FFCP PHASE1:Hg19::chr11:122022942..122022947,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=406892 | |EntrezGene=entrezgene:406892 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=31487 | |HGNC=HGNC:31487 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=68bp_to_NR_029515,uc001pyh.1_5end | |association_with_transcript=68bp_to_NR_029515,uc001pyh.1_5end | ||
|cluster_id=chr11:122022942..122022947,- | |||
|coexpression_cluster_id=C3103 | |coexpression_cluster_id=C3103 | ||
|description=CAGE_peak_1_at_MIR100_5end | |description=CAGE_peak_1_at_MIR100_5end |
Revision as of 19:17, 23 July 2015
Short description: | p1@MIR100 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR100_5end |
Coexpression cluster: | C3103_Fibroblast_prostate_Olfactory_Smooth_meningioma_Preadipocyte_Myoblast |
Association with transcript: | 68bp_to_NR_029515, uc001pyh.1_5end |
EntrezGene: | 406892 |
HGNC: | 31487 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@MIR100 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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fibroblast | 1.03e-24 | 76 |
fibroblast of tunica adventitia of artery | 8.20e-21 | 4 |
fibroblast of the aortic adventitia | 8.20e-21 | 4 |
skin fibroblast | 7.73e-08 | 23 |
fibrocyte | 1.13e-07 | 3 |
tendon cell | 1.13e-07 | 3 |
multi fate stem cell | 8.70e-07 | 427 |
Showing 1 to 7 of 7 entries
Ontology term | p-value | n |
---|---|---|
artery wall | 8.20e-21 | 4 |
tunica adventitia of artery | 8.20e-21 | 4 |
adventitia | 8.20e-21 | 4 |
tunica adventitia of blood vessel | 8.20e-21 | 4 |
aorta tunica adventitia | 8.20e-21 | 4 |
aorta wall | 8.20e-21 | 4 |
blood vessel layer | 5.90e-12 | 7 |
aorta | 2.75e-08 | 21 |
aortic system | 2.75e-08 | 21 |
dense regular connective tissue | 1.13e-07 | 3 |
Showing 1 to 10 of 13 entries