UBERON:0010260: Difference between revisions
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|located_in= | |located_in= | ||
|name=umbilical blood vessel | |name=umbilical blood vessel | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 18:08, 12 September 2014
| Name: | umbilical blood vessel |
|---|---|
| Namespace: | FANTOM |
| Synonyms: | "umbilical cord blood vessel" EXACT [] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001981(blood vessel) |
|---|
Children
| is a: | UBERON:0001310 (umbilical artery),UBERON:0002066 (umbilical vein) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11212-116A6 (Smooth Muscle Cells - Umbilical artery, donor0)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11290-117A3 (Smooth Muscle Cells - Umbilical Artery, donor1)
- 11324-117E1 (Endothelial Cells - Umbilical vein, donor2)
- 11367-117I8 (Smooth Muscle Cells - Umbilical Artery, donor2)
- 11400-118D5 (Endothelial Cells - Umbilical vein, donor3)
- 11439-118H8 (Smooth Muscle Cells - Umbilical Artery, donor3)
- 11541-120B2 (Smooth Muscle Cells - Umbilical Vein, donor1)
- 11621-122B1 (Smooth Muscle Cells - Umbilical Vein, donor2)
- 11702-123B1 (Smooth Muscle Cells - Umbilical Vein, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010260 (umbilical blood vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 4.58e-53 | FFCP PHASE1:Hg19::chr13:28903811..28903815,-#_b4e18023577d7d358c9a60915dac57c8 | p3@FLT1 |
| 4.58e-53 | FFCP PHASE2:Hg19::chr13:28903811..28903815,-#_b4e18023577d7d358c9a60915dac57c8 | p3@FLT1 |
| 9.75e-45 | FFCP PHASE1:Hg19::chr1:78512168..78512171,-#_5f67d05bf15360b6a4c1b086becc14d0 | p@chr1:78512168..78512171, - |
| 9.75e-45 | FFCP PHASE2:Hg19::chr1:78512168..78512171,-#_5f67d05bf15360b6a4c1b086becc14d0 | p@chr1:78512168..78512171, - |
| 4.97e-40 | FFCP PHASE1:Hg19::chr12:65928345..65928348,-#_e09104a8c9a03077bd60af0f9cb434f5 | p@chr12:65928345..65928348, - |
| 4.97e-40 | FFCP PHASE2:Hg19::chr12:65928345..65928348,-#_e09104a8c9a03077bd60af0f9cb434f5 | p@chr12:65928345..65928348, - |
| 8.87e-34 | FFCP PHASE2:Hg19::chr1:78510648..78510661,+#_01c0d485e09e5a211b9698fef3c09c2e | p7@GIPC2 |
| 8.87e-34 | FFCP PHASE2:Hg19::chr10:94590950..94590955,+#_01c0d485e09e5a211b9698fef3c09c2e | p13@EXOC6 |
| 8.87e-34 | FFCP PHASE1:Hg19::chr10:94590950..94590955,+#_01c0d485e09e5a211b9698fef3c09c2e | p13@EXOC6 |
| 8.87e-34 | FFCP PHASE1:Hg19::chr1:78510648..78510661,+#_01c0d485e09e5a211b9698fef3c09c2e | p7@GIPC2 |
| 1.24e-33 | FFCP PHASE2:Hg19::chr13:28896641..28896653,-#_ab99f3e9468971711ff9302eda9cf33c | p5@FLT1 |
| 1.24e-33 | FFCP PHASE1:Hg19::chr13:28896641..28896653,-#_ab99f3e9468971711ff9302eda9cf33c | p5@FLT1 |
| 1.73e-33 | FFCP PHASE2:Hg19::chr12:105962745..105962748,+#_a5a145081a04d49948b9a4301e068e78 | p@chr12:105962745..105962748, + |
| 1.73e-33 | FFCP PHASE1:Hg19::chr12:105962745..105962748,+#_a5a145081a04d49948b9a4301e068e78 | p@chr12:105962745..105962748, + |
| 1.93e-33 | FFCP PHASE2:Hg19::chr3:42515138..42515150,-#_d346db9d9cfabcea4b903d0047f3cbeb | p@chr3:42515138..42515150, - |
| 1.93e-33 | FFCP PHASE1:Hg19::chr3:42515138..42515150,-#_d346db9d9cfabcea4b903d0047f3cbeb | p@chr3:42515138..42515150, - |
| 3.59e-30 | FFCP PHASE2:Hg19::chr11:116728907..116728948,+#_d04d43a708c80da40962631185560709 | p2@CU690121 |
| 3.59e-30 | FFCP PHASE1:Hg19::chr11:116728907..116728948,+#_d04d43a708c80da40962631185560709 | p2@CU690121 |
| 4.14e-29 | FFCP PHASE2:Hg19::chr13:75941109..75941132,-#_0c76bb97fd4b8273a6c7e16ccc18706d | p@chr13:75941109..75941132, - |
| 4.14e-29 | FFCP PHASE1:Hg19::chr13:75941109..75941132,-#_0c76bb97fd4b8273a6c7e16ccc18706d | p@chr13:75941109..75941132, - |
| 6.2e-29 | FFCP PHASE1:Hg19::chr1:78511901..78511912,+#_b8c6f78f4d297739b8772ab77ebb8965 | p6@GIPC2 |
| 6.2e-29 | FFCP PHASE2:Hg19::chr1:78511901..78511912,+#_b8c6f78f4d297739b8772ab77ebb8965 | p6@GIPC2 |
| 9.98e-29 | FFCP PHASE2:Hg19::chr11:59875891..59875903,-#_6602217ba7d40b906fc28d020d17aa74 | p@chr11:59875891..59875903, - |
| 9.98e-29 | FFCP PHASE1:Hg19::chr11:59875891..59875903,-#_6602217ba7d40b906fc28d020d17aa74 | p@chr11:59875891..59875903, - |
| 1.09e-26 | FFCP PHASE2:Hg19::chr12:54362447..54362462,-#_78eff34bec4c93efe696c4b26692f3f8 | p1@HOTAIR |
| 1.09e-26 | FFCP PHASE1:Hg19::chr12:54362447..54362462,-#_78eff34bec4c93efe696c4b26692f3f8 | p1@HOTAIR |
| 1.17e-25 | FFCP PHASE1:Hg19::chr18:53146977..53146999,-#_2cd03508807fc1086b3f621590dc48d3 | p@chr18:53146977..53146999, - |
| 1.17e-25 | FFCP PHASE2:Hg19::chr18:53146977..53146999,-#_2cd03508807fc1086b3f621590dc48d3 | p@chr18:53146977..53146999, - |
| 1.92e-25 | FFCP PHASE2:Hg19::chr10:94590997..94591006,+#_7065655a83126e7ca8acaa73679f1062 | p11@EXOC6 |
| 1.92e-25 | FFCP PHASE1:Hg19::chr10:94590997..94591006,+#_7065655a83126e7ca8acaa73679f1062 | p11@EXOC6 |
| 2.27e-25 | FFCP PHASE1:Hg19::chr12:105863737..105863745,+#_4a3e470cb4d17a133c7d588a9f78a13e | p@chr12:105863737..105863745, + |
| 2.27e-25 | FFCP PHASE2:Hg19::chr12:105863737..105863745,+#_4a3e470cb4d17a133c7d588a9f78a13e | p@chr12:105863737..105863745, + |
| 2.62e-23 | FFCP PHASE1:Hg19::chr17:54543642..54543647,+#_60bf0ef4f609c73e09d864695157b9b3 | p@chr17:54543642..54543647, + |
| 2.62e-23 | FFCP PHASE2:Hg19::chr17:54543635..54543636,+#_60bf0ef4f609c73e09d864695157b9b3 | p@chr17:54543635..54543636, + |
| 2.62e-23 | FFCP PHASE2:Hg19::chr17:54543642..54543647,+#_60bf0ef4f609c73e09d864695157b9b3 | p@chr17:54543642..54543647, + |
| 2.62e-23 | FFCP PHASE1:Hg19::chr17:54543635..54543636,+#_60bf0ef4f609c73e09d864695157b9b3 | p@chr17:54543635..54543636, + |
| 4.59e-23 | FFCP PHASE2:Hg19::chr12:105889929..105889933,+#_27c2e4dcbf61c0ae7bf8cdd974fa3578 | p@chr12:105889929..105889933, + |
| 4.59e-23 | FFCP PHASE2:Hg19::chr16:82788994..82789018,+#_27c2e4dcbf61c0ae7bf8cdd974fa3578 | p@chr16:82788994..82789018, + |
| 4.59e-23 | FFCP PHASE1:Hg19::chr12:105889929..105889933,+#_27c2e4dcbf61c0ae7bf8cdd974fa3578 | p@chr12:105889929..105889933, + |
| 4.59e-23 | FFCP PHASE1:Hg19::chr16:82788994..82789018,+#_27c2e4dcbf61c0ae7bf8cdd974fa3578 | p@chr16:82788994..82789018, + |
| 8.69e-23 | FFCP PHASE2:Hg19::chr5:63803524..63803561,+#_e5f5468b5d64158c1a59360e3b917a41 | p15@RGS7BP |
| 8.69e-23 | FFCP PHASE1:Hg19::chr5:63803524..63803561,+#_e5f5468b5d64158c1a59360e3b917a41 | p15@RGS7BP |
| 1.46e-22 | FFCP PHASE2:Hg19::chr21:27284505..27284518,-#_66c7520513a11b06e8b0a2218164ed40 | p@chr21:27284505..27284518, - |
| 1.46e-22 | FFCP PHASE1:Hg19::chr21:27284505..27284518,-#_66c7520513a11b06e8b0a2218164ed40 | p@chr21:27284505..27284518, - |
| 3.48e-22 | FFCP PHASE2:Hg19::chr12:26783618..26783634,-#_7e7a033e3c32bb26ac6e40487d39dc77 | p8@ITPR2 |
| 3.48e-22 | FFCP PHASE1:Hg19::chr12:26783618..26783634,-#_7e7a033e3c32bb26ac6e40487d39dc77 | p8@ITPR2 |
| 3.57e-22 | FFCP PHASE2:Hg19::chr6:78171746..78171769,+#_fb037a6f350caab615fb78eddd10ba97 | p@chr6:78171746..78171769, + |
| 3.57e-22 | FFCP PHASE1:Hg19::chr6:78171746..78171769,+#_fb037a6f350caab615fb78eddd10ba97 | p@chr6:78171746..78171769, + |
| 1.09e-20 | FFCP PHASE1:Hg19::chr1:172926077..172926120,-#_39b5da94ade8ec1ef8f867476676e53d | p@chr1:172926077..172926120, - |
| 1.09e-20 | FFCP PHASE2:Hg19::chr1:172926077..172926120,-#_39b5da94ade8ec1ef8f867476676e53d | p@chr1:172926077..172926120, - |
| 1.24e-20 | FFCP PHASE1:Hg19::chr19:7861475..7861491,+#_99407aeb711142e83a64f56d6087a60e | p@chr19:7861475..7861491, + |
| 1.24e-20 | FFCP PHASE2:Hg19::chr19:7861475..7861491,+#_99407aeb711142e83a64f56d6087a60e | p@chr19:7861475..7861491, + |
| 4.99e-20 | FFCP PHASE2:Hg19::chr1:243433014..243433053,+#_7455fd838089f8afd54ffa4d4fa1a8ec | p@chr1:243433014..243433053, + |
| 4.99e-20 | FFCP PHASE1:Hg19::chr1:243433014..243433053,+#_7455fd838089f8afd54ffa4d4fa1a8ec | p@chr1:243433014..243433053, + |
| 6.02e-19 | FFCP PHASE2:Hg19::chr10:59999608..59999621,-#_bd3de7d893ff351bfc333e3a8102a511 | p@chr10:59999608..59999621, - |
| 6.02e-19 | FFCP PHASE1:Hg19::chr10:59999608..59999621,-#_bd3de7d893ff351bfc333e3a8102a511 | p@chr10:59999608..59999621, - |
| 1.17e-18 | FFCP PHASE2:Hg19::chr1:186946611..186946622,+#_efa397737a53675f3410db0f642d2e81 | p@chr1:186946611..186946622, + |
| 1.17e-18 | FFCP PHASE1:Hg19::chr1:186946611..186946622,+#_efa397737a53675f3410db0f642d2e81 | p@chr1:186946611..186946622, + |
| 1.48e-18 | FFCP PHASE2:Hg19::chr1:225516893..225516902,-#_b77a10d1bc3183cef9e499cbf92b6068 | p@chr1:225516893..225516902, - |
| 1.48e-18 | FFCP PHASE1:Hg19::chr1:225516893..225516902,-#_b77a10d1bc3183cef9e499cbf92b6068 | p@chr1:225516893..225516902, - |
| 1.68e-18 | FFCP PHASE2:Hg19::chr8:90556171..90556173,+#_97d9b3bec791829f41b183af3ab6d97f | p@chr8:90556171..90556173, + |
| 1.68e-18 | FFCP PHASE1:Hg19::chr8:90556171..90556173,+#_97d9b3bec791829f41b183af3ab6d97f | p@chr8:90556171..90556173, + |
| 2.22e-18 | FFCP PHASE2:Hg19::chr12:54359771..54359813,+#_b0b2381126a3db2fada9a897d28560bc | p@chr12:54359771..54359813, + |
| 2.22e-18 | FFCP PHASE1:Hg19::chr12:54359771..54359813,+#_b0b2381126a3db2fada9a897d28560bc | p@chr12:54359771..54359813, + |
| 7.26e-18 | FFCP PHASE2:Hg19::chr2:18479033..18479051,+#_33d2acb78d0d5ef019b1b4681b515b74 | p@chr2:18479033..18479051, + |
| 7.26e-18 | FFCP PHASE1:Hg19::chr2:18479033..18479051,+#_33d2acb78d0d5ef019b1b4681b515b74 | p@chr2:18479033..18479051, + |
| 1.01e-17 | FFCP PHASE2:Hg19::chr13:75941133..75941160,-#_1cdbefd399abe22037b0908fcde99466 | p@chr13:75941133..75941160, - |
| 1.01e-17 | FFCP PHASE1:Hg19::chr13:75941133..75941160,-#_1cdbefd399abe22037b0908fcde99466 | p@chr13:75941133..75941160, - |
| 2.32e-17 | FFCP PHASE2:Hg19::chr12:26783639..26783652,-#_65c2ee88e1b5150aee36b12314127760 | p9@ITPR2 |
| 2.32e-17 | FFCP PHASE1:Hg19::chr12:26783639..26783652,-#_65c2ee88e1b5150aee36b12314127760 | p9@ITPR2 |
| 2.68e-17 | FFCP PHASE1:Hg19::chr12:105863627..105863633,+#_8c823635ee3396cca9bb01237e03ccf3 | p@chr12:105863627..105863633, + |
| 2.68e-17 | FFCP PHASE2:Hg19::chr12:105863627..105863633,+#_8c823635ee3396cca9bb01237e03ccf3 | p@chr12:105863627..105863633, + |
| 4.39e-17 | FFCP PHASE2:Hg19::chr22:21138343..21138378,+#_fdbf9b8b9510daae9b9786760ff30a96 | p@chr22:21138343..21138378, + |
| 4.39e-17 | FFCP PHASE1:Hg19::chr22:21138343..21138378,+#_fdbf9b8b9510daae9b9786760ff30a96 | p@chr22:21138343..21138378, + |
| 9.72e-17 | FFCP PHASE2:Hg19::chr2:18479067..18479081,+#_6ce383536dda1aff924c45a7df679533 | p@chr2:18479067..18479081, + |
| 9.72e-17 | FFCP PHASE1:Hg19::chr2:18479067..18479081,+#_6ce383536dda1aff924c45a7df679533 | p@chr2:18479067..18479081, + |
| 4.66e-16 | FFCP PHASE2:Hg19::chr6:142622846..142622853,+#_0e708c26122cb2ba496d8841fa326926 | p12@GPR126 |
| 4.66e-16 | FFCP PHASE1:Hg19::chr6:142622846..142622853,+#_0e708c26122cb2ba496d8841fa326926 | p12@GPR126 |
| 6.33e-16 | FFCP PHASE1:Hg19::chr6:136359549..136359565,+#_3437c79aa1b202077235501554eacd7d | p2@AB384352 |
| 6.33e-16 | FFCP PHASE2:Hg19::chr6:136359549..136359565,+#_3437c79aa1b202077235501554eacd7d | p2@AB384352 |
| 6.66e-16 | FFCP PHASE2:Hg19::chr10:90713570..90713574,+#_5f79db70ad39a34c23fcc3d8d8786cb9 | p@chr10:90713570..90713574, + |
| 6.66e-16 | FFCP PHASE1:Hg19::chr10:90713570..90713574,+#_5f79db70ad39a34c23fcc3d8d8786cb9 | p@chr10:90713570..90713574, + |
| 9.76e-16 | FFCP PHASE1:Hg19::chr8:55370720..55370733,+#_ec4eb27c7118b0da4b5cf382b4c002ee | p2@SOX17 |
| 9.76e-16 | FFCP PHASE2:Hg19::chr8:55370720..55370733,+#_ec4eb27c7118b0da4b5cf382b4c002ee | p2@SOX17 |
| 1.13e-15 | FFCP PHASE2:Hg19::chr2:72789511..72789554,-#_188ef71d22917c26f8b730f2be9f742a | p@chr2:72789511..72789554, - |
| 1.13e-15 | FFCP PHASE1:Hg19::chr2:72789511..72789554,-#_188ef71d22917c26f8b730f2be9f742a | p@chr2:72789511..72789554, - |
| 1.22e-15 | FFCP PHASE1:Hg19::chr15:22545370..22545372,+#_ace2c49832dd4ddec07c51d5b47367c5 | p@chr15:22545370..22545372, + |
| 1.22e-15 | FFCP PHASE2:Hg19::chr15:22545370..22545372,+#_ace2c49832dd4ddec07c51d5b47367c5 | p@chr15:22545370..22545372, + |
| 1.31e-15 | FFCP PHASE2:Hg19::chr1:219514172..219514177,-#_33c3eaeb6ae7ab53cb284e7cd1b536bc | p@chr1:219514172..219514177, - |
| 1.31e-15 | FFCP PHASE1:Hg19::chr1:219514172..219514177,-#_33c3eaeb6ae7ab53cb284e7cd1b536bc | p@chr1:219514172..219514177, - |
| 1.34e-15 | FFCP PHASE1:Hg19::chr7:22629318..22629324,+#_8929c1028d7d4ef8de4d1679f1e5d074 | p1@ENST00000439823 |
| 1.34e-15 | FFCP PHASE2:Hg19::chr7:22629318..22629324,+#_8929c1028d7d4ef8de4d1679f1e5d074 | p1@ENST00000439823 |
| 1.52e-15 | FFCP PHASE1:Hg19::chr4:48082192..48082207,-#_60d3571f32cb3df364a23bb14619fbdd | p3@TXK |
| 1.52e-15 | FFCP PHASE2:Hg19::chr11:59876093..59876098,-#_60d3571f32cb3df364a23bb14619fbdd | p@chr11:59876093..59876098, - |
| 1.52e-15 | FFCP PHASE1:Hg19::chr11:59876093..59876098,-#_60d3571f32cb3df364a23bb14619fbdd | p@chr11:59876093..59876098, - |
| 1.52e-15 | FFCP PHASE2:Hg19::chr4:48082192..48082207,-#_60d3571f32cb3df364a23bb14619fbdd | p3@TXK |
| 3.32e-15 | FFCP PHASE2:Hg19::chr16:86965053..86965066,-#_df7f777e851e42f8e71cc0ccdcd6696e | p@chr16:86965053..86965066, - |
| 3.32e-15 | FFCP PHASE1:Hg19::chr16:86965053..86965066,-#_df7f777e851e42f8e71cc0ccdcd6696e | p@chr16:86965053..86965066, - |
| 2.71e-14 | FFCP PHASE2:Hg19::chr9:116716048..116716100,+#_c6e4c4b94e7d3e8ef16d1709df98d041 | p@chr9:116716048..116716100, + |
| 2.71e-14 | FFCP PHASE1:Hg19::chr9:116716048..116716100,+#_c6e4c4b94e7d3e8ef16d1709df98d041 | p@chr9:116716048..116716100, + |
