FFCP PHASE1:Mm9::chr11:69651238..69651266,-: Difference between revisions
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{{FFCP|EntrezGene=216856|HGNC=|MCL_coexpression_id=13|UniProt=Q69ZK9|association_with_transcript=19bp_to_ENSMUST00000108634,uc007jrx.1_5end|description=CAGE_peak_1_at_Nlgn2_5end|id=chr11:69651238..69651266,-|ontology_enrichment_celltype=CL:0002319!1.71e-18!43;CL:0000221!2.39e-18!44;CL:0000133!2.39e-18!44;CL:0000055!1.64e-16!50;CL:0000540!3.91e-16!33;CL:0000047!3.91e-16!33;CL:0000031!3.91e-16!33;CL:0000404!3.91e-16!33;CL:0000393!1.13e-14!39;CL:0000211!1.13e-14!39;CL:0000117!2.13e-13!23;CL:0000337!2.13e-13!23;CL:0002321!2.86e-07!70;CL:0000220!2.86e-07!70|ontology_enrichment_celltype_v019_2=CL:0002319,1.69e-18,43;CL:0000221,2.37e-18,44;CL:0000133,2.37e-18,44;CL:0000540,3.87e-16,33;CL:0000047,3.87e-16,33;CL:0000031,3.87e-16,33;CL:0000404,3.87e-16,33;CL:0000393,1.12e-14,39;CL:0000211,1.12e-14,39;CL:0000117,2.12e-13,23;CL:0000337,2.12e-13,23;CL:0002321,3.08e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.52e-37!73;UBERON:0005743!4.52e-37!73;UBERON:0000073!5.36e-36!75;UBERON:0001016!5.36e-36!75;UBERON:0004121!6.04e-33!102;UBERON:0000924!6.04e-33!102;UBERON:0006601!6.04e-33!102;UBERON:0002346!2.55e-27!71;UBERON:0003075!2.55e-27!71;UBERON:0007284!2.55e-27!71;UBERON:0001049!1.77e-26!52;UBERON:0005068!1.77e-26!52;UBERON:0006241!1.77e-26!52;UBERON:0007135!1.77e-26!52;UBERON:0000033!5.97e-25!63;UBERON:0000955!9.25e-25!50;UBERON:0006238!9.25e-25!50;UBERON:0002616!4.09e-24!49;UBERON:0003056!3.78e-21!49;UBERON:0002020!1.20e-19!34;UBERON:0003080!2.29e-19!40;UBERON:0002780!7.90e-19!39;UBERON:0001890!7.90e-19!39;UBERON:0006240!7.90e-19!39;UBERON:0002791!3.68e-16!29;UBERON:0003528!3.68e-16!29;UBERON:0001893!3.68e-16!29;UBERON:0000153!2.53e-13!94;UBERON:0007811!2.05e-12!86;UBERON:0000956!5.71e-12!21;UBERON:0001869!5.71e-12!21;UBERON:0000203!5.71e-12!21;UBERON:0002619!3.54e-10!17;UBERON:0003076!1.25e-07!12;UBERON:0003057!1.25e-07!12;UBERON:0002021!1.90e-07!10;UBERON:0000411!1.90e-07!10;UBERON:0001950!1.90e-07!10;UBERON:0000025!6.79e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.42e-37,73;UBERON:0001016,5.24e-36,75;UBERON:0004121,2.93e-34,95;UBERON:0000924,2.93e-34,95;UBERON:0006601,2.93e-34,95;UBERON:0002346,2.67e-29,64;UBERON:0003075,2.67e-29,64;UBERON:0007284,2.67e-29,64;UBERON:0000073,7.45e-28,54;UBERON:0010371,2.43e-27,73;UBERON:0001049,1.74e-26,52;UBERON:0005068,1.74e-26,52;UBERON:0006241,1.74e-26,52;UBERON:0007135,1.74e-26,52;UBERON:0000955,6.25e-23,47;UBERON:0006238,6.25e-23,47;UBERON:0002616,2.69e-22,46;UBERON:0003056,3.73e-21,49;UBERON:0002020,1.19e-19,34;UBERON:0003080,2.27e-19,40;UBERON:0002780,7.81e-19,39;UBERON:0001890,7.81e-19,39;UBERON:0006240,7.81e-19,39;UBERON:0010314,2.57e-18,92;UBERON:0003528,3.64e-16,29;UBERON:0002791,3.64e-16,29;UBERON:0001893,3.64e-16,29;UBERON:0000956,5.67e-12,21;UBERON:0001869,5.67e-12,21;UBERON:0000203,5.67e-12,21;UBERON:0002619,3.52e-10,17;UBERON:0003076,1.25e-07,12;UBERON:0003057,1.25e-07,12;UBERON:0002021,1.89e-07,10;UBERON:0000411,1.89e-07,10;UBERON:0001950,1.89e-07,10;UBERON:0000025,7.13e-07,114|phase1_expression=40.5176583175129,1.04692622291808,0.454999239389536,0.60492842261366,0,3.52546471014969,1.86890112476421,2.7115897922731,4.36445038670167,3.5109678948299,2.05461561870606,1.19658238493005,1.02720437958723,0.961624426608971,2.33176833270964,1.21485160433896,0.699561878128147,0.157731082679119,0,0,39.8853030808517,2.38298282882125,2.35079810225042,0.47997726838022,0.91763712426868,0.57423196411502,0.430761996159075,1.29282739611533,0.570070258369122,0.504060259519861,1.77384408524244,5.08024538767705,4.30545351309199,15.8481681015439,2.02196133825892,0.831173226792462,1.22501613757421,0,0,0,0,0.683045484958446,0,27.3196095007003,27.6759022229275,44.7854075274503,305.915015640083,36.8462514282955,63.4893068102624,61.6342780065478,67.7534280666755,60.3760770332881,0.167782606057736,0.725362142011344,1.34437519656986,15.9500850342287,20.9169411155292,13.9231464914909,186.738093373409,142.298573424177,191.417083858866,55.9093477914068,106.715375533337,13.9484456178617,5.93319817540185,12.7886420690298,129.127647633432,195.567117408671,79.9446910898363,81.0035629990144,72.3517867048754,253.943725134981,232.353705081097,97.3801853758885,89.0404425759416,113.983129539643,124.430945529309,192.041756480122,161.901286052081,173.298582077475,163.396931473904,152.627617573131,160.251041426793,127.18434986716,134.156861548039,202.704466805883,204.73047698911,173.35148461753,8.17842887998388,25.0897579554528,27.5371264266594,6.88339101585109,2.03991400112325,1.61910957491345,1.94932925234301,0.896053774194671,10.5333315098814,17.8951838706961,12.2099422163348,22.6137327686618,27.1827800168993,65.4465034813021,201.29613936825,163.545341725266,4.5463118612355,9.37431502257865,2.52762222507392,6.8510327831436,11.9111426477699,26.8680271707333,26.5432549952188,19.1813251336649,22.3697032338377,15.8258772580254,26.692636519805,14.8286577769017,9.88779870937496,9.68815691363408,4.42305275974937,19.4120219936891,11.48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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:216856 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q69ZK9 | |||
|association_with_transcript=19bp_to_ENSMUST00000108634,uc007jrx.1_5end | |||
|cluster_id=chr11:69651238..69651266,- | |||
|description=CAGE_peak_1_at_Nlgn2_5end | |||
|id=chr11:69651238..69651266,- | |||
|ontology_enrichment_celltype=CL:0002319!1.71e-18!43;CL:0000221!2.39e-18!44;CL:0000133!2.39e-18!44;CL:0000055!1.64e-16!50;CL:0000540!3.91e-16!33;CL:0000047!3.91e-16!33;CL:0000031!3.91e-16!33;CL:0000404!3.91e-16!33;CL:0000393!1.13e-14!39;CL:0000211!1.13e-14!39;CL:0000117!2.13e-13!23;CL:0000337!2.13e-13!23;CL:0002321!2.86e-07!70;CL:0000220!2.86e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.69e-18,43;CL:0000221,2.37e-18,44;CL:0000133,2.37e-18,44;CL:0000540,3.87e-16,33;CL:0000047,3.87e-16,33;CL:0000031,3.87e-16,33;CL:0000404,3.87e-16,33;CL:0000393,1.12e-14,39;CL:0000211,1.12e-14,39;CL:0000117,2.12e-13,23;CL:0000337,2.12e-13,23;CL:0002321,3.08e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.52e-37!73;UBERON:0005743!4.52e-37!73;UBERON:0000073!5.36e-36!75;UBERON:0001016!5.36e-36!75;UBERON:0004121!6.04e-33!102;UBERON:0000924!6.04e-33!102;UBERON:0006601!6.04e-33!102;UBERON:0002346!2.55e-27!71;UBERON:0003075!2.55e-27!71;UBERON:0007284!2.55e-27!71;UBERON:0001049!1.77e-26!52;UBERON:0005068!1.77e-26!52;UBERON:0006241!1.77e-26!52;UBERON:0007135!1.77e-26!52;UBERON:0000033!5.97e-25!63;UBERON:0000955!9.25e-25!50;UBERON:0006238!9.25e-25!50;UBERON:0002616!4.09e-24!49;UBERON:0003056!3.78e-21!49;UBERON:0002020!1.20e-19!34;UBERON:0003080!2.29e-19!40;UBERON:0002780!7.90e-19!39;UBERON:0001890!7.90e-19!39;UBERON:0006240!7.90e-19!39;UBERON:0002791!3.68e-16!29;UBERON:0003528!3.68e-16!29;UBERON:0001893!3.68e-16!29;UBERON:0000153!2.53e-13!94;UBERON:0007811!2.05e-12!86;UBERON:0000956!5.71e-12!21;UBERON:0001869!5.71e-12!21;UBERON:0000203!5.71e-12!21;UBERON:0002619!3.54e-10!17;UBERON:0003076!1.25e-07!12;UBERON:0003057!1.25e-07!12;UBERON:0002021!1.90e-07!10;UBERON:0000411!1.90e-07!10;UBERON:0001950!1.90e-07!10;UBERON:0000025!6.79e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.42e-37,73;UBERON:0001016,5.24e-36,75;UBERON:0004121,2.93e-34,95;UBERON:0000924,2.93e-34,95;UBERON:0006601,2.93e-34,95;UBERON:0002346,2.67e-29,64;UBERON:0003075,2.67e-29,64;UBERON:0007284,2.67e-29,64;UBERON:0000073,7.45e-28,54;UBERON:0010371,2.43e-27,73;UBERON:0001049,1.74e-26,52;UBERON:0005068,1.74e-26,52;UBERON:0006241,1.74e-26,52;UBERON:0007135,1.74e-26,52;UBERON:0000955,6.25e-23,47;UBERON:0006238,6.25e-23,47;UBERON:0002616,2.69e-22,46;UBERON:0003056,3.73e-21,49;UBERON:0002020,1.19e-19,34;UBERON:0003080,2.27e-19,40;UBERON:0002780,7.81e-19,39;UBERON:0001890,7.81e-19,39;UBERON:0006240,7.81e-19,39;UBERON:0010314,2.57e-18,92;UBERON:0003528,3.64e-16,29;UBERON:0002791,3.64e-16,29;UBERON:0001893,3.64e-16,29;UBERON:0000956,5.67e-12,21;UBERON:0001869,5.67e-12,21;UBERON:0000203,5.67e-12,21;UBERON:0002619,3.52e-10,17;UBERON:0003076,1.25e-07,12;UBERON:0003057,1.25e-07,12;UBERON:0002021,1.89e-07,10;UBERON:0000411,1.89e-07,10;UBERON:0001950,1.89e-07,10;UBERON:0000025,7.13e-07,114 | |||
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| |||
|short_description=p1@Nlgn2 | |||
}} |
Revision as of 19:44, 3 August 2015
Short description: | p1@Nlgn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nlgn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 19bp_to_ENSMUST00000108634, uc007jrx.1_5end |
EntrezGene: | 216856 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.69e-18 | 43 |
ectodermal cell | 2.37e-18 | 44 |
neurectodermal cell | 2.37e-18 | 44 |
neuron | 3.87e-16 | 33 |
neuronal stem cell | 3.87e-16 | 33 |
neuroblast | 3.87e-16 | 33 |
electrically signaling cell | 3.87e-16 | 33 |
electrically responsive cell | 1.12e-14 | 39 |
electrically active cell | 1.12e-14 | 39 |
CNS neuron (sensu Vertebrata) | 2.12e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.12e-13 | 23 |
embryonic cell | 3.08e-07 | 70 |