FFCP PHASE1:Mm9::chr16:49855202..49855213,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=657|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:49855202..49855213,+|id=chr16:49855202..49855213,+|ontology_enrichment_celltype=CL:0000988!1.06e-10!32;CL:0002032!1.06e-10!32;CL:0000037!1.06e-10!32;CL:0000566!1.06e-10!32;CL:0000837!1.06e-10!32;CL:0002031!1.32e-07!25|ontology_enrichment_celltype_v019_2=CL:0000988,6.32e-16,32;CL:0002032,6.32e-16,32;CL:0000037,6.32e-16,32;CL:0000837,6.32e-16,32;CL:0000049,9.29e-13,19;CL:0002320,1.66e-10,46;CL:0000134,1.66e-10,46;CL:0002031,4.91e-09,25;CL:0000763,1.02e-08,16;CL:0000219,3.83e-08,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!2.82e-15!70;UBERON:0002193!9.74e-11!48;UBERON:0005057!2.24e-10!51;UBERON:0002390!7.22e-10!45;UBERON:0003061!7.22e-10!45;UBERON:0005911!1.14e-07!69;UBERON:0000490!1.95e-07!66;UBERON:0003929!7.90e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.66e-10,46;UBERON:0001474,4.82e-10,22;UBERON:0004765,4.82e-10,22;UBERON:0001434,4.82e-10,22;UBERON:0002204,5.15e-10,32;UBERON:0002193,1.24e-09,48;UBERON:0002405,1.24e-09,48;UBERON:0002390,1.65e-09,45;UBERON:0003061,1.65e-09,45;UBERON:0002106,8.34e-09,6;UBERON:0004457,8.34e-09,6;UBERON:0000042,8.34e-09,6;UBERON:0004854,8.34e-09,6;UBERON:0009034,8.34e-09,6;UBERON:0002095,8.34e-09,6;UBERON:0004782,8.34e-09,6;UBERON:0003281,8.34e-09,6;UBERON:0009664,8.34e-09,6;UBERON:0002296,8.34e-09,6;UBERON:0005602,8.34e-09,6;UBERON:0001179,8.34e-09,6;UBERON:0006293,8.34e-09,6;UBERON:0002371,9.00e-09,16;UBERON:0003887,2.17e-08,10|phase1_expression=0,0.697950815278722,1.36499771816861,0,0,0.839396359559449,0.233612640595526,1.16210991097419,1.83025338797167,1.40438715793196,0.68487187290202,0.957265907944037,0.513602189793617,0.437102012094987,1.99865857089398,2.63217847606774,3.49780939064073,0.946386496074713,0.685572168028694,3.39511721438424,0.0850432901510698,4.96454756004426,2.35079810225042,0.319984845586813,0.68822784320151,1.14846392823004,0.86152399231815,0.646413698057667,0,0,0.886922042621219,0,1.23012957516914,0,0,0.166234645358492,0.204169356262369,25.5304294749514,14.8453715459522,24.0820922227947,14.1175557127443,17.0761371239611,21.8479658864019,0.251793635951155,0.202753862439029,0.183546752161682,0,0,0,0.194429899074283,0.139986421625363,0,0.671130424230945,1.45072428402269,3.6970317905671,0.514518872071894,0.286533439938757,0,0.404632921719196,0,0,0.338844532069132,0,0,0,1.4209602298922,0,0,0.311068836925433,0,0.210324961351382,0,0,0,0.0958454710182364,0,0,0,0,0.263772575460388,0.274462930807229,0.52091337055676,0,0,0,0,0,0,0.227178579999552,0.151143120213571,0.289864488701678,0,0.679971333707751,0,0,0.448026887097336,0.561777680527007,0,0,0,0,0,5.09610479413291,7.11066703153331,0,0,0,0.34255163915718,1.55362730188303,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0.502666365318702,0.494389935468748,0.144599356919912,2.65383165584962,0.323533699894818,1.98757366614354,2.90925151881133,0,0,0,0,10.9031763300387,17.9970819298022,19.3146745151058,0,0,0.125654352112864,0,0,0.20778804455956,0,0.203678727700633,1.8661045591514,0,0.420883711772948,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0.219195732427575,0,0,0,0,11.937624184325,20.8451804762919,20.4597719564827,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.162137619091711,0.292399974850665,0,0.134206418760372,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0.329397909448022,0,0,0.38992817423824,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.370191491765402,0.889357881261447,0.333690211432188,1.17935397067922,0.674586337154561,1.62288097110802,3.37648023653384,1.78238096246994,0.863088412352432,3.08056930872567,1.64736847912849,1.43768206527355,0.372140947668503,0.624075346229121,0.252578877947112,0.538192240565737,0.482443521363367,0.554259570499814,0,0.162964976442026,0.339490171550376,0.234690248288502,0,0.238043640886014,1.36593553500459,0.157635144106191,0.221464689648775,0.478364305972461,0.655453258862952,0.345369963731791,0.867894351489069,6.03165135757089,1.63171705145613,0.491764273019036,0.275936746304732,0,0,0.163934945376675,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0.534196811001766,0,0.494910368917606,1.32745138339963,0,0,0.188605079755898,0,0,0,0,0,0,0,0,1.36175842301515,0,0,0,0,0.356737635204141,0.329098041204242,1.2178597964584,1.17335854031855,0.21183207086382,0,0.49465875882444,0.645857706783622,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,2.39219233116994,1.44470807574256,1.11116716421827,3.20226376907975,2.46049609897845,3.66045077130436,4.9293744698218,4.75834937900437,5.38979897837253,0,0,0.203319467126849,0.108005340821801,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0.405450430580328,0.513554785824136,0.389762468933385,0.358053391334963,0.39736270956253,0.120195449519969,0.147689527174577,0.403865799792591,0.15241361331,0.100826185136841,0.194915761479505,0.288635524920988,0.584384510907845,0,0,0,0.335769232728157,0.386379188064381,0.750729901804728,0.36630324853453,0.428736758158132,1.00314420807073,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.486213434136588,0.419226325255965,0.551530525350042,0,0,0,0.505394423527595,0.25347929989024,0.188626341386076,0.0936415074698824,0.192075457214608,0.114870937911227,0,0.695305955669133,0.192909220463705,0,0,0,0.532427418478012,0,0,0.0941093804153306,0.507687647350059,0,0.526139422875686,0,0.561142271657738,0.355905054372522,0.394017929502254,0,0.309873682371932,0,0.249810577937946,0.233931608445408,0.429742108096597,0.191288332068843,1.10295709559758,0.927471342481686|short_description=p@chr16:49855202..49855213,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=657 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:49855202..49855213,+ | |||
|description=CAGE_peak_at_chr16:49855202..49855213,+ | |||
|id=chr16:49855202..49855213,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.06e-10!32;CL:0002032!1.06e-10!32;CL:0000037!1.06e-10!32;CL:0000566!1.06e-10!32;CL:0000837!1.06e-10!32;CL:0002031!1.32e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.32e-16,32;CL:0002032,6.32e-16,32;CL:0000037,6.32e-16,32;CL:0000837,6.32e-16,32;CL:0000049,9.29e-13,19;CL:0002320,1.66e-10,46;CL:0000134,1.66e-10,46;CL:0002031,4.91e-09,25;CL:0000763,1.02e-08,16;CL:0000219,3.83e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.82e-15!70;UBERON:0002193!9.74e-11!48;UBERON:0005057!2.24e-10!51;UBERON:0002390!7.22e-10!45;UBERON:0003061!7.22e-10!45;UBERON:0005911!1.14e-07!69;UBERON:0000490!1.95e-07!66;UBERON:0003929!7.90e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.66e-10,46;UBERON:0001474,4.82e-10,22;UBERON:0004765,4.82e-10,22;UBERON:0001434,4.82e-10,22;UBERON:0002204,5.15e-10,32;UBERON:0002193,1.24e-09,48;UBERON:0002405,1.24e-09,48;UBERON:0002390,1.65e-09,45;UBERON:0003061,1.65e-09,45;UBERON:0002106,8.34e-09,6;UBERON:0004457,8.34e-09,6;UBERON:0000042,8.34e-09,6;UBERON:0004854,8.34e-09,6;UBERON:0009034,8.34e-09,6;UBERON:0002095,8.34e-09,6;UBERON:0004782,8.34e-09,6;UBERON:0003281,8.34e-09,6;UBERON:0009664,8.34e-09,6;UBERON:0002296,8.34e-09,6;UBERON:0005602,8.34e-09,6;UBERON:0001179,8.34e-09,6;UBERON:0006293,8.34e-09,6;UBERON:0002371,9.00e-09,16;UBERON:0003887,2.17e-08,10 | |||
|phase1_expression=0,0.697950815278722,1.36499771816861,0,0,0.839396359559449,0.233612640595526,1.16210991097419,1.83025338797167,1.40438715793196,0.68487187290202,0.957265907944037,0.513602189793617,0.437102012094987,1.99865857089398,2.63217847606774,3.49780939064073,0.946386496074713,0.685572168028694,3.39511721438424,0.0850432901510698,4.96454756004426,2.35079810225042,0.319984845586813,0.68822784320151,1.14846392823004,0.86152399231815,0.646413698057667,0,0,0.886922042621219,0,1.23012957516914,0,0,0.166234645358492,0.204169356262369,25.5304294749514,14.8453715459522,24.0820922227947,14.1175557127443,17.0761371239611,21.8479658864019,0.251793635951155,0.202753862439029,0.183546752161682,0,0,0,0.194429899074283,0.139986421625363,0,0.671130424230945,1.45072428402269,3.6970317905671,0.514518872071894,0.286533439938757,0,0.404632921719196,0,0,0.338844532069132,0,0,0,1.4209602298922,0,0,0.311068836925433,0,0.210324961351382,0,0,0,0.0958454710182364,0,0,0,0,0.263772575460388,0.274462930807229,0.52091337055676,0,0,0,0,0,0,0.227178579999552,0.151143120213571,0.289864488701678,0,0.679971333707751,0,0,0.448026887097336,0.561777680527007,0,0,0,0,0,5.09610479413291,7.11066703153331,0,0,0,0.34255163915718,1.55362730188303,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0.502666365318702,0.494389935468748,0.144599356919912,2.65383165584962,0.323533699894818,1.98757366614354,2.90925151881133,0,0,0,0,10.9031763300387,17.9970819298022,19.3146745151058,0,0,0.125654352112864,0,0,0.20778804455956,0,0.203678727700633,1.8661045591514,0,0.420883711772948,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0.219195732427575,0,0,0,0,11.937624184325,20.8451804762919,20.4597719564827,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.162137619091711,0.292399974850665,0,0.134206418760372,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0.329397909448022,0,0,0.38992817423824,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.370191491765402,0.889357881261447,0.333690211432188,1.17935397067922,0.674586337154561,1.62288097110802,3.37648023653384,1.78238096246994,0.863088412352432,3.08056930872567,1.64736847912849,1.43768206527355,0.372140947668503,0.624075346229121,0.252578877947112,0.538192240565737,0.482443521363367,0.554259570499814,0,0.162964976442026,0.339490171550376,0.234690248288502,0,0.238043640886014,1.36593553500459,0.157635144106191,0.221464689648775,0.478364305972461,0.655453258862952,0.345369963731791,0.867894351489069,6.03165135757089,1.63171705145613,0.491764273019036,0.275936746304732,0,0,0.163934945376675,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0.534196811001766,0,0.494910368917606,1.32745138339963,0,0,0.188605079755898,0,0,0,0,0,0,0,0,1.36175842301515,0,0,0,0,0.356737635204141,0.329098041204242,1.2178597964584,1.17335854031855,0.21183207086382,0,0.49465875882444,0.645857706783622,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,2.39219233116994,1.44470807574256,1.11116716421827,3.20226376907975,2.46049609897845,3.66045077130436,4.9293744698218,4.75834937900437,5.38979897837253,0,0,0.203319467126849,0.108005340821801,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0.405450430580328,0.513554785824136,0.389762468933385,0.358053391334963,0.39736270956253,0.120195449519969,0.147689527174577,0.403865799792591,0.15241361331,0.100826185136841,0.194915761479505,0.288635524920988,0.584384510907845,0,0,0,0.335769232728157,0.386379188064381,0.750729901804728,0.36630324853453,0.428736758158132,1.00314420807073,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.486213434136588,0.419226325255965,0.551530525350042,0,0,0,0.505394423527595,0.25347929989024,0.188626341386076,0.0936415074698824,0.192075457214608,0.114870937911227,0,0.695305955669133,0.192909220463705,0,0,0,0.532427418478012,0,0,0.0941093804153306,0.507687647350059,0,0.526139422875686,0,0.561142271657738,0.355905054372522,0.394017929502254,0,0.309873682371932,0,0.249810577937946,0.233931608445408,0.429742108096597,0.191288332068843,1.10295709559758,0.927471342481686 | |||
|short_description=p@chr16:49855202..49855213,+ | |||
}} |
Latest revision as of 22:14, 3 August 2015
Short description: | p@chr16:49855202..49855213, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:49855202..49855213, + |
Coexpression cluster: | MCL_coexpression_mm9:657 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 6.32e-16 | 32 |
hematopoietic oligopotent progenitor cell | 6.32e-16 | 32 |
hematopoietic stem cell | 6.32e-16 | 32 |
hematopoietic multipotent progenitor cell | 6.32e-16 | 32 |
common myeloid progenitor | 9.29e-13 | 19 |
connective tissue cell | 1.66e-10 | 46 |
mesenchymal cell | 1.66e-10 | 46 |
hematopoietic lineage restricted progenitor cell | 4.91e-09 | 25 |
myeloid cell | 1.02e-08 | 16 |
motile cell | 3.83e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.66e-10 | 46 |
bone element | 4.82e-10 | 22 |
skeletal element | 4.82e-10 | 22 |
skeletal system | 4.82e-10 | 22 |
musculoskeletal system | 5.15e-10 | 32 |
hemolymphoid system | 1.24e-09 | 48 |
immune system | 1.24e-09 | 48 |
hematopoietic system | 1.65e-09 | 45 |
blood island | 1.65e-09 | 45 |
spleen | 8.34e-09 | 6 |
cavity lining | 8.34e-09 | 6 |
serous membrane | 8.34e-09 | 6 |
gastrointestinal system mesentery | 8.34e-09 | 6 |
stomach region | 8.34e-09 | 6 |
mesentery | 8.34e-09 | 6 |
gastrointestinal system serosa | 8.34e-09 | 6 |
mesentery of stomach | 8.34e-09 | 6 |
gut mesentery | 8.34e-09 | 6 |
dorsal mesentery | 8.34e-09 | 6 |
dorsal mesogastrium | 8.34e-09 | 6 |
peritoneal cavity | 8.34e-09 | 6 |
spleen primordium | 8.34e-09 | 6 |
bone marrow | 9.00e-09 | 16 |
intraembryonic coelom | 2.17e-08 | 10 |