FFCP PHASE1:Hg19::chr15:85923856..85923885,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=11214 | |EntrezGene=entrezgene:11214 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=371 | |HGNC=HGNC:371 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q12802 | |UniProt=uniprot:Q12802 | ||
|association_with_transcript=0bp_to_ENST00000560302,NM_006738,NM_007200,uc002bls.2,uc002blt.1,uc002blu.1,uc002blv.1_5end | |association_with_transcript=0bp_to_ENST00000560302,NM_006738,NM_007200,uc002bls.2,uc002blt.1,uc002blu.1,uc002blv.1_5end | ||
|cluster_id=chr15:85923856..85923885,+ | |||
|coexpression_cluster_id=C3525 | |coexpression_cluster_id=C3525 | ||
|description=CAGE_peak_4_at_AKAP13_5end | |description=CAGE_peak_4_at_AKAP13_5end | ||
Revision as of 05:04, 25 July 2015
| Short description: | p4@AKAP13 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_AKAP13_5end |
| Coexpression cluster: | C3525_CD19_heart_migratory_amniotic_CD4_smooth_chorionic |
| Association with transcript: | 0bp_to_ENST00000560302, NM_006738, NM_007200, uc002bls.2, uc002blt.1, uc002blu.1, uc002blv.1_5end |
| EntrezGene: | 11214 |
| HGNC: | 371 |
| UniProt: | Q12802 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@AKAP13 |
|---|
0
5
10
15
20
25
30
35
40
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphocyte | 1.16e-09 | 53 |
| common lymphoid progenitor | 1.16e-09 | 53 |
| lymphoid lineage restricted progenitor cell | 1.45e-09 | 52 |
| mature alpha-beta T cell | 4.49e-07 | 18 |
| alpha-beta T cell | 4.49e-07 | 18 |
| immature T cell | 4.49e-07 | 18 |
| mature T cell | 4.49e-07 | 18 |
| immature alpha-beta T cell | 4.49e-07 | 18 |
Showing 1 to 8 of 8 entries
