FFCP PHASE1:Mm9::chr3:54719789..54719806,-: Difference between revisions
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{{FFCP|EntrezGene=329641|HGNC=|MCL_coexpression_id=708|UniProt=Q8CD78|association_with_transcript=2bp_to_ENSMUST00000070342,NM_177854,uc008pfx.2_5end|description=CAGE_peak_1_at_6030405A18Rik_5end|id=chr3:54719789..54719806,-|ontology_enrichment_celltype=CL:0000117!2.69e-12!23;CL:0000337!2.69e-12!23;CL:0000540!2.85e-08!33;CL:0000047!2.85e-08!33;CL:0000031!2.85e-08!33;CL:0000404!2.85e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,9.63e-18,23;CL:0000337,9.63e-18,23;CL:0000540,4.49e-10,33;CL:0000047,4.49e-10,33;CL:0000031,4.49e-10,33;CL:0000404,4.49e-10,33;CL:0000393,1.79e-07,39;CL:0000211,1.79e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.06e-20!52;UBERON:0005068!1.06e-20!52;UBERON:0006241!1.06e-20!52;UBERON:0007135!1.06e-20!52;UBERON:0000955!5.22e-20!50;UBERON:0006238!5.22e-20!50;UBERON:0001017!1.05e-19!73;UBERON:0005743!1.05e-19!73;UBERON:0002616!1.64e-19!49;UBERON:0000073!2.23e-19!75;UBERON:0001016!2.23e-19!75;UBERON:0003080!4.94e-19!40;UBERON:0002780!1.73e-18!39;UBERON:0001890!1.73e-18!39;UBERON:0006240!1.73e-18!39;UBERON:0002020!5.00e-18!34;UBERON:0000033!2.59e-17!63;UBERON:0003056!9.96e-17!49;UBERON:0002346!5.53e-15!71;UBERON:0003075!5.53e-15!71;UBERON:0007284!5.53e-15!71;UBERON:0002791!6.27e-15!29;UBERON:0003528!6.27e-15!29;UBERON:0001893!6.27e-15!29;UBERON:0004121!1.93e-12!102;UBERON:0000924!1.93e-12!102;UBERON:0006601!1.93e-12!102;UBERON:0000956!2.75e-10!21;UBERON:0001869!2.75e-10!21;UBERON:0000203!2.75e-10!21;UBERON:0002619!7.46e-10!17;UBERON:0002021!9.97e-09!10;UBERON:0000411!9.97e-09!10;UBERON:0001950!9.97e-09!10;UBERON:0000025!2.34e-08!114;UBERON:0007811!1.02e-07!86;UBERON:0004111!3.62e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.67e-28,54;UBERON:0002020,6.09e-26,34;UBERON:0003080,2.23e-24,40;UBERON:0001049,2.80e-24,52;UBERON:0005068,2.80e-24,52;UBERON:0006241,2.80e-24,52;UBERON:0007135,2.80e-24,52;UBERON:0002780,1.36e-23,39;UBERON:0001890,1.36e-23,39;UBERON:0006240,1.36e-23,39;UBERON:0001017,1.93e-21,73;UBERON:0003528,2.21e-21,29;UBERON:0002791,2.21e-21,29;UBERON:0001893,2.21e-21,29;UBERON:0000955,2.47e-21,47;UBERON:0006238,2.47e-21,47;UBERON:0002616,1.19e-20,46;UBERON:0001016,1.99e-20,75;UBERON:0003056,1.36e-17,49;UBERON:0002346,4.90e-17,64;UBERON:0003075,4.90e-17,64;UBERON:0007284,4.90e-17,64;UBERON:0000956,1.48e-14,21;UBERON:0001869,1.48e-14,21;UBERON:0000203,1.48e-14,21;UBERON:0010371,3.87e-14,73;UBERON:0004121,1.43e-13,95;UBERON:0000924,1.43e-13,95;UBERON:0006601,1.43e-13,95;UBERON:0002619,1.73e-13,17;UBERON:0002021,4.56e-12,10;UBERON:0000411,4.56e-12,10;UBERON:0001950,4.56e-12,10;UBERON:0010314,1.40e-09,92;UBERON:0000025,5.24e-09,114;UBERON:0002420,4.82e-08,8;UBERON:0007245,4.82e-08,8;UBERON:0010009,4.82e-08,8;UBERON:0010011,4.82e-08,8;UBERON:0000454,4.82e-08,8;UBERON:0004111,4.90e-08,122;UBERON:0011216,4.16e-07,194|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,3.84401275633236,3.70293685490423,1.90149421051854,0.338844532069132,0,0,0.988866362566974,0,0.599200221036809,0,1.55534418462716,2.29510095163874,0,2.57085885963423,6.18431914664518,2.57230678351403,2.01275489138296,1.83843757322004,7.70811166995721,5.2351808614927,3.84016333140609,4.87979264601717,4.48289453651807,4.16730696445408,3.62937898701795,1.68828783009504,6.72312290217964,5.30331453852602,4.12877874317399,2.98239113320481,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,1.83096445709685,0,0,0,0,0,0,0.22836775943812,0,0,0,0.304465478312141,0.230615497256059,0,0.352766121407114,0,0,0,0,0,0,0,1.86391761218122,0,0.209446706813455,1.27728527604296,0,0,0,2.84602214869163,3.20250421973039,3.14135880282161,6.95297280769106,9.46147192122223,3.32460871295296,5.19172041816825,0.101839363850316,0,0,0,0.130120442962704,0.689706313300419,0.540186389416048,0.150704817835715,0.0680364991513279,0.2562274405697,0.0937017245597288,0.258703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0.657587197282725,0,0,0,0.995171334092466,0,0,0,1.03562886267751,0.703578179943289,0.900310307305074,0.946978942340841,0.393528463494808,0.617068451549513,0.930135779001631,1.07309360559848,0.233530684734339,0.329119699826961,0.164167464079095,0.243206428637567,0.146199987425332,0.439100230582101,0.402619256281115,20.6084149592845,26.2406761567175,0.330418782983798,0.793351699990633,0.213288250535234,0.696710015581316,0.902072229254653,2.21851877085677,2.2237804384487,2.28270751335071,4.74529061544512,1.81168850196412,2.76468729680296,4.17808591286417,3.11942539390592,0.898819408654221,1.72910439899755,1.39398891278057,0.379335801906163,0.342745537829186,0,0,0,0,0,0,0,0,0,3.67059232575407,3.53806191203765,2.9232074610031,2.02860121388503,3.61765739628625,2.29163266603278,3.45235364940973,0.972811360650212,0,0,0,0,0,0,0,0,0.568474235311454,0.325929952884052,0.16974508577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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:329641 | |||
|HGNC= | |||
|MCL_coexpression_id=708 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8CD78 | |||
|association_with_transcript=2bp_to_ENSMUST00000070342,NM_177854,uc008pfx.2_5end | |||
|cluster_id=chr3:54719789..54719806,- | |||
|description=CAGE_peak_1_at_6030405A18Rik_5end | |||
|id=chr3:54719789..54719806,- | |||
|ontology_enrichment_celltype=CL:0000117!2.69e-12!23;CL:0000337!2.69e-12!23;CL:0000540!2.85e-08!33;CL:0000047!2.85e-08!33;CL:0000031!2.85e-08!33;CL:0000404!2.85e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.63e-18,23;CL:0000337,9.63e-18,23;CL:0000540,4.49e-10,33;CL:0000047,4.49e-10,33;CL:0000031,4.49e-10,33;CL:0000404,4.49e-10,33;CL:0000393,1.79e-07,39;CL:0000211,1.79e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.06e-20!52;UBERON:0005068!1.06e-20!52;UBERON:0006241!1.06e-20!52;UBERON:0007135!1.06e-20!52;UBERON:0000955!5.22e-20!50;UBERON:0006238!5.22e-20!50;UBERON:0001017!1.05e-19!73;UBERON:0005743!1.05e-19!73;UBERON:0002616!1.64e-19!49;UBERON:0000073!2.23e-19!75;UBERON:0001016!2.23e-19!75;UBERON:0003080!4.94e-19!40;UBERON:0002780!1.73e-18!39;UBERON:0001890!1.73e-18!39;UBERON:0006240!1.73e-18!39;UBERON:0002020!5.00e-18!34;UBERON:0000033!2.59e-17!63;UBERON:0003056!9.96e-17!49;UBERON:0002346!5.53e-15!71;UBERON:0003075!5.53e-15!71;UBERON:0007284!5.53e-15!71;UBERON:0002791!6.27e-15!29;UBERON:0003528!6.27e-15!29;UBERON:0001893!6.27e-15!29;UBERON:0004121!1.93e-12!102;UBERON:0000924!1.93e-12!102;UBERON:0006601!1.93e-12!102;UBERON:0000956!2.75e-10!21;UBERON:0001869!2.75e-10!21;UBERON:0000203!2.75e-10!21;UBERON:0002619!7.46e-10!17;UBERON:0002021!9.97e-09!10;UBERON:0000411!9.97e-09!10;UBERON:0001950!9.97e-09!10;UBERON:0000025!2.34e-08!114;UBERON:0007811!1.02e-07!86;UBERON:0004111!3.62e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.67e-28,54;UBERON:0002020,6.09e-26,34;UBERON:0003080,2.23e-24,40;UBERON:0001049,2.80e-24,52;UBERON:0005068,2.80e-24,52;UBERON:0006241,2.80e-24,52;UBERON:0007135,2.80e-24,52;UBERON:0002780,1.36e-23,39;UBERON:0001890,1.36e-23,39;UBERON:0006240,1.36e-23,39;UBERON:0001017,1.93e-21,73;UBERON:0003528,2.21e-21,29;UBERON:0002791,2.21e-21,29;UBERON:0001893,2.21e-21,29;UBERON:0000955,2.47e-21,47;UBERON:0006238,2.47e-21,47;UBERON:0002616,1.19e-20,46;UBERON:0001016,1.99e-20,75;UBERON:0003056,1.36e-17,49;UBERON:0002346,4.90e-17,64;UBERON:0003075,4.90e-17,64;UBERON:0007284,4.90e-17,64;UBERON:0000956,1.48e-14,21;UBERON:0001869,1.48e-14,21;UBERON:0000203,1.48e-14,21;UBERON:0010371,3.87e-14,73;UBERON:0004121,1.43e-13,95;UBERON:0000924,1.43e-13,95;UBERON:0006601,1.43e-13,95;UBERON:0002619,1.73e-13,17;UBERON:0002021,4.56e-12,10;UBERON:0000411,4.56e-12,10;UBERON:0001950,4.56e-12,10;UBERON:0010314,1.40e-09,92;UBERON:0000025,5.24e-09,114;UBERON:0002420,4.82e-08,8;UBERON:0007245,4.82e-08,8;UBERON:0010009,4.82e-08,8;UBERON:0010011,4.82e-08,8;UBERON:0000454,4.82e-08,8;UBERON:0004111,4.90e-08,122;UBERON:0011216,4.16e-07,194 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,3.84401275633236,3.70293685490423,1.90149421051854,0.338844532069132,0,0,0.988866362566974,0,0.599200221036809,0,1.55534418462716,2.29510095163874,0,2.57085885963423,6.18431914664518,2.57230678351403,2.01275489138296,1.83843757322004,7.70811166995721,5.2351808614927,3.84016333140609,4.87979264601717,4.48289453651807,4.16730696445408,3.62937898701795,1.68828783009504,6.72312290217964,5.30331453852602,4.12877874317399,2.98239113320481,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,1.83096445709685,0,0,0,0,0,0,0.22836775943812,0,0,0,0.304465478312141,0.230615497256059,0,0.352766121407114,0,0,0,0,0,0,0,1.86391761218122,0,0.209446706813455,1.27728527604296,0,0,0,2.84602214869163,3.20250421973039,3.14135880282161,6.95297280769106,9.46147192122223,3.32460871295296,5.19172041816825,0.101839363850316,0,0,0,0.130120442962704,0.689706313300419,0.540186389416048,0.150704817835715,0.0680364991513279,0.2562274405697,0.0937017245597288,0.258703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0.657587197282725,0,0,0,0.995171334092466,0,0,0,1.03562886267751,0.703578179943289,0.900310307305074,0.946978942340841,0.393528463494808,0.617068451549513,0.930135779001631,1.07309360559848,0.233530684734339,0.329119699826961,0.164167464079095,0.243206428637567,0.146199987425332,0.439100230582101,0.402619256281115,20.6084149592845,26.2406761567175,0.330418782983798,0.793351699990633,0.213288250535234,0.696710015581316,0.902072229254653,2.21851877085677,2.2237804384487,2.28270751335071,4.74529061544512,1.81168850196412,2.76468729680296,4.17808591286417,3.11942539390592,0.898819408654221,1.72910439899755,1.39398891278057,0.379335801906163,0.342745537829186,0,0,0,0,0,0,0,0,0,3.67059232575407,3.53806191203765,2.9232074610031,2.02860121388503,3.61765739628625,2.29163266603278,3.45235364940973,0.972811360650212,0,0,0,0,0,0,0,0,0.568474235311454,0.325929952884052,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,1.17211686592203,0,0,0.631016438832513,0,0,0.716906393857656,0.222798674082394,0.283076530788832,0,0,0,2.24924921495265,0,0,0.162886959353576,0,0,0.485561272309963,0.604647113929502,0,0,0,0.258428293168221,0,0,0,0,0,1.02131881726136,0.720244376125241,0.388076051348264,0.857348140126369,1.77340233642274,3.21063871683727,3.1264313914403,3.34911444026059,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,1.45740418314925,0.741701208042039,0,0,0,0,0,0,0,0,0,0.954670618015114,0.632671987162271,0,0.108005340821801,0,0,0.404593039154462,0.165306911450672,0,0,0,0,1.34564891439581,2.15096037594227,1.75006069509643,1.42075805825504,0.675824501963113,0.469428954583016,0.2604087696879,0.104859344425711,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0.443971906748129,0,0.335769232728157,0,0,0,0,0,7.34177395402186,4.14292712856459,9.73922372846974,8.76451229952807,15.7568979547248,8.3093328712867,11.4753825039407,7.65546045481175,7.70342095273148,7.24864436452548,1.24544817101012,1.59609949360412,1.70733605754134,0.729320151204882,2.30574478890781,1.65459157605013,0.666740183404846,1.23621034343337,1.28367683836726,1.76888048234658,1.52087579934144,2.26351609663291,1.12369808963859,0.512201219238954,1.03383844120104,0.952587382566147,0.463537303779422,1.54327376370964,2.06042950401653,1.76638704161277,1.02860775715625,0.887379030796687,1.43061713968393,0.726732083161643,1.50575008664529,1.4384483341585,1.09756783723664,1.31534855718921,1.22223702461276,1.12228454331548,0.830445126869219,1.37906275325789,0.818462086339379,0.464810523557898,1.15743966588685,2.74791635731741,0.935726433781634,1.50409737833809,0.191288332068843,0,0.231867835620421 | |||
|short_description=p1@6030405A18Rik | |||
}} |
Revision as of 21:04, 3 August 2015
Short description: | p1@6030405A18Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_6030405A18Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:708 |
Association with transcript: | 2bp_to_ENSMUST00000070342, NM_177854, uc008pfx.2_5end |
EntrezGene: | 329641 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.63e-18 | 23 |
neuroblast (sensu Vertebrata) | 9.63e-18 | 23 |
neuron | 4.49e-10 | 33 |
neuronal stem cell | 4.49e-10 | 33 |
neuroblast | 4.49e-10 | 33 |
electrically signaling cell | 4.49e-10 | 33 |
electrically responsive cell | 1.79e-07 | 39 |
electrically active cell | 1.79e-07 | 39 |