FFCP PHASE1:Mm9::chr11:74336240..74336310,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:74336240..74336310,-|id=chr11:74336240..74336310,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.91e-14!73;UBERON:0005743!9.91e-14!73;UBERON:0000073!1.05e-13!75;UBERON:0001016!1.05e-13!75;UBERON:0004121!1.31e-13!102;UBERON:0000924!1.31e-13!102;UBERON:0006601!1.31e-13!102;UBERON:0002346!9.75e-13!71;UBERON:0003075!9.75e-13!71;UBERON:0007284!9.75e-13!71;UBERON:0001049!7.38e-12!52;UBERON:0005068!7.38e-12!52;UBERON:0006241!7.38e-12!52;UBERON:0007135!7.38e-12!52;UBERON:0000955!1.31e-11!50;UBERON:0006238!1.31e-11!50;UBERON:0000033!2.13e-11!63;UBERON:0002616!4.68e-11!49;UBERON:0003056!2.94e-09!49;UBERON:0003080!4.86e-09!40;UBERON:0002780!9.06e-09!39;UBERON:0001890!9.06e-09!39;UBERON:0006240!9.06e-09!39;UBERON:0002021!3.86e-08!10;UBERON:0000411!3.86e-08!10;UBERON:0001950!3.86e-08!10;UBERON:0002020!7.69e-08!34;UBERON:0000468!2.21e-07!333;UBERON:0007811!3.00e-07!86;UBERON:0001264!6.33e-07!12;UBERON:0003922!6.33e-07!12;UBERON:0002114!6.33e-07!12;UBERON:0003923!6.33e-07!12;UBERON:0003924!6.33e-07!12;UBERON:0003921!6.33e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.17e-17,92;UBERON:0004121,6.21e-14,95;UBERON:0000924,6.21e-14,95;UBERON:0006601,6.21e-14,95;UBERON:0001017,6.34e-14,73;UBERON:0001016,6.74e-14,75;UBERON:0002346,3.19e-13,64;UBERON:0003075,3.19e-13,64;UBERON:0007284,3.19e-13,64;UBERON:0000073,1.31e-12,54;UBERON:0001049,7.02e-12,52;UBERON:0005068,7.02e-12,52;UBERON:0006241,7.02e-12,52;UBERON:0007135,7.02e-12,52;UBERON:0010371,2.20e-11,73;UBERON:0000955,1.87e-10,47;UBERON:0006238,1.87e-10,47;UBERON:0002616,6.52e-10,46;UBERON:0003056,2.25e-09,49;UBERON:0003080,3.75e-09,40;UBERON:0002780,7.06e-09,39;UBERON:0001890,7.06e-09,39;UBERON:0006240,7.06e-09,39;UBERON:0002021,3.08e-08,10;UBERON:0000411,3.08e-08,10;UBERON:0001950,3.08e-08,10;UBERON:0002020,6.19e-08,34;UBERON:0001264,5.25e-07,12|phase1_expression=0,0.697950815278722,0,0,1.00179145989269,2.68606835059024,1.86890112476421,0.129123323441576,0,0,0,0.319088635981346,0,0,0,0.404950534779652,0,1.10411757875383,0.685572168028694,0.84877930359606,4.42225108785563,0,0,1.11994695955385,1.14704640533585,0.57423196411502,1.29228598847722,1.07735616342945,0.760093677825496,1.76421090831952,0.221730510655305,0.635030673459631,0,0,4.33277429626912,3.15845826181135,3.87921776898501,0.418531630736908,0,0,0,0,0.485510353031154,1.38486499773135,1.01376931219515,1.65192076945513,0.782391344348039,5.23260375313072,1.75748946187577,2.13872888981712,3.21968769738334,0,0.335565212115473,0,0,3.08711323243136,2.29226751951005,1.54701627683233,1.41621522601718,1.05798195854407,0.633831403506179,2.71075625655306,1.77858959222228,2.6996991518442,0,0.7104801149461,4.19440154725767,4.2264013585371,2.48855069540346,2.70011876663381,2.3135745748652,5.71301968807607,6.40518768759679,1.71487118900936,2.58782771749238,1.83843757322004,4.40463523997555,14.8117312178818,7.52672012955593,1.58263545276233,1.82975287204819,1.56274011167028,8.93385596804419,5.06486349028512,12.6822545654752,5.89257170947335,5.55249555116501,3.16879057903011,3.86203585999239,1.88928900266964,2.31891590961342,0.860423876981386,0,0,0,0.448026887097336,2.80888840263504,5.62420064507591,2.07828803682295,2.82671659608272,1.54927761754349,2.56652954828636,15.2883143823987,0,1.08245520505607,1.52015919285059,1.51657333504435,2.51204535381932,3.10725460376606,5.19547486726887,2.25530924795977,1.52232739156071,3.22861696158482,2.86373017049983,2.11659672844269,1.75933227861546,1.97755974187499,2.4581890676385,0.884610551949874,2.75003644910596,1.54589062922275,3.87900202508178,1.86391761218122,4.09893115816166,3.35114730901528,2.81002760729451,0,0,0,5.09288173976397,3.66000482254901,2.01046963380583,17.5562563394199,25.8272611903634,5.81806524766768,12.6548185192851,0.611036183101898,1.61729061793121,0.758168275301024,9.6803253707778,1.30120442962704,1.37941262660084,2.34080768746954,2.26057226753573,3.33378845841506,3.20284300712124,4.8724896771059,7.76110112217047,0.215567992932842,1.70195472151037,1.93546236580344,1.31517439456545,1.39023624612799,4.179025998266,2.46938563689532,2.9855140022774,0,0,0,5.38527008592305,7.50483391939508,5.76198596675248,3.07768156260773,4.72234156193769,2.77680803197281,5.11574678450897,5.09719462659276,5.7215017759913,8.72167204541446,9.85004784474571,15.0787985755292,18.5673984030172,15.5880581856646,17.4468344388483,23.131894342054,5.9684675179985,2.97376904685418,0.793351699990633,3.19932375802851,2.32236671860439,2.31961430379768,2.01683524623343,2.66853652613844,2.28270751335071,0.949058123089023,0.823494773620054,2.5133520880027,3.38226002469956,2.72949721966768,5.39291645192533,3.02593269824572,2.98711909881551,1.51734320762465,2.51346727741403,2.25415471346161,2.8511185898344,4.46090720485539,4.48869247298039,4.99568643281633,4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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:74336240..74336310,- | |||
|description=CAGE_peak_at_chr11:74336240..74336310,- | |||
|id=chr11:74336240..74336310,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.91e-14!73;UBERON:0005743!9.91e-14!73;UBERON:0000073!1.05e-13!75;UBERON:0001016!1.05e-13!75;UBERON:0004121!1.31e-13!102;UBERON:0000924!1.31e-13!102;UBERON:0006601!1.31e-13!102;UBERON:0002346!9.75e-13!71;UBERON:0003075!9.75e-13!71;UBERON:0007284!9.75e-13!71;UBERON:0001049!7.38e-12!52;UBERON:0005068!7.38e-12!52;UBERON:0006241!7.38e-12!52;UBERON:0007135!7.38e-12!52;UBERON:0000955!1.31e-11!50;UBERON:0006238!1.31e-11!50;UBERON:0000033!2.13e-11!63;UBERON:0002616!4.68e-11!49;UBERON:0003056!2.94e-09!49;UBERON:0003080!4.86e-09!40;UBERON:0002780!9.06e-09!39;UBERON:0001890!9.06e-09!39;UBERON:0006240!9.06e-09!39;UBERON:0002021!3.86e-08!10;UBERON:0000411!3.86e-08!10;UBERON:0001950!3.86e-08!10;UBERON:0002020!7.69e-08!34;UBERON:0000468!2.21e-07!333;UBERON:0007811!3.00e-07!86;UBERON:0001264!6.33e-07!12;UBERON:0003922!6.33e-07!12;UBERON:0002114!6.33e-07!12;UBERON:0003923!6.33e-07!12;UBERON:0003924!6.33e-07!12;UBERON:0003921!6.33e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.17e-17,92;UBERON:0004121,6.21e-14,95;UBERON:0000924,6.21e-14,95;UBERON:0006601,6.21e-14,95;UBERON:0001017,6.34e-14,73;UBERON:0001016,6.74e-14,75;UBERON:0002346,3.19e-13,64;UBERON:0003075,3.19e-13,64;UBERON:0007284,3.19e-13,64;UBERON:0000073,1.31e-12,54;UBERON:0001049,7.02e-12,52;UBERON:0005068,7.02e-12,52;UBERON:0006241,7.02e-12,52;UBERON:0007135,7.02e-12,52;UBERON:0010371,2.20e-11,73;UBERON:0000955,1.87e-10,47;UBERON:0006238,1.87e-10,47;UBERON:0002616,6.52e-10,46;UBERON:0003056,2.25e-09,49;UBERON:0003080,3.75e-09,40;UBERON:0002780,7.06e-09,39;UBERON:0001890,7.06e-09,39;UBERON:0006240,7.06e-09,39;UBERON:0002021,3.08e-08,10;UBERON:0000411,3.08e-08,10;UBERON:0001950,3.08e-08,10;UBERON:0002020,6.19e-08,34;UBERON:0001264,5.25e-07,12 | |||
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| |||
|short_description=p@chr11:74336240..74336310,- | |||
}} |
Latest revision as of 22:47, 3 August 2015
Short description: | p@chr11:74336240..74336310, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:74336240..74336310, - |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.17e-17 | 92 |
ectoderm-derived structure | 6.21e-14 | 95 |
ectoderm | 6.21e-14 | 95 |
presumptive ectoderm | 6.21e-14 | 95 |
central nervous system | 6.34e-14 | 73 |
nervous system | 6.74e-14 | 75 |
neurectoderm | 3.19e-13 | 64 |
neural plate | 3.19e-13 | 64 |
presumptive neural plate | 3.19e-13 | 64 |
regional part of nervous system | 1.31e-12 | 54 |
neural tube | 7.02e-12 | 52 |
neural rod | 7.02e-12 | 52 |
future spinal cord | 7.02e-12 | 52 |
neural keel | 7.02e-12 | 52 |
ecto-epithelium | 2.20e-11 | 73 |
brain | 1.87e-10 | 47 |
future brain | 1.87e-10 | 47 |
regional part of brain | 6.52e-10 | 46 |
pre-chordal neural plate | 2.25e-09 | 49 |
anterior neural tube | 3.75e-09 | 40 |
regional part of forebrain | 7.06e-09 | 39 |
forebrain | 7.06e-09 | 39 |
future forebrain | 7.06e-09 | 39 |
occipital lobe | 3.08e-08 | 10 |
visual cortex | 3.08e-08 | 10 |
neocortex | 3.08e-08 | 10 |
gray matter | 6.19e-08 | 34 |
pancreas | 5.25e-07 | 12 |