296907949019,14.3150645299205,16.2162919368188,15.2070467923681,19.6510568717989,18.8464545820964,19.2737947106001,16.4717969410815,16.3201156909187,14.8214300343506,14.4368006882097,13.2405663143166,16.4031512326265,5.45228591998925,8.46401473195998,16.232411367294,3.44169550792555,0.679971333707751,3.2382191498269,7.14754059192436,8.06448396775204,9.55022056895913,13.1231348385104,9.35229616570328,8.12681021373782,11.8308472612412,20.5322363862909,7.64415719119937,28.4426681261332,4.32982082022428,4.56047757855178,6.0662933401774,8.79215873836762,15.7952109024775,13.9535610720935,13.0113995074602,11.2652226975492,13.1450833435953,9.79697163592047,12.5819916635204,10.6816602630224,5.93267922562497,11.423349196673,7.96149496754887,8.57364304721269,7.06692859073259,5.81850303762267,5.59175283654366,17.5668478206928,20.3163305609051,4.85368404896324,3.71426885968353,2.39961092397363,5.08280908292259,22.9179678289379,26.992535566299,17.0889918873496,25.5521750682646,25.5715457330331,19.9476522777178,23.8494656709604,18.2292461292066,9.57933673697716,11.625246887949,10.7325346502102,20.9493913169953,10.1156925950728,14.945156773844,17.6324636867787,22.3840082207869,21.7793324484245,17.3348190435498,16.039608985819,10.7783996466421,15.1284864134255,15.4836989264275,9.86380795924087,12.5121262151519,16.0195996600197,17.9030458674911,15.723707078661,7.02213187313235,4.37491442095016,1.98914449576915,5.59239585845855,8.67746421930056,4.8616756594474,8.99629995223799,9.24791889212798,7.86762275725629,6.97601834251224,7.24338183778972,7.23945122676451,5.59503489705834,5.41752631461014,9.40398190731926,6.72519942156529,6.80605357402257,7.78397228810156,25.2347938276953,20.992540925374,1.9825126979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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:74239
|HGNC=
|MCL_coexpression_id=463
|TSSclassifier=NA
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000135028,ENSMUST00000136385,ENSMUST00000139382,ENSMUST00000149674_5end
|cluster_id=chr5:141178195..141178275,-
|description=CAGE_peak_1_at_Iqce_5end
|id=chr5:141178195..141178275,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.20e-17!73;UBERON:0005743!2.20e-17!73;UBERON:0000033!5.75e-17!63;UBERON:0000955!1.34e-16!50;UBERON:0006238!1.34e-16!50;UBERON:0000073!3.92e-16!75;UBERON:0001016!3.92e-16!75;UBERON:0002616!5.16e-16!49;UBERON:0001049!6.28e-16!52;UBERON:0005068!6.28e-16!52;UBERON:0006241!6.28e-16!52;UBERON:0007135!6.28e-16!52;UBERON:0002346!8.45e-16!71;UBERON:0003075!8.45e-16!71;UBERON:0007284!8.45e-16!71;UBERON:0000153!1.22e-15!94;UBERON:0007811!3.19e-15!86;UBERON:0003056!7.13e-15!49;UBERON:0004121!1.46e-13!102;UBERON:0000924!1.46e-13!102;UBERON:0006601!1.46e-13!102;UBERON:0003080!2.01e-13!40;UBERON:0002780!7.14e-13!39;UBERON:0001890!7.14e-13!39;UBERON:0006240!7.14e-13!39;UBERON:0000475!5.69e-09!200;UBERON:0002791!6.71e-08!29;UBERON:0003528!6.71e-08!29;UBERON:0001893!6.71e-08!29;UBERON:0002020!7.20e-08!34;UBERON:0000479!1.59e-07!349
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.20e-17,73;UBERON:0002346,2.58e-17,64;UBERON:0003075,2.58e-17,64;UBERON:0007284,2.58e-17,64;UBERON:0000955,2.37e-16,47;UBERON:0006238,2.37e-16,47;UBERON:0001016,3.92e-16,75;UBERON:0001049,6.28e-16,52;UBERON:0005068,6.28e-16,52;UBERON:0006241,6.28e-16,52;UBERON:0007135,6.28e-16,52;UBERON:0000073,6.74e-16,54;UBERON:0002616,9.16e-16,46;UBERON:0003056,7.13e-15,49;UBERON:0004121,2.22e-14,95;UBERON:0000924,2.22e-14,95;UBERON:0006601,2.22e-14,95;UBERON:0010371,2.29e-14,73;UBERON:0003080,2.01e-13,40;UBERON:0002780,7.14e-13,39;UBERON:0001890,7.14e-13,39;UBERON:0006240,7.14e-13,39;UBERON:0003528,6.71e-08,29;UBERON:0002791,6.71e-08,29;UBERON:0001893,6.71e-08,29;UBERON:0002020,7.20e-08,34;UBERON:0010314,1.38e-07,92;UBERON:0000479,1.65e-07,349
|phase1_expression=13.9329496981171,0.348975407639361,1.36499771816861,2.72217790176147,0,6.21153306073992,6.07392865548367,14.332688902015,0.563154888606667,0.70219357896598,0.856089841127525,2.39316476986009,17.2912737230518,16.7847172644475,4.66353666541928,5.26435695213547,2.79824751251259,9.93705820878449,10.6949258212476,8.91218268775863,28.8296753612127,12.2127869977089,13.5823890352246,4.7997726838022,3.89995777814189,0,1.29228598847722,3.01659725760245,2.47030445293286,3.52842181663903,2.21730510655305,13.9706748161119,9.22597181376855,0,3.46621943701529,4.3221007793208,4.28755648150975,1.25559489221072,3.906676722619,3.66466620781659,3.52938892818609,2.73218193983378,4.36959317728038,12.9673722514845,11.6583470902442,10.8292583775392,18.7773922643529,21.5844904816642,18.0142669842267,20.0262796046512,22.6778003033087,20.125359011096,4.86569557567435,13.7818806982155,15.7964085596958,9.00408026125814,9.16907007804022,6.18806510732931,15.578367486189,13.7537654610729,14.5781222806421,7.79342423759004,15.1180115338894,9.44894703145469,16.8107281636386,9.9467216092454,16.7776061890307,28.8163728991166,12.5464430893258,9.45041568321835,11.567872874326,13.4255962669788,14.1355866209033,11.0241719293459,12.0765293482978,8.27296907949019,14.3150645299205,16.2162919368188,15.2070467923681,19.6510568717989,18.8464545820964,19.2737947106001,16.4717969410815,16.3201156909187,14.8214300343506,14.4368006882097,13.2405663143166,16.4031512326265,5.45228591998925,8.46401473195998,16.232411367294,3.44169550792555,0.679971333707751,3.2382191498269,7.14754059192436,8.06448396775204,9.55022056895913,13.1231348385104,9.35229616570328,8.12681021373782,11.8308472612412,20.5322363862909,7.64415719119937,28.4426681261332,4.32982082022428,4.56047757855178,6.0662933401774,8.79215873836762,15.7952109024775,13.9535610720935,13.0113995074602,11.2652226975492,13.1450833435953,9.79697163592047,12.5819916635204,10.6816602630224,5.93267922562497,11.423349196673,7.96149496754887,8.57364304721269,7.06692859073259,5.81850303762267,5.59175283654366,17.5668478206928,20.3163305609051,4.85368404896324,3.71426885968353,2.39961092397363,5.08280908292259,22.9179678289379,26.992535566299,17.0889918873496,25.5521750682646,25.5715457330331,19.9476522777178,23.8494656709604,18.2292461292066,9.57933673697716,11.625246887949,10.7325346502102,20.9493913169953,10.1156925950728,14.945156773844,17.6324636867787,22.3840082207869,21.7793324484245,17.3348190435498,16.039608985819,10.7783996466421,15.1284864134255,15.4836989264275,9.86380795924087,12.5121262151519,16.0195996600197,17.9030458674911,15.723707078661,7.02213187313235,4.37491442095016,1.98914449576915,5.59239585845855,8.67746421930056,4.8616756594474,8.99629995223799,9.24791889212798,7.86762275725629,6.97601834251224,7.24338183778972,7.23945122676451,5.59503489705834,5.41752631461014,9.40398190731926,6.72519942156529,6.80605357402257,7.78397228810156,25.2347938276953,20.992540925374,1.98251269790279,4.49565963328025,11.7308537794379,13.4697269679054,13.5310834388198,18.1515172161008,11.5636582799333,9.3210556795154,5.21981967698963,7.90554982675252,7.79139147280835,9.35095418593409,9.74820435595601,8.08937467788799,5.83572734661674,6.96994456390285,16.6907752838712,17.708519454508,21.4144697778853,17.1067115390064,18.0375813065892,19.0769430101666,22.4489706791113,17.8608279055319,19.3108435244891,18.3861774243483,7.11486305009157,8.00856507437251,7.07612382407531,7.87017393346988,5.68008339887808,7.95884627182976,7.89340140522401,13.5217184601881,10.0523840600522,4.3929826110093,12.9391385874619,15.6299198020771,9.04909252032226,10.1031551178845,7.53469136792031,8.68398338454061,19.0295785871603,8.90609635321278,11.7334783038259,13.5796068620151,22.7649540839847,17.253144516507,17.853273066451,15.8058254764817,24.5910824805658,17.2742457926044,21.3669390001033,17.533374674584,15.7143333497965,18.0811323226889,16.5870412333199,16.3171705145613,5.4094070032094,4.96686143348518,16.8578119487182,18.6366581681603,5.73772308818364,7.82659874333556,13.2513452154828,11.7131623288992,15.9413314322271,12.4263774935327,10.6943363559549,14.7199796010193,12.9539424535966,11.1057226006299,11.8586333383957,23.4564560987919,22.5684735481147,19.4091507997308,18.5691133663077,22.9308470931824,17.2568679841952,13.595715624679,11.1859716076958,14.5225911412042,12.1073776081117,13.8345816574767,11.3708448994017,13.4507479906677,11.0514187299264,14.8537276229834,6.32511651449993,10.3135543248187,33.0226417581174,16.5656206508805,22.8964870295475,18.8616590827801,27.6650764481947,25.8634785523002,23.5305099461033,24.9661258273971,3.52007562095566,4.44847348814022,10.8058915046931,13.6855589941428,12.7556897089765,12.4847754601283,8.71418111222896,10.1767357841938,6.70405924248657,17.6154036909984,9.22702756308404,13.8279201535359,12.222838806401,6.40452753815949,7.65487675237741,5.71945433016307,5.77926661979108,8.95689294871411,5.8043988997858,7.63736494412091,16.6076396630096,12.4024874947378,11.7725821495763,13.5907392409405,11.3548533148012,12.4075198674035,12.4806718145257,11.7790173892813,9.85073797017626,11.8054469486516,130.776761774732,14.6526215123099,9.26567546559747,17.3061557626202,14.9825395234168,18.0783054275133,17.4862285582173,18.7494314175288,15.3094642861538,54.5980113066774,74.0237116082714,22.1207784439725,8.5144590421869,10.8873614594717,11.3031115990682,12.5318686967237,14.9011016085949,12.5003267500768,13.2920574457119,14.4382023425851,15.85101578424,14.8214492151156,19.3941182672107,18.3764617533029,19.1678119577773,8.38902419376282,4.21773311410723,3.13998498133165,2.01461539636894,15.4551675225752,15.2022805115457,14.8352815656485,7.93163002592544,12.5393026008841,17.5073071211291,23.476587061866,28.0718801585304,24.5750050751473,16.4419804744954,19.6402413321322,20.925697507186,19.8141329418657,20.8445508132734,25.3702552758392,10.586309453586,23.1434426572598,13.4879548545766,13.3708694387562,10.0614318061432,6.98605332110054,11.3345831178824,12.1560683770948,14.1204452220399,14.6564382823003,16.9831130926461,13.5810965797975,14.8889996877113,15.0459108151443,13.1527223908354,16.6702791949076,15.7602683285003,14.6611007552416,11.5384052224926,14.2782952530365,15.0862471049583,14.0205886865877,11.6833733074187,13.8079095800712,14.9633914860376,13.7921810863433,13.3537420197124,13.9426947062057,17.5187306861162,8.41713407486608,11.1516917036724,15.2681947682123,13.0953933814301,12.7048209772492,17.747408210265,13.2399606307111,14.2698281151699,13.7517474590911,12.242453252406,7.94129108830256,8.81097775357602
|short_description=p1@Iqce
}}

Revision as of 23:43, 3 August 2015

Short description:p1@Iqce
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Iqce_5end
Coexpression cluster:MCL_coexpression_mm9:463
Association with transcript: 0bp_to_ENSMUST00000135028, ENSMUST00000136385, ENSMUST00000139382, ENSMUST00000149674_5end
EntrezGene:74239
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Iqce

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.21
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.07
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E914.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.39
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E417.29
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E816.78
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.26
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.91
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A328.83
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H212.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I913.58
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.90
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I23.02
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I313.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.47
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D812.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.66
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B310.83
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B718.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C221.58
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B818.01
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C320.03
Mouse Astrocytes, donor2.CNhs12078.11552-120C422.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C420.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.87
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I913.78
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A115.80
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E19.17
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.19
Mouse Granule cells, donor1.CNhs12131.11713-123C315.58
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C714.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.79
Mouse Meningeal cells, donor3.CNhs12109.11639-122D115.12
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E716.81
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.95
Mouse Microglia, donor1.CNhs12629.11718-123C816.78
Mouse Microglia, donor2.CNhs12634.11736-123E828.82
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.55
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.45
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.57
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.14
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.02
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.08
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.22
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.21
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D419.65
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F418.85
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D819.27
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E416.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.44
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.24
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.40
Mouse Schwann, donor1.CNhs12507.11728-123D95.45
Mouse Schwann, donor2.CNhs12573.11746-123F98.46
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G316.23
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.06
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.55
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I713.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.13
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H120.53
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.79
accessory axillary lymph node, adult.CNhs10475.1063-29H915.80
adrenal gland, adult.CNhs10508.49-24D713.95
adrenal gland, embryo E14.CNhs11038.406-44C513.01
adrenal gland, embryo E16.CNhs11004.1254-43D611.27
adrenal gland, embryo E17.CNhs11043.1263-45I113.15
adrenal gland, embryo E18.CNhs11026.1262-18F59.80
adrenal gland, neonate N00.CNhs11191.1311-23C112.58
adrenal gland, neonate N25.CNhs11223.1377-27I310.68
amnion, adult pregnant day17.5.CNhs10488.583-22A85.93
aorta, adult.CNhs10498.46-23H111.42
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F58.57
bone (os femoris), neonate N16.CNhs11225.1525-43A67.07
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B217.57
cerebellum, neonate N30.CNhs11135.1395-42I220.32
colon, adult.CNhs10468.36-18H74.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.71
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.08
corpora quadrigemina, adult.CNhs10501.16-22A422.92
corpus striatum, adult.CNhs10487.19-21D826.99
corpus striatum, neonate N00.CNhs11226.630-43F117.09
cortex, adult.CNhs10473.12-14D525.55
cortex, neonate N30.CNhs11107.1392-42F225.57
diencephalon, adult.CNhs10482.20-12F219.95
diencephalon, neonate N30.CNhs11201.1388-42B223.85
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B118.23
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.58
epididymis, adult.CNhs10490.58-23B211.63
eyeball, adult.CNhs10484.31-12G410.73
eyeball, embryo E12.CNhs11016.345-16C620.95
eyeball, embryo E14.CNhs10521.399-16E210.12
eyeball, embryo E15.CNhs10593.426-16C914.95
eyeball, embryo E17.CNhs11023.1261-18D417.63
eyeball, neonate N00.CNhs11207.633-15C622.38
eyeball, neonate N01.CNhs11140.1532-43E721.78
eyeball, neonate N02.CNhs11205.1551-44G817.33
eyeball, neonate N16.CNhs11188.777-19A216.04
forelimb, embryo E11.CNhs10596.335-25E210.78
forelimb, embryo E12.CNhs10600.359-14H215.13
forelimb, embryo E13.CNhs10589.384-1E215.48
forelimb, embryo E14.CNhs10577.413-26A89.86
forelimb, embryo E15.CNhs11007.437-20E712.51
forelimb, embryo E17.CNhs10598.1517-43C416.02
forelimb, embryo E18.CNhs11008.1520-43B517.90
gonad, embryo E13.CNhs11044.1564-45I615.72
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.02
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.37
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E95.59
heart, embryo E12.CNhs11015.353-12F58.68
heart, embryo E13.CNhs11013.376-3I94.86
heart, embryo E14.CNhs10597.403-26D49.00
heart, embryo E15.CNhs11017.431-16C89.25
heart, embryo E16.CNhs11021.457-17C67.87
heart, embryo E17.CNhs11025.479-18E56.98
heart, embryo E18.CNhs11030.1283-20G37.24
heart, neonate N00.CNhs11213.639-21E37.24
heart, neonate N03.CNhs11221.1349-25I25.60
heart, neonate N10.CNhs11118.749-24G15.42
heart, neonate N16.CNhs11209.782-15G19.40
heart, neonate N20.CNhs11127.821-26I66.73
heart, neonate N25.CNhs11196.1351-25D36.81
heart, neonate N30.CNhs11202.1390-42D27.78
hippocampus, adult.CNhs10478.13-16E825.23
hippocampus, neonate N00.CNhs11228.627-43G120.99
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A34.50
intestine, embryo E12.CNhs11019.1251-16I511.73
intestine, embryo E13.CNhs11010.381-16D513.47
intestine, embryo E15.CNhs10602.976-16D813.53
intestine, embryo E16.CNhs10585.463-22H418.15
intestine, embryo E17.CNhs10582.482-18D311.56
intestine, embryo E18.CNhs10526.1289-20F79.32
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E97.91
intestine, neonate N06.CNhs11102.688-20B87.79
intestine, neonate N07.CNhs11095.720-20F29.35
intestine, neonate N10.CNhs11098.755-23A59.75
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E35.84
intestine, neonate N30.CNhs11131.1384-42G16.97
kidney, embryo E14.CNhs10606.411-4I916.69
kidney, embryo E15.CNhs10997.434-16F817.71
kidney, embryo E16.CNhs10584.464-22A521.41
kidney, embryo E17.CNhs11028.483-18I217.11
kidney, embryo E18.CNhs11001.1288-20C718.04
kidney, neonate N00.CNhs11214.646-21G719.08
kidney, neonate N10.CNhs11206.758-6D522.45
kidney, neonate N20.CNhs11113.832-19I117.86
kidney, neonate N25.CNhs11122.1353-25F319.31
kidney, neonate N30.CNhs11203.1385-42H118.39
liver, adult pregnant day01.CNhs10466.508-5B27.11
liver, embryo E12.CNhs10601.355-15F88.01
liver, embryo E13.CNhs10524.378-3H67.08
liver, embryo E14.CNhs10594.409-16E17.87
liver, embryo E15.CNhs10520.433-16D75.68
liver, embryo E16.CNhs10523.462-17F57.96
liver, embryo E17.CNhs10510.481-18A37.89
liver, embryo E18.CNhs10579.499-43G413.52
liver, neonate N00.CNhs11117.641-24F410.05
liver, neonate N03.CNhs11123.1345-25G24.39
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H215.63
liver, neonate N10.CNhs11115.751-24B99.05
liver, neonate N20.CNhs11220.823-25A310.10
liver, neonate N25.CNhs11198.1368-26H17.53
liver, neonate N30.CNhs11106.1382-42D18.68
lung, adult.CNhs10474.28-22B119.03
lung, embryo E12.CNhs10522.354-16G28.91
lung, embryo E14.CNhs10604.404-26F811.73
lung, embryo E15.CNhs11020.432-17C513.58
lung, embryo E16.CNhs10998.458-17B622.76
lung, embryo E17.CNhs10605.480-44A617.25
lung, embryo E18.CNhs10583.1287-20I617.85
lung, neonate N00.CNhs11224.640-42C615.81
lung, neonate N06.CNhs11212.683-20E524.59
lung, neonate N07.CNhs11111.715-19A317.27
lung, neonate N10.CNhs11219.750-23E621.37
lung, neonate N20.CNhs11109.822-18A417.53
lung, neonate N25.CNhs11119.1359-25C715.71
lung, neonate N30.CNhs11133.1394-42H218.08
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A116.59
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A116.32
mammary gland, adult lactating day02.CNhs10480.595-22B65.41
mammary gland, adult pregnant day19.CNhs10476.588-5H24.97
medulla oblongata, adult.CNhs10477.17-12C216.86
medulla oblongata, neonate N30.CNhs11200.1396-42A318.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.74
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.83
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E113.25
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E211.71
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D712.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.69
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D914.72
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.95
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.11
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.86
olfactory brain, adult.CNhs10489.18-22I923.46
ovary, adult.CNhs10507.91-2I722.57
ovary, embryo E18.CNhs11040.505-44H719.41
ovary, neonate N00.CNhs11217.1299-22I418.57
oviduct, adult pregnant day01.CNhs10500.988-6G622.93
pancreas, adult.CNhs10486.34-16E417.26
pancreas, embryo E14.CNhs11012.405-44F413.60
pancreas, embryo E15.CNhs11042.1556-45F211.19
pancreas, embryo E16.CNhs11003.460-26E514.52
pancreas, embryo E17.CNhs10599.1558-45G312.11
pancreas, embryo E18.CNhs10580.1535-43I713.83
pancreas, neonate N00.CNhs11105.645-26G911.37
pancreas, neonate N01.CNhs11138.1531-43D713.45
pancreas, neonate N02.CNhs11139.1539-43D811.05
pancreas, neonate N16.CNhs11136.787-43B614.85
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H510.31
pituitary gland, adult.CNhs10493.21-1G833.02
pituitary gland, embryo E12.CNhs11018.346-16E616.57
pituitary gland, embryo E13.CNhs11009.370-44C722.90
pituitary gland, embryo E14.CNhs11037.398-44A518.86
pituitary gland, embryo E15.CNhs10592.427-16B927.67
pituitary gland, embryo E16.CNhs11036.449-43F625.86
pituitary gland, embryo E17.CNhs11039.1265-44F523.53
pituitary gland, neonate N00.CNhs11190.1308-22E924.97
placenta, adult pregnant day10.CNhs10472.539-13I73.52
placenta, adult pregnant day17.CNhs10464.577-18G34.45
prostate, adult.CNhs10470.859-1F810.81
skin, adult.CNhs10492.30-1C313.69
skin, neonate N00.CNhs11124.650-25G412.76
skin, neonate N03.CNhs11215.662-22H312.48
skin, neonate N06.CNhs11097.693-20I58.71
skin, neonate N10.CNhs11108.762-6C410.18
small intestine, neonate N16.CNhs11114.790-21I16.70
spinal cord, adult.CNhs10505.24-13C917.62
spleen, adult.CNhs10465.25-2G29.23
spleen, embryo E16.CNhs11035.461-43C113.83
spleen, embryo E18.CNhs11011.1271-21F212.22
spleen, neonate N10.CNhs11116.752-24D16.40
spleen, neonate N20.CNhs11112.824-19H17.65
spleen, neonate N25.CNhs11099.1354-25G35.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.80
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E316.61
stomach, embryo E15.CNhs10603.1252-16G812.40
stomach, embryo E16.CNhs11022.459-17D411.77
stomach, embryo E17.CNhs11006.1035-18D513.59
stomach, embryo E18.CNhs10999.1286-20C611.35
stomach, neonate N03.CNhs11193.1340-24B812.41
stomach, neonate N07.CNhs11210.718-18A912.48
stomach, neonate N25.CNhs11104.1355-25E411.78
stomach, neonate N30.CNhs11134.1386-42I19.85
submandibular gland, adult.CNhs10469.59-29C111.81
testis, adult.CNhs10504.57-7G5130.78
testis, embryo E13.CNhs11031.389-23F514.65
testis, embryo E15.CNhs11034.443-27C59.27
testis, embryo E16.CNhs11033.470-26G517.31
testis, embryo E17.CNhs11029.486-18I514.98
testis, embryo E18.CNhs11027.503-18G518.08
testis, neonate N00.CNhs11189.1300-22B717.49
testis, neonate N07.CNhs11222.726-26I418.75
testis, neonate N10.CNhs11204.763-44D915.31
testis, neonate N20.CNhs11110.839-18H354.60
testis, neonate N30.CNhs11130.1391-42E274.02
thymus, adult.CNhs10471.38-12B522.12
thymus, embryo E14.CNhs11041.402-44I48.51
thymus, embryo E15.CNhs11005.430-45I210.89
thymus, embryo E16.CNhs11002.456-26C511.30
thymus, embryo E17.CNhs10581.478-18C112.53
thymus, embryo E18.CNhs10595.1273-19G414.90
thymus, neonate N02.CNhs11181.1541-43F812.50
thymus, neonate N03.CNhs11137.2104-43C713.29
thymus, neonate N06.CNhs11197.681-26C414.44
thymus, neonate N07.CNhs11211.713-19D315.85
thymus, neonate N10.CNhs11194.748-24E414.82
thymus, neonate N20.CNhs11186.820-7A219.39
thymus, neonate N25.CNhs11125.1362-25G718.38
thymus, neonate N30.CNhs11132.1393-42G219.17
tongue, adult.CNhs10499.32-1B48.39
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.14
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E415.46
uterus, adult pregnant day19.CNhs10497.590-15F515.20
uterus, adult.CNhs10509.92-27E514.84
vagina, adult.CNhs10502.89-27D57.93
vesicular gland, adult.CNhs10491.51-27F812.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A117.51
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A223.48
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A328.07
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D724.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A416.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A519.64
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A719.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A820.84
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A925.37
whole body, embryo E11.CNhs11014.324-5I810.59
whole body, embryo E12.CNhs10587.857-27C923.14
whole body, embryo E13.CNhs10512.372-23H213.49
whole body, embryo E14.5.CNhs10578.420-27D213.37
whole body, embryo E14.CNhs10519.395-14B110.06
whole body, embryo E16.CNhs10514.453-14F26.99
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.16
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.12
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.66
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.98
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.89
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G515.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G513.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G516.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G515.76
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.66
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.28
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G513.81
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G514.96
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.79
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.35
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G517.52
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.15
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.70
whole body, embryo E17.5.CNhs10513.490-9F917.75
whole body, embryo E17.CNhs10517.475-3I513.24
whole body, embryo E18.CNhs10516.493-3B314.27
whole body, neonate N00.CNhs10525.657-19C213.75
whole body, neonate N01.CNhs10576.659-23C612.24
whole body, neonate N06.CNhs10515.692-21D17.94
whole body, neonate N10.CNhs10518.761-6B48.81





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system2.20e-1773
neurectoderm2.58e-1764
neural plate2.58e-1764
presumptive neural plate2.58e-1764
brain2.37e-1647
future brain2.37e-1647
nervous system3.92e-1675
neural tube6.28e-1652
neural rod6.28e-1652
future spinal cord6.28e-1652
neural keel6.28e-1652
regional part of nervous system6.74e-1654
regional part of brain9.16e-1646
pre-chordal neural plate7.13e-1549
ectoderm-derived structure2.22e-1495
ectoderm2.22e-1495
presumptive ectoderm2.22e-1495
ecto-epithelium2.29e-1473
anterior neural tube2.01e-1340
regional part of forebrain7.14e-1339
forebrain7.14e-1339
future forebrain7.14e-1339
brain grey matter6.71e-0829
regional part of telencephalon6.71e-0829
telencephalon6.71e-0829
gray matter7.20e-0834
structure with developmental contribution from neural crest1.38e-0792
tissue1.65e-07349
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