FFCP PHASE1:Mm9::chr2:126325711..126325732,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:126325711..126325732,+|id=chr2:126325711..126325732,+|ontology_enrichment_celltype=CL:0000084!4.79e-25!11;CL:0000827!4.79e-25!11;CL:0000838!8.34e-23!12;CL:0000542!6.58e-21!13;CL:0000051!6.58e-21!13;CL:0000791!5.00e-20!9;CL:0000789!5.00e-20!9;CL:0002420!5.00e-20!9;CL:0002419!5.00e-20!9;CL:0000790!5.00e-20!9;CL:0000988!1.25e-17!32;CL:0002032!1.25e-17!32;CL:0000037!1.25e-17!32;CL:0000566!1.25e-17!32;CL:0000837!1.25e-17!32;CL:0000893!2.02e-17!6;CL:0002489!2.02e-17!6;CL:0000898!2.02e-17!6;CL:0000809!2.02e-17!6;CL:0000810!2.02e-17!6;CL:0000895!2.02e-17!6;CL:0000808!2.02e-17!6;CL:0000894!2.02e-17!6;CL:0000806!2.02e-17!6;CL:0000807!2.02e-17!6;CL:0000805!2.02e-17!6;CL:0002425!2.02e-17!6;CL:0002436!2.02e-17!6;CL:0002427!2.02e-17!6;CL:0002428!2.02e-17!6;CL:0002429!2.02e-17!6;CL:0002433!2.02e-17!6;CL:0002431!2.02e-17!6;CL:0002432!2.02e-17!6;CL:0000624!2.44e-17!8;CL:0000738!1.50e-15!17;CL:0002087!1.50e-15!17;CL:0002031!1.94e-14!25;CL:0002320!2.69e-11!46;CL:0000134!2.69e-11!46;CL:0000034!3.58e-09!97;CL:0000219!3.69e-09!54;CL:0000063!6.16e-07!66;CL:0000723!7.17e-07!91;CL:0000048!7.17e-07!91|ontology_enrichment_celltype_v019_2=CL:0000084,1.12e-10,11;CL:0000827,1.12e-10,11;CL:0000838,8.23e-10,12;CL:0000542,4.45e-09,13;CL:0000051,4.45e-09,13;CL:0000625,2.89e-08,1;CL:0000355,4.59e-08,9;CL:0000988,7.54e-08,32;CL:0002032,7.54e-08,32;CL:0000037,7.54e-08,32;CL:0000837,7.54e-08,32;CL:0000791,9.33e-08,9;CL:0000789,9.33e-08,9;CL:0002420,9.33e-08,9;CL:0002419,9.33e-08,9;CL:0000790,9.33e-08,9;CL:0000738,5.34e-07,17;CL:0002087,5.34e-07,17|ontology_enrichment_disease=DOID:0060100!2.04e-10!3;DOID:4045!2.04e-10!3|ontology_enrichment_disease_v019_2=DOID:0060100,5.59e-23,3;DOID:4045,5.59e-23,3;DOID:0050686,8.07e-12,6|ontology_enrichment_uberon=UBERON:0002384!2.69e-11!46;UBERON:0002370!7.94e-07!23;UBERON:0000974!7.94e-07!23;UBERON:0004807!7.94e-07!23;UBERON:0005058!7.94e-07!23;UBERON:0003351!7.94e-07!23;UBERON:0009113!7.94e-07!23;UBERON:0003295!7.94e-07!23;UBERON:0009722!7.94e-07!23;UBERON:0005562!7.94e-07!23;UBERON:0007690!7.94e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.59e-08,9;UBERON:0002036,4.59e-08,9;UBERON:0002385,4.59e-08,9;UBERON:0000486,4.59e-08,9;UBERON:0007503,4.59e-08,9;UBERON:0001015,4.59e-08,9;UBERON:0002329,4.59e-08,9;UBERON:0003082,4.59e-08,9;UBERON:0003059,4.59e-08,9;UBERON:0007282,4.59e-08,9;UBERON:0004290,4.59e-08,9;UBERON:0009618,4.59e-08,9;UBERON:0000383,2.61e-07,10|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,1.12630977721333,0.468129052643987,0.171217968225505,0.159544317990673,0.684802919724823,1.83582845079895,0,0,0,0.315462165358238,0.137114433605739,0,0.0850432901510698,0.0992909512008853,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8818223991596,1.5626706890476,5.75876118371178,82.940639812373,15.7100461540443,5.34061388334269,0,0,0,0,0,0,0,0,0,0,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0,1.65191295194984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0.339956859987711,0.839708713941948,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:126325711..126325732,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:126325711..126325732,+ | |||
|description=CAGE_peak_at_chr2:126325711..126325732,+ | |||
|id=chr2:126325711..126325732,+ | |||
|ontology_enrichment_celltype=CL:0000084!4.79e-25!11;CL:0000827!4.79e-25!11;CL:0000838!8.34e-23!12;CL:0000542!6.58e-21!13;CL:0000051!6.58e-21!13;CL:0000791!5.00e-20!9;CL:0000789!5.00e-20!9;CL:0002420!5.00e-20!9;CL:0002419!5.00e-20!9;CL:0000790!5.00e-20!9;CL:0000988!1.25e-17!32;CL:0002032!1.25e-17!32;CL:0000037!1.25e-17!32;CL:0000566!1.25e-17!32;CL:0000837!1.25e-17!32;CL:0000893!2.02e-17!6;CL:0002489!2.02e-17!6;CL:0000898!2.02e-17!6;CL:0000809!2.02e-17!6;CL:0000810!2.02e-17!6;CL:0000895!2.02e-17!6;CL:0000808!2.02e-17!6;CL:0000894!2.02e-17!6;CL:0000806!2.02e-17!6;CL:0000807!2.02e-17!6;CL:0000805!2.02e-17!6;CL:0002425!2.02e-17!6;CL:0002436!2.02e-17!6;CL:0002427!2.02e-17!6;CL:0002428!2.02e-17!6;CL:0002429!2.02e-17!6;CL:0002433!2.02e-17!6;CL:0002431!2.02e-17!6;CL:0002432!2.02e-17!6;CL:0000624!2.44e-17!8;CL:0000738!1.50e-15!17;CL:0002087!1.50e-15!17;CL:0002031!1.94e-14!25;CL:0002320!2.69e-11!46;CL:0000134!2.69e-11!46;CL:0000034!3.58e-09!97;CL:0000219!3.69e-09!54;CL:0000063!6.16e-07!66;CL:0000723!7.17e-07!91;CL:0000048!7.17e-07!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.12e-10,11;CL:0000827,1.12e-10,11;CL:0000838,8.23e-10,12;CL:0000542,4.45e-09,13;CL:0000051,4.45e-09,13;CL:0000625,2.89e-08,1;CL:0000355,4.59e-08,9;CL:0000988,7.54e-08,32;CL:0002032,7.54e-08,32;CL:0000037,7.54e-08,32;CL:0000837,7.54e-08,32;CL:0000791,9.33e-08,9;CL:0000789,9.33e-08,9;CL:0002420,9.33e-08,9;CL:0002419,9.33e-08,9;CL:0000790,9.33e-08,9;CL:0000738,5.34e-07,17;CL:0002087,5.34e-07,17 | |||
|ontology_enrichment_disease=DOID:0060100!2.04e-10!3;DOID:4045!2.04e-10!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.59e-23,3;DOID:4045,5.59e-23,3;DOID:0050686,8.07e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.69e-11!46;UBERON:0002370!7.94e-07!23;UBERON:0000974!7.94e-07!23;UBERON:0004807!7.94e-07!23;UBERON:0005058!7.94e-07!23;UBERON:0003351!7.94e-07!23;UBERON:0009113!7.94e-07!23;UBERON:0003295!7.94e-07!23;UBERON:0009722!7.94e-07!23;UBERON:0005562!7.94e-07!23;UBERON:0007690!7.94e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.59e-08,9;UBERON:0002036,4.59e-08,9;UBERON:0002385,4.59e-08,9;UBERON:0000486,4.59e-08,9;UBERON:0007503,4.59e-08,9;UBERON:0001015,4.59e-08,9;UBERON:0002329,4.59e-08,9;UBERON:0003082,4.59e-08,9;UBERON:0003059,4.59e-08,9;UBERON:0007282,4.59e-08,9;UBERON:0004290,4.59e-08,9;UBERON:0009618,4.59e-08,9;UBERON:0000383,2.61e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,1.12630977721333,0.468129052643987,0.171217968225505,0.159544317990673,0.684802919724823,1.83582845079895,0,0,0,0.315462165358238,0.137114433605739,0,0.0850432901510698,0.0992909512008853,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8818223991596,1.5626706890476,5.75876118371178,82.940639812373,15.7100461540443,5.34061388334269,0,0,0,0,0,0,0,0,0,0,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0,1.65191295194984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0.339956859987711,0.839708713941948,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:126325711..126325732,+ | |||
}} |
Latest revision as of 23:06, 3 August 2015
Short description: | p@chr2:126325711..126325732, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:126325711..126325732, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.12e-10 | 11 |
pro-T cell | 1.12e-10 | 11 |
lymphoid lineage restricted progenitor cell | 8.23e-10 | 12 |
lymphocyte | 4.45e-09 | 13 |
common lymphoid progenitor | 4.45e-09 | 13 |
CD8-positive, alpha-beta T cell | 2.89e-08 | 1 |
multi-potent skeletal muscle stem cell | 4.59e-08 | 9 |
hematopoietic cell | 7.54e-08 | 32 |
hematopoietic oligopotent progenitor cell | 7.54e-08 | 32 |
hematopoietic stem cell | 7.54e-08 | 32 |
hematopoietic multipotent progenitor cell | 7.54e-08 | 32 |
mature alpha-beta T cell | 9.33e-08 | 9 |
alpha-beta T cell | 9.33e-08 | 9 |
immature T cell | 9.33e-08 | 9 |
mature T cell | 9.33e-08 | 9 |
immature alpha-beta T cell | 9.33e-08 | 9 |
leukocyte | 5.34e-07 | 17 |
nongranular leukocyte | 5.34e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 4.59e-08 | 9 |
striated muscle tissue | 4.59e-08 | 9 |
muscle tissue | 4.59e-08 | 9 |
multilaminar epithelium | 4.59e-08 | 9 |
epithelial vesicle | 4.59e-08 | 9 |
musculature | 4.59e-08 | 9 |
somite | 4.59e-08 | 9 |
myotome | 4.59e-08 | 9 |
presomitic mesoderm | 4.59e-08 | 9 |
presumptive segmental plate | 4.59e-08 | 9 |
dermomyotome | 4.59e-08 | 9 |
trunk paraxial mesoderm | 4.59e-08 | 9 |
musculature of body | 2.61e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.59e-23 | 3 |
muscle cancer | 5.59e-23 | 3 |
organ system cancer | 8.07e-12 | 6 |