Personal tools

FFCP PHASE1:Mm9::chr16:55895437..55895451,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=385658|HGNC=|MCL_coexpression_id=40|UniProt=B9EKK6|association_with_transcript=-39bp_to_NM_001134494,uc007zlq.2_5end|description=CAGE_peak_3_at_Fam55c_5end|id=chr16:55895437..55895451,-|ontology_enrichment_celltype=CL:0000542!5.52e-08!13;CL:0000051!5.52e-08!13;CL:0000838!1.04e-07!12;CL:0000084!4.38e-07!11;CL:0000827!4.38e-07!11|ontology_enrichment_celltype_v019_2=CL:0000084,1.22e-17,11;CL:0000827,1.22e-17,11;CL:0000838,3.86e-16,12;CL:0000542,7.21e-15,13;CL:0000051,7.21e-15,13;CL:0002031,5.30e-13,25;CL:0000988,1.60e-12,32;CL:0002032,1.60e-12,32;CL:0000037,1.60e-12,32;CL:0000837,1.60e-12,32;CL:0000624,2.22e-11,8;CL:0000738,2.85e-11,17;CL:0002087,2.85e-11,17;CL:0002320,2.69e-10,46;CL:0000134,2.69e-10,46;CL:0000791,3.92e-10,9;CL:0000789,3.92e-10,9;CL:0002420,3.92e-10,9;CL:0002419,3.92e-10,9;CL:0000790,3.92e-10,9;CL:0000219,1.45e-08,54;CL:0000815,5.73e-07,1;CL:0000792,5.73e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!4.98e-10!29;UBERON:0002370!7.87e-09!23;UBERON:0000974!7.87e-09!23;UBERON:0004807!7.87e-09!23;UBERON:0005058!7.87e-09!23;UBERON:0003351!7.87e-09!23;UBERON:0009113!7.87e-09!23;UBERON:0003295!7.87e-09!23;UBERON:0009722!7.87e-09!23;UBERON:0005562!7.87e-09!23;UBERON:0007690!7.87e-09!23;UBERON:0006562!4.34e-08!24;UBERON:0003408!4.34e-08!24;UBERON:0001557!4.34e-08!24;UBERON:0001042!4.34e-08!24;UBERON:0008814!4.34e-08!24;UBERON:0009145!4.34e-08!24;UBERON:0000065!5.33e-08!41;UBERON:0001004!1.59e-07!42;UBERON:0002193!1.67e-07!48;UBERON:0000072!6.89e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.69e-10,46;UBERON:0000029,8.36e-07,1;UBERON:0001097,8.36e-07,1;UBERON:0003968,8.36e-07,1;UBERON:0001467,8.36e-07,1|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,6.06879620175408,0.563154888606667,0.936258105287974,0.171217968225505,0.239316476986009,5.13602189793617,5.33264454755884,0.333109761815663,0.202475267389826,0,1.89277299214943,1.23402990245165,0.42438965179803,0.595303031057488,2.78014663362479,2.35079810225042,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0,0,0,0.635030673459631,0,0,0,0,0.204169356262369,0,0,0.523523743973798,0.588231488031014,0.683045484958446,0,0,0,0,0,0,0.439372365468944,0,0,0,0.838913030288682,2.90144856804538,0.336093799142464,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0.384218305321555,0,0.540023753326763,0,0.285650984403804,0.220868540951614,0.122490799214954,0.0958454710182364,0,1.10115880999389,0.383062014255563,0.46081959976873,0,0.0914876436024097,0,0.558365998002762,0,0,0,0,0,0,0.151143120213571,1.15945795480671,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0.216491041011214,0,0,0.22836775943812,4.14300613835475,0,0,0.304465478312141,0,0,0.470354828542819,0,0.988779870937496,0.289198713839823,0.884610551949874,0.161766849947409,0,0.484875253135222,0,0.292780797011547,0,0,0.359445373517761,1.19980546198682,0.127070227073065,0.299581278809645,0.457500602818626,0,0.521472960576829,0,0.83115217823824,0.324482526135515,0.203678727700633,0.373220911830279,0.505445516867349,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0.408218994907967,0.12811372028485,0.281105173679186,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.308534225774757,0,0,0,0,0,0,0,0.219550115291051,0,0.210289948564127,0.205809224758569,0.330418782983798,0,0.426576501070468,0,0.38660238396628,0.201683524623343,0,0.570676878337677,0,0.494096864172033,0.502670417600539,0.198956472041151,0,0,0.216138049874694,0,0,0.114248512609729,0,0.814605311381257,0.193952487167626,0.911765658574141,0.189709611372772,0.738050739898011,0.156998727841375,0.123397163921801,0,0.333690211432188,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0.554259570499814,0.189491411770485,0.325929952884052,0,0,0.167506257441816,0.238043640886014,0.585400943573396,0,0.44292937929755,0.318909537314974,0.81931657357869,0.172684981865896,0.723245292907558,0,0,0,0.275936746304732,0.80275294993896,0.937693492737625,0,0,0,0,0.646270193198397,0,0.445597348164788,0.566153061577665,0,0,0.395287777946524,0,0,0.35613120733451,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,1.10264199027481,0.49465875882444,0.161464426695906,0.180938774784468,0.238744688006273,0.328281799490123,0.582961673259701,0,1.19609616558497,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0.686334519619568,1.01987057996313,0.419854356970974,0,0,0.158167996790568,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0.299033092087958,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,1.26404448251271,0.608175645870493,0.513554785824136,0.649604114888975,0.537080087002444,0.79472541912506,0.721172697119813,0.738447635872886,0.706765149637033,0.762068066549998,0.907435666231565,0.487289403698762,0.769694733122636,1.5193997283604,0,0.665957860122194,0.448569283047378,0,0,0.187682475451182,0,0,0.501572104035363,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0,0.51776031175182,0.103787347584177,0.798049746802062,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0.280924522409647,0.256100609619477,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p3@Fam55c}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:385658
|HGNC=
|MCL_coexpression_id=40
|TSSclassifier=NA
|UniProt=uniprot:B9EKK6
|association_with_transcript=-39bp_to_NM_001134494,uc007zlq.2_5end
|cluster_id=chr16:55895437..55895451,-
|description=CAGE_peak_3_at_Fam55c_5end
|id=chr16:55895437..55895451,-
|ontology_enrichment_celltype=CL:0000542!5.52e-08!13;CL:0000051!5.52e-08!13;CL:0000838!1.04e-07!12;CL:0000084!4.38e-07!11;CL:0000827!4.38e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000084,1.22e-17,11;CL:0000827,1.22e-17,11;CL:0000838,3.86e-16,12;CL:0000542,7.21e-15,13;CL:0000051,7.21e-15,13;CL:0002031,5.30e-13,25;CL:0000988,1.60e-12,32;CL:0002032,1.60e-12,32;CL:0000037,1.60e-12,32;CL:0000837,1.60e-12,32;CL:0000624,2.22e-11,8;CL:0000738,2.85e-11,17;CL:0002087,2.85e-11,17;CL:0002320,2.69e-10,46;CL:0000134,2.69e-10,46;CL:0000791,3.92e-10,9;CL:0000789,3.92e-10,9;CL:0002420,3.92e-10,9;CL:0002419,3.92e-10,9;CL:0000790,3.92e-10,9;CL:0000219,1.45e-08,54;CL:0000815,5.73e-07,1;CL:0000792,5.73e-07,1
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!4.98e-10!29;UBERON:0002370!7.87e-09!23;UBERON:0000974!7.87e-09!23;UBERON:0004807!7.87e-09!23;UBERON:0005058!7.87e-09!23;UBERON:0003351!7.87e-09!23;UBERON:0009113!7.87e-09!23;UBERON:0003295!7.87e-09!23;UBERON:0009722!7.87e-09!23;UBERON:0005562!7.87e-09!23;UBERON:0007690!7.87e-09!23;UBERON:0006562!4.34e-08!24;UBERON:0003408!4.34e-08!24;UBERON:0001557!4.34e-08!24;UBERON:0001042!4.34e-08!24;UBERON:0008814!4.34e-08!24;UBERON:0009145!4.34e-08!24;UBERON:0000065!5.33e-08!41;UBERON:0001004!1.59e-07!42;UBERON:0002193!1.67e-07!48;UBERON:0000072!6.89e-07!27
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.69e-10,46;UBERON:0000029,8.36e-07,1;UBERON:0001097,8.36e-07,1;UBERON:0003968,8.36e-07,1;UBERON:0001467,8.36e-07,1
|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,6.06879620175408,0.563154888606667,0.936258105287974,0.171217968225505,0.239316476986009,5.13602189793617,5.33264454755884,0.333109761815663,0.202475267389826,0,1.89277299214943,1.23402990245165,0.42438965179803,0.595303031057488,2.78014663362479,2.35079810225042,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0,0,0,0.635030673459631,0,0,0,0,0.204169356262369,0,0,0.523523743973798,0.588231488031014,0.683045484958446,0,0,0,0,0,0,0.439372365468944,0,0,0,0.838913030288682,2.90144856804538,0.336093799142464,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0.384218305321555,0,0.540023753326763,0,0.285650984403804,0.220868540951614,0.122490799214954,0.0958454710182364,0,1.10115880999389,0.383062014255563,0.46081959976873,0,0.0914876436024097,0,0.558365998002762,0,0,0,0,0,0,0.151143120213571,1.15945795480671,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0.216491041011214,0,0,0.22836775943812,4.14300613835475,0,0,0.304465478312141,0,0,0.470354828542819,0,0.988779870937496,0.289198713839823,0.884610551949874,0.161766849947409,0,0.484875253135222,0,0.292780797011547,0,0,0.359445373517761,1.19980546198682,0.127070227073065,0.299581278809645,0.457500602818626,0,0.521472960576829,0,0.83115217823824,0.324482526135515,0.203678727700633,0.373220911830279,0.505445516867349,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0.408218994907967,0.12811372028485,0.281105173679186,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.308534225774757,0,0,0,0,0,0,0,0.219550115291051,0,0.210289948564127,0.205809224758569,0.330418782983798,0,0.426576501070468,0,0.38660238396628,0.201683524623343,0,0.570676878337677,0,0.494096864172033,0.502670417600539,0.198956472041151,0,0,0.216138049874694,0,0,0.114248512609729,0,0.814605311381257,0.193952487167626,0.911765658574141,0.189709611372772,0.738050739898011,0.156998727841375,0.123397163921801,0,0.333690211432188,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0.554259570499814,0.189491411770485,0.325929952884052,0,0,0.167506257441816,0.238043640886014,0.585400943573396,0,0.44292937929755,0.318909537314974,0.81931657357869,0.172684981865896,0.723245292907558,0,0,0,0.275936746304732,0.80275294993896,0.937693492737625,0,0,0,0,0.646270193198397,0,0.445597348164788,0.566153061577665,0,0,0.395287777946524,0,0,0.35613120733451,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,1.10264199027481,0.49465875882444,0.161464426695906,0.180938774784468,0.238744688006273,0.328281799490123,0.582961673259701,0,1.19609616558497,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0.686334519619568,1.01987057996313,0.419854356970974,0,0,0.158167996790568,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0.299033092087958,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,1.26404448251271,0.608175645870493,0.513554785824136,0.649604114888975,0.537080087002444,0.79472541912506,0.721172697119813,0.738447635872886,0.706765149637033,0.762068066549998,0.907435666231565,0.487289403698762,0.769694733122636,1.5193997283604,0,0.665957860122194,0.448569283047378,0,0,0.187682475451182,0,0,0.501572104035363,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0,0.51776031175182,0.103787347584177,0.798049746802062,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0.280924522409647,0.256100609619477,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421
|short_description=p3@Fam55c
}}

Revision as of 23:24, 3 August 2015

Short description:p3@Fam55c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Fam55c_5end
Coexpression cluster:MCL_coexpression_mm9:40
Association with transcript: -39bp_to_NM_001134494, uc007zlq.2_5end
EntrezGene:385658
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Fam55c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.14
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.33
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H94.14
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
T cell1.22e-1711
pro-T cell1.22e-1711
lymphoid lineage restricted progenitor cell3.86e-1612
lymphocyte7.21e-1513
common lymphoid progenitor7.21e-1513
hematopoietic lineage restricted progenitor cell5.30e-1325
hematopoietic cell1.60e-1232
hematopoietic oligopotent progenitor cell1.60e-1232
hematopoietic stem cell1.60e-1232
hematopoietic multipotent progenitor cell1.60e-1232
CD4-positive, alpha-beta T cell2.22e-118
leukocyte2.85e-1117
nongranular leukocyte2.85e-1117
connective tissue cell2.69e-1046
mesenchymal cell2.69e-1046
mature alpha-beta T cell3.92e-109
alpha-beta T cell3.92e-109
immature T cell3.92e-109
mature T cell3.92e-109
immature alpha-beta T cell3.92e-109
motile cell1.45e-0854
regulatory T cell5.73e-071
CD4-positive, CD25-positive, alpha-beta regulatory T cell5.73e-071

Uber anatomy
Ontology termp-valuen
connective tissue2.69e-1046
lymph node8.36e-071
axillary lymph node8.36e-071
peripheral lymph node8.36e-071
shoulder8.36e-071
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr16:55895437..55895451,-&oldid=3712391"