FFCP PHASE1:Mm9::chr11:69648167..69648177,-: Difference between revisions
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{{FFCP|EntrezGene=216856|HGNC=|MCL_coexpression_id=42|UniProt=Q69ZK9,Q6PHN2|association_with_transcript=173bp_to_ENSMUST00000056484,ENSMUST00000094069,NM_198862,uc007jrw.1_5end|description=CAGE_peak_10_at_Nlgn2_5end|id=chr11:69648167..69648177,-|ontology_enrichment_celltype=CL:0000393!1.94e-09!39;CL:0000211!1.94e-09!39;CL:0000540!1.09e-08!33;CL:0000047!1.09e-08!33;CL:0000031!1.09e-08!33;CL:0000404!1.09e-08!33;CL:0000117!1.10e-08!23;CL:0000337!1.10e-08!23;CL:0000055!1.28e-07!50;CL:0002319!4.38e-07!43;CL:0000221!8.58e-07!44;CL:0000133!8.58e-07!44|ontology_enrichment_celltype_v019_2=CL:0000878,4.02e-12,2;CL:0000129,4.02e-12,2;CL:0002613,1.88e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.65e-16!73;UBERON:0005743!1.65e-16!73;UBERON:0000073!9.88e-16!75;UBERON:0001016!9.88e-16!75;UBERON:0001049!2.04e-14!52;UBERON:0005068!2.04e-14!52;UBERON:0006241!2.04e-14!52;UBERON:0007135!2.04e-14!52;UBERON:0002020!5.17e-14!34;UBERON:0004121!8.55e-13!102;UBERON:0000924!8.55e-13!102;UBERON:0006601!8.55e-13!102;UBERON:0000955!1.00e-12!50;UBERON:0006238!1.00e-12!50;UBERON:0002791!2.33e-12!29;UBERON:0003528!2.33e-12!29;UBERON:0001893!2.33e-12!29;UBERON:0003080!2.67e-12!40;UBERON:0002346!3.73e-12!71;UBERON:0003075!3.73e-12!71;UBERON:0007284!3.73e-12!71;UBERON:0002616!7.55e-12!49;UBERON:0002780!9.62e-12!39;UBERON:0001890!9.62e-12!39;UBERON:0006240!9.62e-12!39;UBERON:0003056!1.61e-11!49;UBERON:0000033!8.19e-11!63;UBERON:0000956!2.13e-07!21;UBERON:0001869!2.13e-07!21;UBERON:0000203!2.13e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.08e-07,4;UBERON:0002680,8.08e-07,4;UBERON:0001895,8.08e-07,4;UBERON:0010092,8.08e-07,4;UBERON:0006215,8.08e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0.183546752161682,0,0,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0,0,0,1.15265491596466,0.414758449233911,0.270011876663381,0.210324961351382,0,0.441737081903227,0.367472397644862,0.0958454710182364,0,0,0.510749352340751,0,0.131886287730194,0.182975287204819,1.04182674111352,0.279182999001381,0,0.45839474333043,0.589257170947335,0.569486723196412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,3.77004072264219,0,0,0,0,0.149790639404823,0.457500602818626,0.251308704225729,0,0,0.20778804455956,0.162241263067758,0,0.124406970610093,0,0,0.260240885925407,0,0,0,0.204109497453984,0.12811372028485,0,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0,0.292255857911312,0,0.642642632843614,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,0.920650473014354,0.572895513439397,0.515559547031063,0.685082519770642,0.755393897389701,0,0,0.906284817968409,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0.192075457214608,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0.476872379894642,0,0.0941093804153306,0.169229215783353,0,0,0.271608227691724,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p10@Nlgn2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:216856 | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q69ZK9,uniprot:Q6PHN2 | |||
|association_with_transcript=173bp_to_ENSMUST00000056484,ENSMUST00000094069,NM_198862,uc007jrw.1_5end | |||
|cluster_id=chr11:69648167..69648177,- | |||
|description=CAGE_peak_10_at_Nlgn2_5end | |||
|id=chr11:69648167..69648177,- | |||
|ontology_enrichment_celltype=CL:0000393!1.94e-09!39;CL:0000211!1.94e-09!39;CL:0000540!1.09e-08!33;CL:0000047!1.09e-08!33;CL:0000031!1.09e-08!33;CL:0000404!1.09e-08!33;CL:0000117!1.10e-08!23;CL:0000337!1.10e-08!23;CL:0000055!1.28e-07!50;CL:0002319!4.38e-07!43;CL:0000221!8.58e-07!44;CL:0000133!8.58e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000878,4.02e-12,2;CL:0000129,4.02e-12,2;CL:0002613,1.88e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.65e-16!73;UBERON:0005743!1.65e-16!73;UBERON:0000073!9.88e-16!75;UBERON:0001016!9.88e-16!75;UBERON:0001049!2.04e-14!52;UBERON:0005068!2.04e-14!52;UBERON:0006241!2.04e-14!52;UBERON:0007135!2.04e-14!52;UBERON:0002020!5.17e-14!34;UBERON:0004121!8.55e-13!102;UBERON:0000924!8.55e-13!102;UBERON:0006601!8.55e-13!102;UBERON:0000955!1.00e-12!50;UBERON:0006238!1.00e-12!50;UBERON:0002791!2.33e-12!29;UBERON:0003528!2.33e-12!29;UBERON:0001893!2.33e-12!29;UBERON:0003080!2.67e-12!40;UBERON:0002346!3.73e-12!71;UBERON:0003075!3.73e-12!71;UBERON:0007284!3.73e-12!71;UBERON:0002616!7.55e-12!49;UBERON:0002780!9.62e-12!39;UBERON:0001890!9.62e-12!39;UBERON:0006240!9.62e-12!39;UBERON:0003056!1.61e-11!49;UBERON:0000033!8.19e-11!63;UBERON:0000956!2.13e-07!21;UBERON:0001869!2.13e-07!21;UBERON:0000203!2.13e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.08e-07,4;UBERON:0002680,8.08e-07,4;UBERON:0001895,8.08e-07,4;UBERON:0010092,8.08e-07,4;UBERON:0006215,8.08e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0.183546752161682,0,0,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0,0,0,1.15265491596466,0.414758449233911,0.270011876663381,0.210324961351382,0,0.441737081903227,0.367472397644862,0.0958454710182364,0,0,0.510749352340751,0,0.131886287730194,0.182975287204819,1.04182674111352,0.279182999001381,0,0.45839474333043,0.589257170947335,0.569486723196412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,3.77004072264219,0,0,0,0,0.149790639404823,0.457500602818626,0.251308704225729,0,0,0.20778804455956,0.162241263067758,0,0.124406970610093,0,0,0.260240885925407,0,0,0,0.204109497453984,0.12811372028485,0,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0,0.292255857911312,0,0.642642632843614,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,0.920650473014354,0.572895513439397,0.515559547031063,0.685082519770642,0.755393897389701,0,0,0.906284817968409,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0.192075457214608,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0.476872379894642,0,0.0941093804153306,0.169229215783353,0,0,0.271608227691724,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p10@Nlgn2 | |||
}} |
Revision as of 19:42, 3 August 2015
Short description: | p10@Nlgn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Nlgn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | 173bp_to_ENSMUST00000056484, ENSMUST00000094069, NM_198862, uc007jrw.1_5end |
EntrezGene: | 216856 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system macrophage | 4.02e-12 | 2 |
microglial cell | 4.02e-12 | 2 |
striatum neuron | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.08e-07 | 4 |
regional part of metencephalon | 8.08e-07 | 4 |
metencephalon | 8.08e-07 | 4 |
future metencephalon | 8.08e-07 | 4 |
rhombic lip | 8.08e-07 | 4 |