FFCP PHASE1:Hg19::chr14:22356420..22356461,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC= | |HGNC= | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AB305742,AF532837,AF532838,AF532839,AF532840,AF532841,AF532842,AF532843,AF532844,AF532845,AF532847,AF532848,AF532849,AF532850,AF532851,AF532852,AF532853,AF532854,AF532856,AY135832,AY135833,AY135834,AY135835,AY135836,AY135837,AY135838,AY135839,AY135840,AY135841,AY135842,AY135843,AY135844,AY135846,AY135847,AY135849,AY135850,AY135851,AY135852,AY135853,EU340840,M17652,M17653,M27369,S82064,X04940,X04946,X92766,X92783,X92883_5end | |association_with_transcript=0bp_to_AB305742,AF532837,AF532838,AF532839,AF532840,AF532841,AF532842,AF532843,AF532844,AF532845,AF532847,AF532848,AF532849,AF532850,AF532851,AF532852,AF532853,AF532854,AF532856,AY135832,AY135833,AY135834,AY135835,AY135836,AY135837,AY135838,AY135839,AY135840,AY135841,AY135842,AY135843,AY135844,AY135846,AY135847,AY135849,AY135850,AY135851,AY135852,AY135853,EU340840,M17652,M17653,M27369,S82064,X04940,X04946,X92766,X92783,X92883_5end | ||
|cluster_id=chr14:22356420..22356461,+ | |||
|coexpression_cluster_id=C205 | |coexpression_cluster_id=C205 | ||
|description=CAGE_peak_1_at_AB305742_5end,CAGE_peak_1_at_AF532837_5end,CAGE_peak_1_at_AF532838_5end,CAGE_peak_1_at_AF532839_5end,CAGE_peak_1_at_AF532840_5end,CAGE_peak_1_at_AF532841_5end,CAGE_peak_1_at_AF532842_5end,CAGE_peak_1_at_AF532843_5end,CAGE_peak_1_at_AF532844_5end,CAGE_peak_1_at_AF532845_5end,CAGE_peak_1_at_AF532847_5end,CAGE_peak_1_at_AF532848_5end,CAGE_peak_1_at_AF532849_5end,CAGE_peak_1_at_AF532850_5end,CAGE_peak_1_at_AF532851_5end,CAGE_peak_1_at_AF532852_5end,CAGE_peak_1_at_AF532853_5end,CAGE_peak_1_at_AF532854_5end,CAGE_peak_1_at_AF532856_5end,CAGE_peak_1_at_AY135832_5end,CAGE_peak_1_at_AY135833_5end,CAGE_peak_1_at_AY135834_5end,CAGE_peak_1_at_AY135835_5end,CAGE_peak_1_at_AY135836_5end,CAGE_peak_1_at_AY135837_5end,CAGE_peak_1_at_AY135838_5end,CAGE_peak_1_at_AY135839_5end,CAGE_peak_1_at_AY135840_5end,CAGE_peak_1_at_AY135841_5end,CAGE_peak_1_at_AY135842_5end,CAGE_peak_1_at_AY135843_5end,CAGE_peak_1_at_AY135844_5end,CAGE_peak_1_at_AY135846_5end,CAGE_peak_1_at_AY135847_5end,CAGE_peak_1_at_AY135849_5end,CAGE_peak_1_at_AY135850_5end,CAGE_peak_1_at_AY135851_5end,CAGE_peak_1_at_AY135852_5end,CAGE_peak_1_at_AY135853_5end,CAGE_peak_1_at_EU340840_5end,CAGE_peak_1_at_M17652_5end,CAGE_peak_1_at_M17653_5end,CAGE_peak_1_at_M27369_5end,CAGE_peak_1_at_S82064_5end,CAGE_peak_1_at_X04940_5end,CAGE_peak_1_at_X04946_5end,CAGE_peak_1_at_X92766_5end,CAGE_peak_1_at_X92783_5end,CAGE_peak_1_at_X92883_5end | |description=CAGE_peak_1_at_AB305742_5end,CAGE_peak_1_at_AF532837_5end,CAGE_peak_1_at_AF532838_5end,CAGE_peak_1_at_AF532839_5end,CAGE_peak_1_at_AF532840_5end,CAGE_peak_1_at_AF532841_5end,CAGE_peak_1_at_AF532842_5end,CAGE_peak_1_at_AF532843_5end,CAGE_peak_1_at_AF532844_5end,CAGE_peak_1_at_AF532845_5end,CAGE_peak_1_at_AF532847_5end,CAGE_peak_1_at_AF532848_5end,CAGE_peak_1_at_AF532849_5end,CAGE_peak_1_at_AF532850_5end,CAGE_peak_1_at_AF532851_5end,CAGE_peak_1_at_AF532852_5end,CAGE_peak_1_at_AF532853_5end,CAGE_peak_1_at_AF532854_5end,CAGE_peak_1_at_AF532856_5end,CAGE_peak_1_at_AY135832_5end,CAGE_peak_1_at_AY135833_5end,CAGE_peak_1_at_AY135834_5end,CAGE_peak_1_at_AY135835_5end,CAGE_peak_1_at_AY135836_5end,CAGE_peak_1_at_AY135837_5end,CAGE_peak_1_at_AY135838_5end,CAGE_peak_1_at_AY135839_5end,CAGE_peak_1_at_AY135840_5end,CAGE_peak_1_at_AY135841_5end,CAGE_peak_1_at_AY135842_5end,CAGE_peak_1_at_AY135843_5end,CAGE_peak_1_at_AY135844_5end,CAGE_peak_1_at_AY135846_5end,CAGE_peak_1_at_AY135847_5end,CAGE_peak_1_at_AY135849_5end,CAGE_peak_1_at_AY135850_5end,CAGE_peak_1_at_AY135851_5end,CAGE_peak_1_at_AY135852_5end,CAGE_peak_1_at_AY135853_5end,CAGE_peak_1_at_EU340840_5end,CAGE_peak_1_at_M17652_5end,CAGE_peak_1_at_M17653_5end,CAGE_peak_1_at_M27369_5end,CAGE_peak_1_at_S82064_5end,CAGE_peak_1_at_X04940_5end,CAGE_peak_1_at_X04946_5end,CAGE_peak_1_at_X92766_5end,CAGE_peak_1_at_X92783_5end,CAGE_peak_1_at_X92883_5end |
Latest revision as of 19:06, 24 July 2015
Short description: | p1@AB305742, p1@AF532837, p1@AF532838, p1@AF532839, p1@AF532840, p1@AF532841, p1@AF532842, p1@AF532843, p1@AF532844, p1@AF532845, p1@AF532847, p1@AF532848, p1@AF532849, p1@AF532850, p1@AF532851, p1@AF532852, p1@AF532853, p1@AF532854, p1@AF532856, p1@AY135832, p1@AY135833, p1@AY135834, p1@AY135835, p1@AY135836, p1@AY135837, p1@AY135838, p1@AY135839, p1@AY135840, p1@AY135841, p1@AY135842, p1@AY135843, p1@AY135844, p1@AY135846, p1@AY135847, p1@AY135849, p1@AY135850, p1@AY135851, p1@AY135852, p1@AY135853, p1@EU340840, p1@M17652, p1@M17653, p1@M27369, p1@S82064, p1@X04940, p1@X04946, p1@X92766, p1@X92783, p1@X92883 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB305742_5end, CAGE_peak_1_at_AF532837_5end, CAGE_peak_1_at_AF532838_5end, CAGE_peak_1_at_AF532839_5end, CAGE_peak_1_at_AF532840_5end, CAGE_peak_1_at_AF532841_5end, CAGE_peak_1_at_AF532842_5end, CAGE_peak_1_at_AF532843_5end, CAGE_peak_1_at_AF532844_5end, CAGE_peak_1_at_AF532845_5end, CAGE_peak_1_at_AF532847_5end, CAGE_peak_1_at_AF532848_5end, CAGE_peak_1_at_AF532849_5end, CAGE_peak_1_at_AF532850_5end, CAGE_peak_1_at_AF532851_5end, CAGE_peak_1_at_AF532852_5end, CAGE_peak_1_at_AF532853_5end, CAGE_peak_1_at_AF532854_5end, CAGE_peak_1_at_AF532856_5end, CAGE_peak_1_at_AY135832_5end, CAGE_peak_1_at_AY135833_5end, CAGE_peak_1_at_AY135834_5end, CAGE_peak_1_at_AY135835_5end, CAGE_peak_1_at_AY135836_5end, CAGE_peak_1_at_AY135837_5end, CAGE_peak_1_at_AY135838_5end, CAGE_peak_1_at_AY135839_5end, CAGE_peak_1_at_AY135840_5end, CAGE_peak_1_at_AY135841_5end, CAGE_peak_1_at_AY135842_5end, CAGE_peak_1_at_AY135843_5end, CAGE_peak_1_at_AY135844_5end, CAGE_peak_1_at_AY135846_5end, CAGE_peak_1_at_AY135847_5end, CAGE_peak_1_at_AY135849_5end, CAGE_peak_1_at_AY135850_5end, CAGE_peak_1_at_AY135851_5end, CAGE_peak_1_at_AY135852_5end, CAGE_peak_1_at_AY135853_5end, CAGE_peak_1_at_EU340840_5end, CAGE_peak_1_at_M17652_5end, CAGE_peak_1_at_M17653_5end, CAGE_peak_1_at_M27369_5end, CAGE_peak_1_at_S82064_5end, CAGE_peak_1_at_X04940_5end, CAGE_peak_1_at_X04946_5end, CAGE_peak_1_at_X92766_5end, CAGE_peak_1_at_X92783_5end, CAGE_peak_1_at_X92883_5end |
Coexpression cluster: | C205_mycosis_cord_hairy_xeroderma_CD4_B_b |
Association with transcript: | 0bp_to_AB305742, AF532837, AF532838, AF532839, AF532840, AF532841, AF532842, AF532843, AF532844, AF532845, AF532847, AF532848, AF532849, AF532850, AF532851, AF532852, AF532853, AF532854, AF532856, AY135832, AY135833, AY135834, AY135835, AY135836, AY135837, AY135838, AY135839, AY135840, AY135841, AY135842, AY135843, AY135844, AY135846, AY135847, AY135849, AY135850, AY135851, AY135852, AY135853, EU340840, M17652, M17653, M27369, S82064, X04940, X04946, X92766, X92783, X92883_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.15e-09 | 25 |
pro-T cell | 2.15e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 5.42e-195 | 1 |
cutaneous T cell lymphoma | 5.42e-195 | 1 |
mycosis fungoides | 5.42e-195 | 1 |
lymphoma | 3.81e-21 | 10 |