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FFCP PHASE1:Mm9::chr5:137791358..137791374,+: Difference between revisions

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{{FFCP|EntrezGene=13846|HGNC=|MCL_coexpression_id=1813|UniProt=P54761|association_with_transcript=0bp_to_ENSMUST00000144296_5end|description=CAGE_peak_2_at_Ephb4_5end|id=chr5:137791358..137791374,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!6.12e-09!14;UBERON:0000117!6.12e-09!14;UBERON:0000171!6.12e-09!14;UBERON:0000170!6.12e-09!14;UBERON:0005597!6.12e-09!14;UBERON:0000118!6.12e-09!14;UBERON:0000468!7.41e-09!333;UBERON:0007100!7.63e-09!18;UBERON:0000948!7.63e-09!18;UBERON:0005498!7.63e-09!18;UBERON:0004140!7.63e-09!18;UBERON:0009881!7.63e-09!18;UBERON:0004141!7.63e-09!18;UBERON:0003084!7.63e-09!18;UBERON:0007005!7.63e-09!18;UBERON:0004139!7.63e-09!18;UBERON:0004291!7.63e-09!18;UBERON:0004535!4.59e-08!23;UBERON:0001009!4.59e-08!23;UBERON:0000922!1.04e-07!328;UBERON:0005178!4.71e-07!17;UBERON:0005181!4.71e-07!17;UBERON:0002224!4.71e-07!17;UBERON:0000915!4.71e-07!17;UBERON:0008947!4.71e-07!17;UBERON:0003258!4.71e-07!17;UBERON:0005153!6.81e-07!17;UBERON:0005157!6.95e-07!27;UBERON:0001048!7.52e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0002048,5.91e-09,14;UBERON:0000117,5.91e-09,14;UBERON:0000171,5.91e-09,14;UBERON:0000170,5.91e-09,14;UBERON:0005597,5.91e-09,14;UBERON:0000118,5.91e-09,14;UBERON:0007100,7.38e-09,18;UBERON:0000948,7.38e-09,18;UBERON:0005498,7.38e-09,18;UBERON:0004140,7.38e-09,18;UBERON:0009881,7.38e-09,18;UBERON:0004141,7.38e-09,18;UBERON:0003084,7.38e-09,18;UBERON:0007005,7.38e-09,18;UBERON:0004139,7.38e-09,18;UBERON:0004291,7.38e-09,18;UBERON:0005177,2.99e-08,79;UBERON:0004535,4.45e-08,23;UBERON:0001009,4.45e-08,23;UBERON:0005178,4.59e-07,17;UBERON:0005181,4.59e-07,17;UBERON:0002224,4.59e-07,17;UBERON:0000915,4.59e-07,17;UBERON:0008947,4.59e-07,17;UBERON:0003258,4.59e-07,17;UBERON:0002100,6.19e-07,90;UBERON:0005153,6.64e-07,17|phase1_expression=10.4096750618116,1.39590163055744,2.27499619694768,1.20985684522732,3.50627010962443,13.9339795686869,8.1764424208434,0,0,0,0,0,0,0,0.999329285446988,0.809901069559304,0,0,0,0,8.67441559540912,0.0992909512008853,0,6.23970448894286,6.65286915094793,2.29692785646008,3.01533397311352,4.30942465371778,6.08074942260396,12.8535366177565,8.42575940490158,0,0,0,18.4865036640816,15.6260566636983,16.5377178572519,0,0,0,0,0,0,7.05022180663233,8.21153142878068,6.60768307782054,23.4717403304412,7.84890562969608,3.95435128922049,7.97162586204562,9.23910382727393,5.75010257459886,0,0,0,14.406528418013,14.8997388768154,9.28209766099396,1.82084814773638,1.05798195854407,3.80298842103708,11.8595586224196,9.78224275722253,0.449949858640699,1.97773272513395,0.7104801149461,8.08920298399693,4.61061966385865,2.69592992002042,3.78016627328734,2.73422449756797,2.28520787523043,1.98781686856452,1.5923803897944,2.1086003624012,4.5960939330501,3.30347642998166,1.14918604276669,1.38245879930619,1.45074916503213,1.18933936683133,2.6045668527838,1.11673199600552,1.68828783009504,1.98637722109853,2.65165726926301,1.70846016958924,1.67759501242771,1.81742863999642,3.77857800533928,83.7708372347849,8.60423876981386,0,5.93673510801599,6.49776417447669,5.82434953226536,4.35377702408431,5.28333999991979,3.89679006904303,6.71345191569646,6.4787973097273,8.98285341900225,12.7402619853323,7.11066703153331,3.68034769719064,5.82727690592727,6.0662933401774,6.50848114398642,2.33044095282455,8.90652834388949,17.0015620230813,13.0920155674221,11.5307748628029,10.0984169170257,12.1116368349776,10.3046604890334,5.6854842578906,5.63937491987655,0,12.7795811458453,4.85851340612866,8.727754556434,5.59175283654366,1.75668478206928,1.8850203613211,9.19645398750929,0,0,0,2.24685959107234,1.37250180845588,1.13088916901578,0.869121600961382,1.02286182932132,1.45451631191692,1.46017136760982,19.8586759508117,6.84238338355512,2.0217820674694,3.57751155007006,15.0939713836736,4.36813998423599,8.46292010085141,9.49440352365005,5.8511389270142,5.63700369253339,6.1843138209421,3.62184719034622,17.8921434134259,24.2055782614809,23.4014995138052,18.4124415239163,19.4633074457919,18.805616992197,14.1989674121481,17.5150154800274,0,0,0,15.3273071676271,17.12040237862,14.4049649168812,14.9149183418682,15.1508458445501,15.2724441758504,22.3232586960392,17.7060444923749,18.4489240940128,18.9243827400503,22.326775114757,19.2943766719137,16.0819986167866,17.344459107993,19.7283435577747,1.68231958851302,2.6755199218614,0.991256348951394,10.3135720998782,16.2099070406778,15.7920936865098,14.4331556680745,12.5043785266472,10.229390016864,7.98947629672748,8.54152310780121,8.39964669092456,9.55073793441024,9.35095418593409,10.1381325301942,25.1669434423182,9.29393614461185,8.36393347668342,14.6044283733873,12.9100819248994,12.3978509240388,18.5322708339236,15.7101514605777,14.097299797954,18.4018323031589,12.1040321343274,9.89091985400661,12.5865107200237,8.30067355844017,5.5058884886311,5.50365186316968,4.04751802292737,5.88294352026658,5.788251834058,5.34714288740982,8.63088412352432,7.4582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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:13846
|HGNC=
|MCL_coexpression_id=1813
|TSSclassifier=NA
|UniProt=uniprot:P54761
|association_with_transcript=0bp_to_ENSMUST00000144296_5end
|cluster_id=chr5:137791358..137791374,+
|description=CAGE_peak_2_at_Ephb4_5end
|id=chr5:137791358..137791374,+
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|ontology_enrichment_uberon_v019_2=UBERON:0002048,5.91e-09,14;UBERON:0000117,5.91e-09,14;UBERON:0000171,5.91e-09,14;UBERON:0000170,5.91e-09,14;UBERON:0005597,5.91e-09,14;UBERON:0000118,5.91e-09,14;UBERON:0007100,7.38e-09,18;UBERON:0000948,7.38e-09,18;UBERON:0005498,7.38e-09,18;UBERON:0004140,7.38e-09,18;UBERON:0009881,7.38e-09,18;UBERON:0004141,7.38e-09,18;UBERON:0003084,7.38e-09,18;UBERON:0007005,7.38e-09,18;UBERON:0004139,7.38e-09,18;UBERON:0004291,7.38e-09,18;UBERON:0005177,2.99e-08,79;UBERON:0004535,4.45e-08,23;UBERON:0001009,4.45e-08,23;UBERON:0005178,4.59e-07,17;UBERON:0005181,4.59e-07,17;UBERON:0002224,4.59e-07,17;UBERON:0000915,4.59e-07,17;UBERON:0008947,4.59e-07,17;UBERON:0003258,4.59e-07,17;UBERON:0002100,6.19e-07,90;UBERON:0005153,6.64e-07,17
|phase1_expression=10.4096750618116,1.39590163055744,2.27499619694768,1.20985684522732,3.50627010962443,13.9339795686869,8.1764424208434,0,0,0,0,0,0,0,0.999329285446988,0.809901069559304,0,0,0,0,8.67441559540912,0.0992909512008853,0,6.23970448894286,6.65286915094793,2.29692785646008,3.01533397311352,4.30942465371778,6.08074942260396,12.8535366177565,8.42575940490158,0,0,0,18.4865036640816,15.6260566636983,16.5377178572519,0,0,0,0,0,0,7.05022180663233,8.21153142878068,6.60768307782054,23.4717403304412,7.84890562969608,3.95435128922049,7.97162586204562,9.23910382727393,5.75010257459886,0,0,0,14.406528418013,14.8997388768154,9.28209766099396,1.82084814773638,1.05798195854407,3.80298842103708,11.8595586224196,9.78224275722253,0.449949858640699,1.97773272513395,0.7104801149461,8.08920298399693,4.61061966385865,2.69592992002042,3.78016627328734,2.73422449756797,2.28520787523043,1.98781686856452,1.5923803897944,2.1086003624012,4.5960939330501,3.30347642998166,1.14918604276669,1.38245879930619,1.45074916503213,1.18933936683133,2.6045668527838,1.11673199600552,1.68828783009504,1.98637722109853,2.65165726926301,1.70846016958924,1.67759501242771,1.81742863999642,3.77857800533928,83.7708372347849,8.60423876981386,0,5.93673510801599,6.49776417447669,5.82434953226536,4.35377702408431,5.28333999991979,3.89679006904303,6.71345191569646,6.4787973097273,8.98285341900225,12.7402619853323,7.11066703153331,3.68034769719064,5.82727690592727,6.0662933401774,6.50848114398642,2.33044095282455,8.90652834388949,17.0015620230813,13.0920155674221,11.5307748628029,10.0984169170257,12.1116368349776,10.3046604890334,5.6854842578906,5.63937491987655,0,12.7795811458453,4.85851340612866,8.727754556434,5.59175283654366,1.75668478206928,1.8850203613211,9.19645398750929,0,0,0,2.24685959107234,1.37250180845588,1.13088916901578,0.869121600961382,1.02286182932132,1.45451631191692,1.46017136760982,19.8586759508117,6.84238338355512,2.0217820674694,3.57751155007006,15.0939713836736,4.36813998423599,8.46292010085141,9.49440352365005,5.8511389270142,5.63700369253339,6.1843138209421,3.62184719034622,17.8921434134259,24.2055782614809,23.4014995138052,18.4124415239163,19.4633074457919,18.805616992197,14.1989674121481,17.5150154800274,0,0,0,15.3273071676271,17.12040237862,14.4049649168812,14.9149183418682,15.1508458445501,15.2724441758504,22.3232586960392,17.7060444923749,18.4489240940128,18.9243827400503,22.326775114757,19.2943766719137,16.0819986167866,17.344459107993,19.7283435577747,1.68231958851302,2.6755199218614,0.991256348951394,10.3135720998782,16.2099070406778,15.7920936865098,14.4331556680745,12.5043785266472,10.229390016864,7.98947629672748,8.54152310780121,8.39964669092456,9.55073793441024,9.35095418593409,10.1381325301942,25.1669434423182,9.29393614461185,8.36393347668342,14.6044283733873,12.9100819248994,12.3978509240388,18.5322708339236,15.7101514605777,14.097299797954,18.4018323031589,12.1040321343274,9.89091985400661,12.5865107200237,8.30067355844017,5.5058884886311,5.50365186316968,4.04751802292737,5.88294352026658,5.788251834058,5.34714288740982,8.63088412352432,7.45822043165163,7.4131581560782,17.2521847832825,10.0478055870496,13.7296576170407,8.5876818502018,6.45830688678884,6.27176577772377,14.4107488329952,14.4013472945568,12.711268162478,15.6165478913173,19.0099101113687,19.9332446355761,25.7087132156895,28.2943789393808,24.748717624672,23.0323277234726,30.9342251195525,29.6592599635486,22.9671025881641,27.7726192476502,0,0,4.91764273019036,6.07060841870411,1.44495530989013,0.820481806145422,8.19674726883377,5.04941854408746,7.57219726599016,5.0757036758563,6.03185513651837,7.40803273652911,8.91194696329577,7.35998980050964,7.69140333182299,5.84511715822624,5.53402889125133,1.28528526568723,8.23252494207958,22.9704628730759,18.2433394476005,12.8676695918578,5.30980553359851,17.9657670754686,18.1394134178851,12.2593301841334,17.1275097870848,10.4527950300935,11.1124166062335,11.6330793432802,13.1904030002347,6.32073515871632,8.4334886859999,7.21948802737308,2.04263763452273,16.9257428389432,14.1000965323202,18.6473220477485,14.5418991586664,20.334045206636,19.2522354104482,16.4411072521884,6.57080782578389,5.08396970073168,2.42581237860458,6.43056386471772,15.0161916827192,10.3738230876428,11.1016279922917,9.52017218521355,10.2018292820448,1.11255181206306,1.53783792718067,21.0514605322487,9.63011542322501,4.1441060541032,1.91371918809435,1.37266903923914,0,0.139951452323658,0.276399947608848,3.81868247206045,14.3932877079417,13.0124458961183,14.0406943068342,11.0816796887668,10.4814030598165,11.8680624818642,11.075563067195,6.28214260761671,8.03612834409116,4.34937519160848,0.56369293868419,14.054555328134,13.4021377270249,16.5283510092441,14.2075805825504,11.9958849098453,14.317583114782,8.59348939970071,5.55754525456268,1.93267296660805,0.864090018773596,1.26404448251271,12.9744137785705,8.52500944468066,2.98817892848929,5.90788095702689,1.39076948346885,1.20195449519969,0.886137163047463,1.31256384932592,1.447929326445,1.20991422164209,1.36441033035653,0.577271049841977,0.233753804363138,3.17422537061296,2.44184548711471,1.70456327558004,1.67884616364078,8.50034213741638,7.50729901804728,6.59345847362154,6.00231461421384,2.50786052017682,0,0,2.86447756719698,1.20297227640581,0.685082519770642,0,0,0,0,0,7.36890167847654,6.78342284781753,10.0732827394939,12.8846560046196,4.82110274044359,4.04455718590031,9.11211583986622,11.1258930909003,8.02298023979538,9.09709962349671,9.88569269571935,9.61994341068989,11.2369808963859,10.9483010612326,12.3486258254569,11.9073422820768,10.7772423128716,12.9249177710682,10.714233420886,11.9231125308862,9.94320831917705,12.600782237313,8.34526664815623,7.70336008151341,7.90518795488777,12.0152743206181,12.8049581010941,8.94437018888666,10.8643291076689,13.4674145197857,11.5075967580449,11.9190423674432,6.54769669071503,9.60608415352989,12.346023102793,9.99242311751784,8.65546951248011,10.5286816483666,12.242453252406,7.94129108830256,7.88350641109433
|short_description=p2@Ephb4
}}

Revision as of 21:22, 3 August 2015

Short description:p2@Ephb4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ephb4_5end
Coexpression cluster:MCL_coexpression_mm9:1813
Association with transcript: 0bp_to_ENSMUST00000144296_5end
EntrezGene:13846
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ephb4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.41
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I713.93
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.18
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.65
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I24.31
Ileum epithelium, pool1.CNhs13199.10252-104B96.08
Ileum epithelium, pool2.CNhs13232.10253-104C112.85
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F518.49
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F615.63
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F716.54
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.05
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.21
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.61
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B723.47
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.85
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.95
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C114.41
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E114.90
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.28
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C611.86
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C88.09
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D91.82
Mouse Schwann, donor2.CNhs12573.11746-123F93.78
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G383.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.94
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.83
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.51
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D78.91
adrenal gland, embryo E14.CNhs11038.406-44C517.00
adrenal gland, embryo E16.CNhs11004.1254-43D613.09
adrenal gland, embryo E17.CNhs11043.1263-45I111.53
adrenal gland, embryo E18.CNhs11026.1262-18F510.10
adrenal gland, neonate N00.CNhs11191.1311-23C112.11
adrenal gland, neonate N25.CNhs11223.1377-27I310.30
amnion, adult pregnant day17.5.CNhs10488.583-22A85.69
aorta, adult.CNhs10498.46-23H15.64
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F512.78
bone (os femoris), neonate N16.CNhs11225.1525-43A64.86
bone (os femoris), neonate N20.CNhs11195.1350-25C38.73
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H79.20
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B119.86
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.84
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C615.09
eyeball, embryo E14.CNhs10521.399-16E24.37
eyeball, embryo E15.CNhs10593.426-16C98.46
eyeball, embryo E17.CNhs11023.1261-18D49.49
eyeball, neonate N00.CNhs11207.633-15C65.85
eyeball, neonate N01.CNhs11140.1532-43E75.64
eyeball, neonate N02.CNhs11205.1551-44G86.18
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E217.89
forelimb, embryo E12.CNhs10600.359-14H224.21
forelimb, embryo E13.CNhs10589.384-1E223.40
forelimb, embryo E14.CNhs10577.413-26A818.41
forelimb, embryo E15.CNhs11007.437-20E719.46
forelimb, embryo E17.CNhs10598.1517-43C418.81
forelimb, embryo E18.CNhs11008.1520-43B514.20
gonad, embryo E13.CNhs11044.1564-45I617.52
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E915.33
heart, embryo E12.CNhs11015.353-12F517.12
heart, embryo E13.CNhs11013.376-3I914.40
heart, embryo E14.CNhs10597.403-26D414.91
heart, embryo E15.CNhs11017.431-16C815.15
heart, embryo E16.CNhs11021.457-17C615.27
heart, embryo E17.CNhs11025.479-18E522.32
heart, embryo E18.CNhs11030.1283-20G317.71
heart, neonate N00.CNhs11213.639-21E318.45
heart, neonate N03.CNhs11221.1349-25I218.92
heart, neonate N10.CNhs11118.749-24G122.33
heart, neonate N16.CNhs11209.782-15G119.29
heart, neonate N20.CNhs11127.821-26I616.08
heart, neonate N25.CNhs11196.1351-25D317.34
heart, neonate N30.CNhs11202.1390-42D219.73
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A310.31
intestine, embryo E12.CNhs11019.1251-16I516.21
intestine, embryo E13.CNhs11010.381-16D515.79
intestine, embryo E15.CNhs10602.976-16D814.43
intestine, embryo E16.CNhs10585.463-22H412.50
intestine, embryo E17.CNhs10582.482-18D310.23
intestine, embryo E18.CNhs10526.1289-20F77.99
intestine, neonate N00.CNhs11126.644-26D18.54
intestine, neonate N01.CNhs11192.1322-23E98.40
intestine, neonate N06.CNhs11102.688-20B89.55
intestine, neonate N07.CNhs11095.720-20F29.35
intestine, neonate N10.CNhs11098.755-23A510.14
intestine, neonate N20.CNhs11187.827-18D125.17
intestine, neonate N25.CNhs11121.1352-25E39.29
intestine, neonate N30.CNhs11131.1384-42G18.36
kidney, embryo E14.CNhs10606.411-4I914.60
kidney, embryo E15.CNhs10997.434-16F812.91
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I218.53
kidney, embryo E18.CNhs11001.1288-20C715.71
kidney, neonate N00.CNhs11214.646-21G714.10
kidney, neonate N10.CNhs11206.758-6D518.40
kidney, neonate N20.CNhs11113.832-19I112.10
kidney, neonate N25.CNhs11122.1353-25F39.89
kidney, neonate N30.CNhs11203.1385-42H112.59
liver, adult pregnant day01.CNhs10466.508-5B28.30
liver, embryo E12.CNhs10601.355-15F85.51
liver, embryo E13.CNhs10524.378-3H65.50
liver, embryo E14.CNhs10594.409-16E14.05
liver, embryo E15.CNhs10520.433-16D75.88
liver, embryo E16.CNhs10523.462-17F55.79
liver, embryo E17.CNhs10510.481-18A35.35
liver, embryo E18.CNhs10579.499-43G48.63
liver, neonate N00.CNhs11117.641-24F47.46
liver, neonate N03.CNhs11123.1345-25G27.41
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H210.05
liver, neonate N10.CNhs11115.751-24B913.73
liver, neonate N20.CNhs11220.823-25A38.59
liver, neonate N25.CNhs11198.1368-26H16.46
liver, neonate N30.CNhs11106.1382-42D16.27
lung, adult.CNhs10474.28-22B114.41
lung, embryo E12.CNhs10522.354-16G214.40
lung, embryo E14.CNhs10604.404-26F812.71
lung, embryo E15.CNhs11020.432-17C515.62
lung, embryo E16.CNhs10998.458-17B619.01
lung, embryo E17.CNhs10605.480-44A619.93
lung, embryo E18.CNhs10583.1287-20I625.71
lung, neonate N00.CNhs11224.640-42C628.29
lung, neonate N06.CNhs11212.683-20E524.75
lung, neonate N07.CNhs11111.715-19A323.03
lung, neonate N10.CNhs11219.750-23E630.93
lung, neonate N20.CNhs11109.822-18A429.66
lung, neonate N25.CNhs11119.1359-25C722.97
lung, neonate N30.CNhs11133.1394-42H227.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H26.07
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.20
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.05
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.57
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.03
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.41
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.91
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.36
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.85
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.53
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I78.23
ovary, embryo E18.CNhs11040.505-44H722.97
ovary, neonate N00.CNhs11217.1299-22I418.24
oviduct, adult pregnant day01.CNhs10500.988-6G612.87
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F417.97
pancreas, embryo E15.CNhs11042.1556-45F218.14
pancreas, embryo E16.CNhs11003.460-26E512.26
pancreas, embryo E17.CNhs10599.1558-45G317.13
pancreas, embryo E18.CNhs10580.1535-43I710.45
pancreas, neonate N00.CNhs11105.645-26G911.11
pancreas, neonate N01.CNhs11138.1531-43D711.63
pancreas, neonate N02.CNhs11139.1539-43D813.19
pancreas, neonate N16.CNhs11136.787-43B66.32
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E616.93
pituitary gland, embryo E13.CNhs11009.370-44C714.10
pituitary gland, embryo E14.CNhs11037.398-44A518.65
pituitary gland, embryo E15.CNhs10592.427-16B914.54
pituitary gland, embryo E16.CNhs11036.449-43F620.33
pituitary gland, embryo E17.CNhs11039.1265-44F519.25
pituitary gland, neonate N00.CNhs11190.1308-22E916.44
placenta, adult pregnant day10.CNhs10472.539-13I76.57
placenta, adult pregnant day17.CNhs10464.577-18G35.08
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C36.43
skin, neonate N00.CNhs11124.650-25G415.02
skin, neonate N03.CNhs11215.662-22H310.37
skin, neonate N06.CNhs11097.693-20I511.10
skin, neonate N10.CNhs11108.762-6C49.52
small intestine, neonate N16.CNhs11114.790-21I110.20
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C121.05
spleen, embryo E18.CNhs11011.1271-21F29.63
spleen, neonate N10.CNhs11116.752-24D14.14
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E314.39
stomach, embryo E15.CNhs10603.1252-16G813.01
stomach, embryo E16.CNhs11022.459-17D414.04
stomach, embryo E17.CNhs11006.1035-18D511.08
stomach, embryo E18.CNhs10999.1286-20C610.48
stomach, neonate N03.CNhs11193.1340-24B811.87
stomach, neonate N07.CNhs11210.718-18A911.08
stomach, neonate N25.CNhs11104.1355-25E46.28
stomach, neonate N30.CNhs11134.1386-42I18.04
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F514.05
testis, embryo E15.CNhs11034.443-27C513.40
testis, embryo E16.CNhs11033.470-26G516.53
testis, embryo E17.CNhs11029.486-18I514.21
testis, embryo E18.CNhs11027.503-18G512.00
testis, neonate N00.CNhs11189.1300-22B714.32
testis, neonate N07.CNhs11222.726-26I48.59
testis, neonate N10.CNhs11204.763-44D95.56
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I412.97
thymus, embryo E15.CNhs11005.430-45I28.53
thymus, embryo E16.CNhs11002.456-26C52.99
thymus, embryo E17.CNhs10581.478-18C15.91
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D31.45
thymus, neonate N10.CNhs11194.748-24E41.21
thymus, neonate N20.CNhs11186.820-7A21.36
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.70
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.68
urinary bladder, adult.CNhs10481.879-12E48.50
uterus, adult pregnant day19.CNhs10497.590-15F57.51
uterus, adult.CNhs10509.92-27E56.59
vagina, adult.CNhs10502.89-27D56.00
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I87.37
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H210.07
whole body, embryo E14.5.CNhs10578.420-27D212.88
whole body, embryo E14.CNhs10519.395-14B14.82
whole body, embryo E16.CNhs10514.453-14F24.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.02
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.10
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.62
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.24
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.92
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.94
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.35
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.91
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.80
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.86
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G513.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.61
whole body, embryo E17.5.CNhs10513.490-9F912.35
whole body, embryo E17.CNhs10517.475-3I59.99
whole body, embryo E18.CNhs10516.493-3B38.66
whole body, neonate N00.CNhs10525.657-19C210.53
whole body, neonate N01.CNhs10576.659-23C612.24
whole body, neonate N06.CNhs10515.692-21D17.94
whole body, neonate N10.CNhs10518.761-6B47.88





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
lung5.91e-0914
respiratory tube5.91e-0914
respiration organ5.91e-0914
pair of lungs5.91e-0914
lung primordium5.91e-0914
lung bud5.91e-0914
primary circulatory organ7.38e-0918
heart7.38e-0918
primitive heart tube7.38e-0918
primary heart field7.38e-0918
anterior lateral plate mesoderm7.38e-0918
heart tube7.38e-0918
heart primordium7.38e-0918
cardiac mesoderm7.38e-0918
cardiogenic plate7.38e-0918
heart rudiment7.38e-0918
trunk region element2.99e-0879
cardiovascular system4.45e-0823
circulatory system4.45e-0823
thoracic cavity element4.59e-0717
thoracic segment organ4.59e-0717
thoracic cavity4.59e-0717
thoracic segment of trunk4.59e-0717
respiratory primordium4.59e-0717
endoderm of foregut4.59e-0717
trunk6.19e-0790
epithelial bud6.64e-0717
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