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(Created page with "{{f5samples |accession_numbers=Experiment_method;DRA_experiment_accession;DRA_run_accession;DRA_bam_accession;DRA_ctss_accession!Experiment_method;DRA_experiment_accession;DRA...")
 
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{{f5samples
{{f5samples
|DRA_sample_Accession=Experimenet_method@DRA_sample_accession
|accession_numbers=Experiment_method;DRA_experiment_accession;DRA_run_accession;DRA_bam_accession;DRA_ctss_accession!Experiment_method;DRA_experiment_accession;DRA_run_accession;DRA_bam_accession;DRA_ctss_accession!Experiment_method;DRA_experiment_accession;DRA_run_accession;DRA_bam_accession;DRA_ctss_accession!Experimenet_method;DRA_experiment_accession;DRA_run_accession;DRA_bam_accession;DRA_ctss_accession!Experimenet_method;DRA_experiment_accession;DRA_run_accession;DRA_bam_accession;DRA_ctss_accession!Experimenet_method;DRA_experiment_accession;DRA_run_accession;DRA_bam_accession;DRA_ctss_accession!Experimenet_method;DRA_experiment_accession;DRA_run_accession;DRA_bam_accession;DRA_ctss_accession!Experimenet_method;DRA_experiment_accession;DRA_run_accession;DRA_bam_accession;DRA_ctss_accession
|accession_numbers=Experiment_method;DRA_experiment_accession;DRA_run_accession;DRA_bam_accession;DRA_ctss_accession!Experiment_method;DRA_experiment_accession;DRA_run_accession;DRA_bam_accession;DRA_ctss_accession!Experiment_method;DRA_experiment_accession;DRA_run_accession;DRA_bam_accession;DRA_ctss_accession!Experimenet_method;DRA_experiment_accession;DRA_run_accession;DRA_bam_accession;DRA_ctss_accession!Experimenet_method;DRA_experiment_accession;DRA_run_accession;DRA_bam_accession;DRA_ctss_accession!Experimenet_method;DRA_experiment_accession;DRA_run_accession;DRA_bam_accession;DRA_ctss_accession!Experimenet_method;DRA_experiment_accession;DRA_run_accession;DRA_bam_accession;DRA_ctss_accession!Experimenet_method;DRA_experiment_accession;DRA_run_accession;DRA_bam_accession;DRA_ctss_accession
}}
}}

Latest revision as of 21:20, 3 December 2014


Name:{{{name}}}
Species:{{{sample_species}}}
Library ID:{{{library_id}}}
Sample type:{{{sample_category}}}
Additional information
Sample information
strain{{{sample_strain}}}
tissue{{{sample_tissue}}}
dev stage{{{sample_dev_stage}}}
sex{{{sample_sex}}}
age{{{sample_age}}}
cell type{{{sample_cell_type}}}
cell line{{{sample_cell_line}}}
company{{{sample_company}}}
collaboration{{{sample_collaboration}}}
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number{{{rna_lot_number}}}
catalog number{{{rna_catalog_number}}}
sample type{{{rna_sample_type}}}
extraction protocol (Details){{{rna_extraction_protocol}}}

CAGE Accession numbers
MethodSample accession id
Experimenet_method  DRA_sample_accession
Library accession numbers

Library idMethodExp. accession idRun accession id
{{{library_id}}} Experiment_method DRA_experiment_accession DRA_run_accession
Experiment_method DRA_experiment_accession DRA_run_accession
Experiment_method DRA_experiment_accession DRA_run_accession
Experimenet_method DRA_experiment_accession DRA_run_accession
Experimenet_method DRA_experiment_accession DRA_run_accession
Experimenet_method DRA_experiment_accession DRA_run_accession
Experimenet_method DRA_experiment_accession DRA_run_accession
Experimenet_method DRA_experiment_accession DRA_run_accession
Accession ID

Library idBAMCTSS
{{{library_id}}} DRA_bam_accession DRA_ctss_accession
DRA_bam_accession DRA_ctss_accession
DRA_bam_accession DRA_ctss_accession
DRA_bam_accession DRA_ctss_accession
DRA_bam_accession DRA_ctss_accession
DRA_bam_accession DRA_ctss_accession
DRA_bam_accession DRA_ctss_accession
DRA_bam_accession DRA_ctss_accession



FANTOM5 (FF) ontology


Direct parent terms

is_a relathionship
{{{is_a}}}

part_of relathionship
{{{part_of}}}

has_quality relathionship
{{{has_quality}}}

Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
NA

DOID: Disease
NA

UBERON: Anatomy
NA

FF: FANTOM5
NA

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA