UBERON:0008949: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=lower lobe of lung | |name=lower lobe of lung | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 18:04, 12 September 2014
| Name: | lower lobe of lung | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Xrefs: |
| ||
| Synonyms: |
"inferior lobe of lung" EXACT [UBERON:cjm] "lobus inferior" EXACT [UBERON:cjm] "lobus inferior pulmonis" EXACT [UBERON:cjm] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000101(lobe of lung) |
|---|
Children
| is a: | UBERON:0002171 (lower lobe of right lung) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10075-102A3 (lung, right lower lobe, adult, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0008949 (lower lobe of lung), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE1:Hg19::chr6:32148852..32148862,-#_bef33ec200cd410d7b94069b813ecb61 | p@chr6:32148852..32148862, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:85894638..85894644,+#_bef33ec200cd410d7b94069b813ecb61 | p@chr2:85894638..85894644, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:85893058..85893063,-#_bef33ec200cd410d7b94069b813ecb61 | p35@SFTPB |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:96331830..96331836,+#_bef33ec200cd410d7b94069b813ecb61 | p1@ENST00000425887, p1@uc002suw.1 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:85884987..85884992,-#_bef33ec200cd410d7b94069b813ecb61 | p@chr2:85884987..85884992, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chrX:93772866..93772868,-#_bef33ec200cd410d7b94069b813ecb61 | p@chrX:93772866..93772868, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:85893058..85893063,-#_bef33ec200cd410d7b94069b813ecb61 | p35@SFTPB |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:85884987..85884992,-#_bef33ec200cd410d7b94069b813ecb61 | p@chr2:85884987..85884992, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr8:22021803..22021813,-#_bef33ec200cd410d7b94069b813ecb61 | p@chr8:22021803..22021813, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr10:81316872..81316887,+#_bef33ec200cd410d7b94069b813ecb61 | p@chr10:81316872..81316887, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:85894675..85894679,+#_bef33ec200cd410d7b94069b813ecb61 | p@chr2:85894675..85894679, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:211117597..211117606,+#_bef33ec200cd410d7b94069b813ecb61 | p@chr2:211117597..211117606, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chrX:93772866..93772868,-#_bef33ec200cd410d7b94069b813ecb61 | p@chrX:93772866..93772868, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr10:81374723..81374726,-#_bef33ec200cd410d7b94069b813ecb61 | p@chr10:81374723..81374726, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr8:22021803..22021813,-#_bef33ec200cd410d7b94069b813ecb61 | p@chr8:22021803..22021813, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:85894675..85894679,+#_bef33ec200cd410d7b94069b813ecb61 | p@chr2:85894675..85894679, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:211117597..211117606,+#_bef33ec200cd410d7b94069b813ecb61 | p@chr2:211117597..211117606, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr10:81316085..81316090,-#_bef33ec200cd410d7b94069b813ecb61 | p@chr10:81316085..81316090, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr10:81316872..81316887,+#_bef33ec200cd410d7b94069b813ecb61 | p@chr10:81316872..81316887, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr10:81374723..81374726,-#_bef33ec200cd410d7b94069b813ecb61 | p@chr10:81374723..81374726, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr10:81316085..81316090,-#_bef33ec200cd410d7b94069b813ecb61 | p@chr10:81316085..81316090, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr6:32148852..32148862,-#_bef33ec200cd410d7b94069b813ecb61 | p@chr6:32148852..32148862, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:85894638..85894644,+#_bef33ec200cd410d7b94069b813ecb61 | p@chr2:85894638..85894644, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:96331830..96331836,+#_bef33ec200cd410d7b94069b813ecb61 | p1@ENST00000425887, p1@uc002suw.1 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr3:127109563..127109564,-#_b4364cd1602019de0f43a767d8c3369a | p2@ENST00000488425, p2@uc003ejj.2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:32150708..32150711,-#_b4364cd1602019de0f43a767d8c3369a | p7@AGER |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:23631651..23631656,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:23631651..23631656, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81315944..81315951,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81315944..81315951, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:22020994..22020998,+#_b4364cd1602019de0f43a767d8c3369a | p@chr8:22020994..22020998, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81316558..81316565,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316558..81316565, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81374331..81374339,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81374331..81374339, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:117746871..117746882,-#_b4364cd1602019de0f43a767d8c3369a | p10@ROS1 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:85885348..85885355,-#_b4364cd1602019de0f43a767d8c3369a | p@chr2:85885348..85885355, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:85889234..85889238,-#_b4364cd1602019de0f43a767d8c3369a | p@chr2:85889234..85889238, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:22021526..22021532,+#_b4364cd1602019de0f43a767d8c3369a | p@chr8:22021526..22021532, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:85892915..85892916,-#_b4364cd1602019de0f43a767d8c3369a | p40@SFTPB |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81316132..81316137,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316132..81316137, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81316764..81316776,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316764..81316776, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81374587..81374595,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81374587..81374595, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:32148869..32148878,-#_b4364cd1602019de0f43a767d8c3369a | p@chr6:32148869..32148878, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:22020196..22020202,+#_b4364cd1602019de0f43a767d8c3369a | p13@SFTPC |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:85894661..85894668,+#_b4364cd1602019de0f43a767d8c3369a | p@chr2:85894661..85894668, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81316023..81316032,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316023..81316032, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81316753..81316759,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316753..81316759, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr3:127109563..127109564,-#_b4364cd1602019de0f43a767d8c3369a | p2@ENST00000488425, p2@uc003ejj.2 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:32150708..32150711,-#_b4364cd1602019de0f43a767d8c3369a | p7@AGER |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81374462..81374469,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81374462..81374469, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:85886515..85886520,-#_b4364cd1602019de0f43a767d8c3369a | p@chr2:85886515..85886520, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:85885348..85885355,-#_b4364cd1602019de0f43a767d8c3369a | p@chr2:85885348..85885355, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:22020994..22020998,+#_b4364cd1602019de0f43a767d8c3369a | p@chr8:22020994..22020998, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81374752..81374761,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81374752..81374761, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:22021454..22021463,+#_b4364cd1602019de0f43a767d8c3369a | p@chr8:22021454..22021463, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:85889234..85889238,-#_b4364cd1602019de0f43a767d8c3369a | p@chr2:85889234..85889238, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:23631651..23631656,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:23631651..23631656, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81316558..81316565,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316558..81316565, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:32148869..32148878,-#_b4364cd1602019de0f43a767d8c3369a | p@chr6:32148869..32148878, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:85894661..85894668,+#_b4364cd1602019de0f43a767d8c3369a | p@chr2:85894661..85894668, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:22020085..22020093,+#_b4364cd1602019de0f43a767d8c3369a | p12@SFTPC |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:22020196..22020202,+#_b4364cd1602019de0f43a767d8c3369a | p13@SFTPC |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:32149013..32149018,-#_b4364cd1602019de0f43a767d8c3369a | p@chr6:32149013..32149018, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81374819..81374828,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81374819..81374828, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:85886515..85886520,-#_b4364cd1602019de0f43a767d8c3369a | p@chr2:85886515..85886520, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81316041..81316047,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316041..81316047, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81316764..81316776,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316764..81316776, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:22021454..22021463,+#_b4364cd1602019de0f43a767d8c3369a | p@chr8:22021454..22021463, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81316023..81316032,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316023..81316032, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:22021482..22021493,+#_b4364cd1602019de0f43a767d8c3369a | p@chr8:22021482..22021493, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:85892885..85892890,-#_b4364cd1602019de0f43a767d8c3369a | p23@SFTPB |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81374462..81374469,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81374462..81374469, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:32149013..32149018,-#_b4364cd1602019de0f43a767d8c3369a | p@chr6:32149013..32149018, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81374313..81374327,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81374313..81374327, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:22021903..22021951,-#_b4364cd1602019de0f43a767d8c3369a | p@chr8:22021903..22021951, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81316910..81316917,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316910..81316917, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81316311..81316313,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316311..81316313, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:85894689..85894696,+#_b4364cd1602019de0f43a767d8c3369a | p@chr2:85894689..85894696, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:22021482..22021493,+#_b4364cd1602019de0f43a767d8c3369a | p@chr8:22021482..22021493, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:85892885..85892890,-#_b4364cd1602019de0f43a767d8c3369a | p23@SFTPB |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81374819..81374828,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81374819..81374828, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81316041..81316047,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316041..81316047, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:22020085..22020093,+#_b4364cd1602019de0f43a767d8c3369a | p12@SFTPC |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81315944..81315951,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81315944..81315951, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:22021903..22021951,-#_b4364cd1602019de0f43a767d8c3369a | p@chr8:22021903..22021951, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81374331..81374339,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81374331..81374339, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:85894689..85894696,+#_b4364cd1602019de0f43a767d8c3369a | p@chr2:85894689..85894696, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81374313..81374327,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81374313..81374327, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81316132..81316137,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316132..81316137, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81316910..81316917,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316910..81316917, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:117746871..117746882,-#_b4364cd1602019de0f43a767d8c3369a | p10@ROS1 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81374587..81374595,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81374587..81374595, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81316311..81316313,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316311..81316313, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:22021526..22021532,+#_b4364cd1602019de0f43a767d8c3369a | p@chr8:22021526..22021532, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:85892915..85892916,-#_b4364cd1602019de0f43a767d8c3369a | p40@SFTPB |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81316753..81316759,-#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81316753..81316759, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81374752..81374761,+#_b4364cd1602019de0f43a767d8c3369a | p@chr10:81374752..81374761, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:85894747..85894754,-#_bd96bd1d505d70f043b9cea613b68d24 | p@chr2:85894747..85894754, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr17:53690318..53690324,+#_bd96bd1d505d70f043b9cea613b68d24 | p@chr17:53690318..53690324, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr6:8358321..8358327,+#_bd96bd1d505d70f043b9cea613b68d24 | p@chr6:8358321..8358327, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:85893526..85893535,-#_bd96bd1d505d70f043b9cea613b68d24 | p@chr2:85893526..85893535, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr9:77257424..77257435,-#_bd96bd1d505d70f043b9cea613b68d24 | p@chr9:77257424..77257435, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:85886778..85886789,-#_bd96bd1d505d70f043b9cea613b68d24 | p@chr2:85886778..85886789, - |
