FFCP PHASE1:Mm9::chr16:45409045..45409063,-: Difference between revisions
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{{FFCP|EntrezGene=17470|HGNC=|MCL_coexpression_id=13|UniProt=Q05D16|association_with_transcript=-19bp_to_ENSMUST00000166512_5end|description=CAGE_peak_2_at_Cd200_5end|id=chr16:45409045..45409063,-|ontology_enrichment_celltype=CL:0000117!1.95e-14!23;CL:0000337!1.95e-14!23;CL:0000540!3.14e-12!33;CL:0000047!3.14e-12!33;CL:0000031!3.14e-12!33;CL:0000404!3.14e-12!33;CL:0000393!9.35e-12!39;CL:0000211!9.35e-12!39;CL:0000221!6.72e-11!44;CL:0000133!6.72e-11!44;CL:0000055!1.43e-10!50;CL:0002319!1.48e-10!43|ontology_enrichment_celltype_v019_2=CL:0000117,3.68e-17,23;CL:0000337,3.68e-17,23;CL:0000540,7.38e-13,33;CL:0000047,7.38e-13,33;CL:0000031,7.38e-13,33;CL:0000404,7.38e-13,33;CL:0000393,2.48e-11,39;CL:0000211,2.48e-11,39;CL:0000221,7.54e-11,44;CL:0000133,7.54e-11,44;CL:0002319,1.88e-10,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!9.31e-23!75;UBERON:0001016!9.31e-23!75;UBERON:0001017!4.86e-22!73;UBERON:0005743!4.86e-22!73;UBERON:0001049!6.09e-20!52;UBERON:0005068!6.09e-20!52;UBERON:0006241!6.09e-20!52;UBERON:0007135!6.09e-20!52;UBERON:0004121!2.59e-19!102;UBERON:0000924!2.59e-19!102;UBERON:0006601!2.59e-19!102;UBERON:0002346!7.73e-19!71;UBERON:0003075!7.73e-19!71;UBERON:0007284!7.73e-19!71;UBERON:0000033!3.79e-18!63;UBERON:0000955!4.05e-18!50;UBERON:0006238!4.05e-18!50;UBERON:0002020!7.85e-18!34;UBERON:0002616!1.10e-17!49;UBERON:0003056!2.39e-15!49;UBERON:0003080!4.35e-15!40;UBERON:0002780!1.72e-14!39;UBERON:0001890!1.72e-14!39;UBERON:0006240!1.72e-14!39;UBERON:0002791!2.39e-14!29;UBERON:0003528!2.39e-14!29;UBERON:0001893!2.39e-14!29;UBERON:0007811!3.40e-10!86;UBERON:0000956!2.89e-09!21;UBERON:0001869!2.89e-09!21;UBERON:0000203!2.89e-09!21;UBERON:0000153!3.65e-09!94;UBERON:0000468!3.81e-08!333;UBERON:0002619!6.24e-08!17;UBERON:0000479!5.42e-07!349|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.60e-23,75;UBERON:0000073,4.51e-23,54;UBERON:0001017,1.11e-22,73;UBERON:0002346,6.22e-22,64;UBERON:0003075,6.22e-22,64;UBERON:0007284,6.22e-22,64;UBERON:0001049,1.34e-21,52;UBERON:0005068,1.34e-21,52;UBERON:0006241,1.34e-21,52;UBERON:0007135,1.34e-21,52;UBERON:0004121,1.72e-20,95;UBERON:0000924,1.72e-20,95;UBERON:0006601,1.72e-20,95;UBERON:0002020,2.91e-20,34;UBERON:0010371,7.13e-18,73;UBERON:0000955,2.11e-17,47;UBERON:0006238,2.11e-17,47;UBERON:0002616,6.69e-17,46;UBERON:0003056,2.88e-16,49;UBERON:0003528,4.37e-16,29;UBERON:0002791,4.37e-16,29;UBERON:0001893,4.37e-16,29;UBERON:0003080,8.81e-16,40;UBERON:0002780,4.39e-15,39;UBERON:0001890,4.39e-15,39;UBERON:0006240,4.39e-15,39;UBERON:0010314,9.49e-14,92;UBERON:0000956,5.01e-10,21;UBERON:0001869,5.01e-10,21;UBERON:0000203,5.01e-10,21;UBERON:0002619,2.07e-08,17;UBERON:0002420,1.26e-07,8;UBERON:0007245,1.26e-07,8;UBERON:0010009,1.26e-07,8;UBERON:0010011,1.26e-07,8;UBERON:0000454,1.26e-07,8;UBERON:0002021,1.86e-07,10;UBERON:0000411,1.86e-07,10;UBERON:0001950,1.86e-07,10;UBERON:0000025,2.90e-07,114|phase1_expression=0.960893082628764,0,0,0,0,0,0,2.58246646883153,1.40788722151667,3.27690336850791,1.02730780935303,3.58974715479014,0.171200729931206,0.437102012094987,0.333109761815663,0.404950534779652,0,2.36596624018678,2.05671650408608,2.12194825899015,1.87095238332354,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0.251793635951155,0.709638518536602,0.550640256485045,1.56478268869608,0.218025156380447,0.439372365468944,0.777719596297134,0.699932108126813,0,0.335565212115473,0,0,12.0911934936895,0.573066879877513,6.70373719960675,17.3992156339254,23.8045940672415,14.5781222806421,0,0,0,0.988866362566974,0.7104801149461,1.19840044207362,1.53687322128622,3.00699875694585,2.70011876663381,3.99617426567626,19.9955689082663,17.0068776532742,6.49201235839256,4.98396449294829,5.51531271966013,7.70811166995721,10.5980490610706,9.67721159514334,20.1786020227197,24.0612502674337,25.0038417867245,10.8881369610539,15.1945904708554,12.9878510610289,19.4454866412621,21.0710087582672,24.2319279572891,2.80186915332781,3.47629176491213,0.289864488701678,1.72084775396277,0,0,0,0,1.12355536105401,0.511290967734173,0.519572009205738,0.70667914902068,3.52108549441701,0,0,0,0,0,0,0.34255163915718,2.84831672011889,0.742210695324124,0.346970653532272,0.608930956624282,0.922461989024234,1.05505848386836,1.52865319276416,0.251333182659351,0,2.74738778147832,0.884610551949874,1.29413479957927,1.54589062922275,0,0,1.46390398505774,4.1889341362691,0.510914110417183,0,0,0.127070227073065,11.833460512981,8.6925114535539,17.9685723521396,7.82209440865244,8.18289463457058,8.72709787150152,7.13861557498134,1.01839363850316,0.870848794270651,0.758168275301024,0.210441855886474,0.260240885925407,2.29902104433473,1.62055916824814,2.71268672104287,3.33378845841506,3.45907044769094,3.5606655332697,1.55222022443409,0.215567992932842,0.378212160335639,0.351902248327898,0.43839146485515,0.556094498451196,0.348252166522167,0.823128545631774,0.796137067273973,0,0,0,0.207125772535502,0,0.180062061461015,0.710234206755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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17470 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q05D16 | |||
|association_with_transcript=-19bp_to_ENSMUST00000166512_5end | |||
|cluster_id=chr16:45409045..45409063,- | |||
|description=CAGE_peak_2_at_Cd200_5end | |||
|id=chr16:45409045..45409063,- | |||
|ontology_enrichment_celltype=CL:0000117!1.95e-14!23;CL:0000337!1.95e-14!23;CL:0000540!3.14e-12!33;CL:0000047!3.14e-12!33;CL:0000031!3.14e-12!33;CL:0000404!3.14e-12!33;CL:0000393!9.35e-12!39;CL:0000211!9.35e-12!39;CL:0000221!6.72e-11!44;CL:0000133!6.72e-11!44;CL:0000055!1.43e-10!50;CL:0002319!1.48e-10!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.68e-17,23;CL:0000337,3.68e-17,23;CL:0000540,7.38e-13,33;CL:0000047,7.38e-13,33;CL:0000031,7.38e-13,33;CL:0000404,7.38e-13,33;CL:0000393,2.48e-11,39;CL:0000211,2.48e-11,39;CL:0000221,7.54e-11,44;CL:0000133,7.54e-11,44;CL:0002319,1.88e-10,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.31e-23!75;UBERON:0001016!9.31e-23!75;UBERON:0001017!4.86e-22!73;UBERON:0005743!4.86e-22!73;UBERON:0001049!6.09e-20!52;UBERON:0005068!6.09e-20!52;UBERON:0006241!6.09e-20!52;UBERON:0007135!6.09e-20!52;UBERON:0004121!2.59e-19!102;UBERON:0000924!2.59e-19!102;UBERON:0006601!2.59e-19!102;UBERON:0002346!7.73e-19!71;UBERON:0003075!7.73e-19!71;UBERON:0007284!7.73e-19!71;UBERON:0000033!3.79e-18!63;UBERON:0000955!4.05e-18!50;UBERON:0006238!4.05e-18!50;UBERON:0002020!7.85e-18!34;UBERON:0002616!1.10e-17!49;UBERON:0003056!2.39e-15!49;UBERON:0003080!4.35e-15!40;UBERON:0002780!1.72e-14!39;UBERON:0001890!1.72e-14!39;UBERON:0006240!1.72e-14!39;UBERON:0002791!2.39e-14!29;UBERON:0003528!2.39e-14!29;UBERON:0001893!2.39e-14!29;UBERON:0007811!3.40e-10!86;UBERON:0000956!2.89e-09!21;UBERON:0001869!2.89e-09!21;UBERON:0000203!2.89e-09!21;UBERON:0000153!3.65e-09!94;UBERON:0000468!3.81e-08!333;UBERON:0002619!6.24e-08!17;UBERON:0000479!5.42e-07!349 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.60e-23,75;UBERON:0000073,4.51e-23,54;UBERON:0001017,1.11e-22,73;UBERON:0002346,6.22e-22,64;UBERON:0003075,6.22e-22,64;UBERON:0007284,6.22e-22,64;UBERON:0001049,1.34e-21,52;UBERON:0005068,1.34e-21,52;UBERON:0006241,1.34e-21,52;UBERON:0007135,1.34e-21,52;UBERON:0004121,1.72e-20,95;UBERON:0000924,1.72e-20,95;UBERON:0006601,1.72e-20,95;UBERON:0002020,2.91e-20,34;UBERON:0010371,7.13e-18,73;UBERON:0000955,2.11e-17,47;UBERON:0006238,2.11e-17,47;UBERON:0002616,6.69e-17,46;UBERON:0003056,2.88e-16,49;UBERON:0003528,4.37e-16,29;UBERON:0002791,4.37e-16,29;UBERON:0001893,4.37e-16,29;UBERON:0003080,8.81e-16,40;UBERON:0002780,4.39e-15,39;UBERON:0001890,4.39e-15,39;UBERON:0006240,4.39e-15,39;UBERON:0010314,9.49e-14,92;UBERON:0000956,5.01e-10,21;UBERON:0001869,5.01e-10,21;UBERON:0000203,5.01e-10,21;UBERON:0002619,2.07e-08,17;UBERON:0002420,1.26e-07,8;UBERON:0007245,1.26e-07,8;UBERON:0010009,1.26e-07,8;UBERON:0010011,1.26e-07,8;UBERON:0000454,1.26e-07,8;UBERON:0002021,1.86e-07,10;UBERON:0000411,1.86e-07,10;UBERON:0001950,1.86e-07,10;UBERON:0000025,2.90e-07,114 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,2.58246646883153,1.40788722151667,3.27690336850791,1.02730780935303,3.58974715479014,0.171200729931206,0.437102012094987,0.333109761815663,0.404950534779652,0,2.36596624018678,2.05671650408608,2.12194825899015,1.87095238332354,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0.251793635951155,0.709638518536602,0.550640256485045,1.56478268869608,0.218025156380447,0.439372365468944,0.777719596297134,0.699932108126813,0,0.335565212115473,0,0,12.0911934936895,0.573066879877513,6.70373719960675,17.3992156339254,23.8045940672415,14.5781222806421,0,0,0,0.988866362566974,0.7104801149461,1.19840044207362,1.53687322128622,3.00699875694585,2.70011876663381,3.99617426567626,19.9955689082663,17.0068776532742,6.49201235839256,4.98396449294829,5.51531271966013,7.70811166995721,10.5980490610706,9.67721159514334,20.1786020227197,24.0612502674337,25.0038417867245,10.8881369610539,15.1945904708554,12.9878510610289,19.4454866412621,21.0710087582672,24.2319279572891,2.80186915332781,3.47629176491213,0.289864488701678,1.72084775396277,0,0,0,0,1.12355536105401,0.511290967734173,0.519572009205738,0.70667914902068,3.52108549441701,0,0,0,0,0,0,0.34255163915718,2.84831672011889,0.742210695324124,0.346970653532272,0.608930956624282,0.922461989024234,1.05505848386836,1.52865319276416,0.251333182659351,0,2.74738778147832,0.884610551949874,1.29413479957927,1.54589062922275,0,0,1.46390398505774,4.1889341362691,0.510914110417183,0,0,0.127070227073065,11.833460512981,8.6925114535539,17.9685723521396,7.82209440865244,8.18289463457058,8.72709787150152,7.13861557498134,1.01839363850316,0.870848794270651,0.758168275301024,0.210441855886474,0.260240885925407,2.29902104433473,1.62055916824814,2.71268672104287,3.33378845841506,3.45907044769094,3.5606655332697,1.55222022443409,0.215567992932842,0.378212160335639,0.351902248327898,0.43839146485515,0.556094498451196,0.348252166522167,0.823128545631774,0.796137067273973,0,0,0,0.207125772535502,0,0.180062061461015,0.710234206755631,0,0.154267112887378,0.232533944750408,0.536546802799238,0.467061369468678,0.493679549740441,0.985004784474571,1.29710095273369,1.46199987425332,1.53685080703735,1.07365135008297,5.25724871410318,13.6863134464448,0,0,0.426576501070468,0.464473343720877,0.77320476793256,0.403367049246685,0.22237804384487,0.380451252225118,0.474529061544512,0.823494773620054,1.50801125280162,0.994782360205754,0.58489226135736,0.898819408654221,0,0.398282546508734,0.569003702859245,0.342745537829186,0,0.407302655690628,0.193952487167626,0.420814919341911,0.442655759869801,0.295220295959204,0.31399745568275,0.616985819609003,0,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,3.69506380333209,0.189491411770485,0.651859905768103,0.339490171550376,0.469380496577004,0.837531287209079,1.90434912708811,2.53673742215138,2.83743259391144,1.55025282754142,1.75400245523236,2.13022309130459,3.10832967358612,3.18227928879325,0,0,0.491764273019036,0.551873492609465,7.06422595946285,7.14991288212439,0.163934945376675,0.252470927204373,0.631016438832513,2.34263246577983,2.36965737506079,0.716906393857656,1.11399337041197,0.283076530788832,1.21443210502468,1.16902343164525,1.18586333383957,3.85585579706168,1.13552068166615,1.24645922567079,1.79175655288934,2.14461159864296,1.32745138339963,0.242780636154981,1.51161778482376,0.188605079755898,0,0.614870295887855,1.29214146584111,0.727067458955011,0.356497378384721,0.316036757935816,0,1.03135543248187,1.70219802876894,0.540183282093931,0.776152102696527,1.50035924522115,1.59606210278046,0.535106452806212,1.64549020602121,2.13125464380219,0,0,0.441056796109924,0.16488625294148,0.484393280087717,0.482503399425247,1.07435109602823,0.164140899745061,0.291480836629851,7.78786268444141,0.341741761595705,1.44470807574256,0.740778109478847,0.188368457004691,0.410082683163076,0.686334519619568,0,0,0,0.954670618015114,0.316335993581135,1.42323626988794,0.86404272657441,0.627264888043406,0.655087691238533,0.944050424693745,0.495920734352016,0.26175594198403,0.259229946583586,1.24267862617385,0,1.34564891439581,0.496375471371293,2.13896307178452,1.03327858782185,2.70329800785245,2.8165737274981,2.3436789271911,1.57289016638566,0.724752362478018,0,0,0.608175645870493,0.102710957164827,0.51968329191118,0.179026695667481,0.39736270956253,0.360586348559907,0.590758108698309,0,0.15241361331,0.302478555410522,0.0974578807397524,0.288635524920988,0.350630706544707,0.226730383615211,0,0,0,1.54551675225752,0.375364950902364,1.09890974560359,0.643105137237198,0,16.3778034358949,13.8097570952153,12.0308057822273,8.42080593484069,6.16574267793578,3.7769694869485,6.07520250208625,4.5032120322422,4.98456649882625,4.65984280576638,0.31136204275253,2.39414924040619,3.07320490357441,2.18796045361465,1.67690530102386,1.83843508450014,3.11145418922261,4.12070114477788,4.49286893428541,5.05394423527595,3.54871019846336,4.52703219326583,3.558377283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| |||
|short_description=p2@Cd200 | |||
}} |
Revision as of 20:49, 3 August 2015
Short description: | p2@Cd200 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cd200_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -19bp_to_ENSMUST00000166512_5end |
EntrezGene: | 17470 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.68e-17 | 23 |
neuroblast (sensu Vertebrata) | 3.68e-17 | 23 |
neuron | 7.38e-13 | 33 |
neuronal stem cell | 7.38e-13 | 33 |
neuroblast | 7.38e-13 | 33 |
electrically signaling cell | 7.38e-13 | 33 |
electrically responsive cell | 2.48e-11 | 39 |
electrically active cell | 2.48e-11 | 39 |
ectodermal cell | 7.54e-11 | 44 |
neurectodermal cell | 7.54e-11 | 44 |
neural cell | 1.88e-10 | 43 |