UBERON:0004874: Difference between revisions
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|located_in= | |located_in= | ||
|name=somatopleure | |name=somatopleure | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000922;;UBERON:0003081 | |part_of=UBERON:0000922;;UBERON:0003081 | ||
Latest revision as of 17:49, 12 September 2014
| Name: | somatopleure | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "a structure created during embryogenesis when the lateral mesoderm splits into two layers - the outer (or somatic) layer becomes applied to the inner surface of the ectoderm, and with it forms the somatopleure.[WP]." [Wikipedia:Somatopleure] | ||
| Xrefs: |
| ||
| Comments: | todo - check relationship to LPM |
200px-Gray16.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|---|
| part_of: | UBERON:0000922(embryo),UBERON:0003081(lateral plate mesoderm) |
Children
| develops from: | UBERON:0005876 (undifferentiated genital tubercle),UBERON:0005971 (amniotic fold) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004874 (somatopleure), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 9.37e-99 | FFCP PHASE1:Hg19::chr12:53068923..53068932,-#_d6f2aa2424d8b5b314d70794700be2bd | p@chr12:53068923..53068932, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr12:53068889..53068898,-#_d6f2aa2424d8b5b314d70794700be2bd | p@chr12:53068889..53068898, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr12:53068923..53068932,-#_d6f2aa2424d8b5b314d70794700be2bd | p@chr12:53068923..53068932, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr12:53068889..53068898,-#_d6f2aa2424d8b5b314d70794700be2bd | p@chr12:53068889..53068898, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr16:15811123..15811133,+#_a184d5d555081c98dc92ed57be71307b | p@chr16:15811123..15811133, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr9:79379348..79379360,+#_a184d5d555081c98dc92ed57be71307b | p1@PCA3 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr9:79379348..79379360,+#_a184d5d555081c98dc92ed57be71307b | p1@PCA3 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr5:59672718..59672753,-#_a184d5d555081c98dc92ed57be71307b | p@chr5:59672718..59672753, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr5:59672718..59672753,-#_a184d5d555081c98dc92ed57be71307b | p@chr5:59672718..59672753, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr8:72252453..72252458,-#_a184d5d555081c98dc92ed57be71307b | p@chr8:72252453..72252458, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr17:38976407..38976413,-#_a184d5d555081c98dc92ed57be71307b | p20@KRT10 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr8:72252453..72252458,-#_a184d5d555081c98dc92ed57be71307b | p@chr8:72252453..72252458, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr15:45803320..45803343,+#_a184d5d555081c98dc92ed57be71307b | p1@HMGN2P46 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr17:38975820..38975830,-#_a184d5d555081c98dc92ed57be71307b | p10@KRT10 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr16:15811123..15811133,+#_a184d5d555081c98dc92ed57be71307b | p@chr16:15811123..15811133, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr17:38976407..38976413,-#_a184d5d555081c98dc92ed57be71307b | p20@KRT10 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr6:110964453..110964459,-#_a184d5d555081c98dc92ed57be71307b | p16@CDK19 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr6:110964453..110964459,-#_a184d5d555081c98dc92ed57be71307b | p16@CDK19 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr17:38975820..38975830,-#_a184d5d555081c98dc92ed57be71307b | p10@KRT10 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr15:45803320..45803343,+#_a184d5d555081c98dc92ed57be71307b | p1@HMGN2P46 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr12:53068552..53068579,-#_908986a18bcc13f8b19e30e13cf9abc5 | p@chr12:53068552..53068579, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr14:74454889..74454892,-#_908986a18bcc13f8b19e30e13cf9abc5 | p10@ENTPD5 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr12:53068552..53068579,-#_908986a18bcc13f8b19e30e13cf9abc5 | p@chr12:53068552..53068579, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr14:74454889..74454892,-#_908986a18bcc13f8b19e30e13cf9abc5 | p10@ENTPD5 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr19:51517928..51517936,-#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p2@AK026045 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr17:38975850..38975854,-#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p19@KRT10 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:209545365..209545377,+#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p1@ENST00000447257 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr17:38978526..38978535,+#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p@chr17:38978526..38978535, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr17:33640639..33640650,+#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p@chr17:33640639..33640650, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:61416169..61416181,-#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p@chr1:61416169..61416181, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr19:51517928..51517936,-#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p2@AK026045 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr19:38664309..38664322,+#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p@chr19:38664309..38664322, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr4:186434325..186434339,-#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p@chr4:186434325..186434339, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr4:186434325..186434339,-#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p@chr4:186434325..186434339, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr17:33640639..33640650,+#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p@chr17:33640639..33640650, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:179399981..179399988,-#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p@chr2:179399981..179399988, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr17:38975796..38975805,-#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p13@KRT10 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr6:152585338..152585342,-#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p@chr6:152585338..152585342, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:209545365..209545377,+#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p1@ENST00000447257 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:179393635..179393640,-#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p167@TTN |
| 2.39e-66 | FFCP PHASE2:Hg19::chr19:38664309..38664322,+#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p@chr19:38664309..38664322, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:179399981..179399988,-#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p@chr2:179399981..179399988, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr17:38976909..38976919,-#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p@chr17:38976909..38976919, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr17:38975796..38975805,-#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p13@KRT10 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr6:152585338..152585342,-#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p@chr6:152585338..152585342, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:179393635..179393640,-#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p167@TTN |
| 2.39e-66 | FFCP PHASE2:Hg19::chr17:38976909..38976919,-#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p@chr17:38976909..38976919, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr17:38975850..38975854,-#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p19@KRT10 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:61416169..61416181,-#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p@chr1:61416169..61416181, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr17:38978526..38978535,+#_3cfbe1c4c3cec0cf7ab576c7ede39363 | p@chr17:38978526..38978535, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr16:34571309..34571314,-#_36943c388a272381c66ca54920de4d50 | p@chr16:34571309..34571314, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr5:66771311..66771320,-#_36943c388a272381c66ca54920de4d50 | p2@ENST00000508512 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr5:66771311..66771320,-#_36943c388a272381c66ca54920de4d50 | p2@ENST00000508512 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr10:94301107..94301111,-#_36943c388a272381c66ca54920de4d50 | p18@IDE |
| 4.66e-66 | FFCP PHASE2:Hg19::chr2:179542558..179542568,-#_36943c388a272381c66ca54920de4d50 | p@chr2:179542558..179542568, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr2:152520302..152520308,-#_36943c388a272381c66ca54920de4d50 | p@chr2:152520302..152520308, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr16:34571309..34571314,-#_36943c388a272381c66ca54920de4d50 | p@chr16:34571309..34571314, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr2:152520302..152520308,-#_36943c388a272381c66ca54920de4d50 | p@chr2:152520302..152520308, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr2:152520333..152520340,-#_36943c388a272381c66ca54920de4d50 | p@chr2:152520333..152520340, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr2:152548420..152548425,-#_36943c388a272381c66ca54920de4d50 | p@chr2:152548420..152548425, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr2:75869014..75869047,+#_36943c388a272381c66ca54920de4d50 | p@chr2:75869014..75869047, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr3:52875783..52875812,-#_36943c388a272381c66ca54920de4d50 | p7@TMEM110 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr13:103555720..103555725,+#_36943c388a272381c66ca54920de4d50 | p@chr13:103555720..103555725, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr2:152520333..152520340,-#_36943c388a272381c66ca54920de4d50 | p@chr2:152520333..152520340, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr2:152548420..152548425,-#_36943c388a272381c66ca54920de4d50 | p@chr2:152548420..152548425, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr2:75869014..75869047,+#_36943c388a272381c66ca54920de4d50 | p@chr2:75869014..75869047, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr10:94301107..94301111,-#_36943c388a272381c66ca54920de4d50 | p18@IDE |
| 4.66e-66 | FFCP PHASE2:Hg19::chr3:52875783..52875812,-#_36943c388a272381c66ca54920de4d50 | p7@TMEM110 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr2:179542558..179542568,-#_36943c388a272381c66ca54920de4d50 | p@chr2:179542558..179542568, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr13:103555720..103555725,+#_36943c388a272381c66ca54920de4d50 | p@chr13:103555720..103555725, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr17:4448859..4448864,-#_6a7a31795eddb90cab7720e7ab3d2ca1 | p@chr17:4448859..4448864, - |
| 1.46e-50 | FFCP PHASE1:Hg19::chr2:178753478..178753487,-#_6a7a31795eddb90cab7720e7ab3d2ca1 | p10@PDE11A |
| 1.46e-50 | FFCP PHASE2:Hg19::chr17:4448859..4448864,-#_6a7a31795eddb90cab7720e7ab3d2ca1 | p@chr17:4448859..4448864, - |
| 1.46e-50 | FFCP PHASE2:Hg19::chr2:178753478..178753487,-#_6a7a31795eddb90cab7720e7ab3d2ca1 | p10@PDE11A |
| 2.42e-50 | FFCP PHASE2:Hg19::chr2:170783857..170783860,+#_9f7593684fe03c90da39c17e12e9530a | p@chr2:170783857..170783860, + |
| 2.42e-50 | FFCP PHASE2:Hg19::chr16:56598984..56598990,+#_9f7593684fe03c90da39c17e12e9530a | p1@MT4 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr20:33451327..33451358,-#_9f7593684fe03c90da39c17e12e9530a | p4@GGT7 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr2:152554090..152554096,-#_9f7593684fe03c90da39c17e12e9530a | p@chr2:152554090..152554096, - |
| 2.42e-50 | FFCP PHASE1:Hg19::chr10:71351909..71351911,+#_9f7593684fe03c90da39c17e12e9530a | p@chr10:71351909..71351911, + |
| 2.42e-50 | FFCP PHASE2:Hg19::chr10:71351909..71351911,+#_9f7593684fe03c90da39c17e12e9530a | p@chr10:71351909..71351911, + |
| 2.42e-50 | FFCP PHASE2:Hg19::chr2:152554090..152554096,-#_9f7593684fe03c90da39c17e12e9530a | p@chr2:152554090..152554096, - |
| 2.42e-50 | FFCP PHASE1:Hg19::chr16:56598984..56598990,+#_9f7593684fe03c90da39c17e12e9530a | p1@MT4 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr17:10421962..10421969,-#_9f7593684fe03c90da39c17e12e9530a | p2@MYH1 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr2:170783857..170783860,+#_9f7593684fe03c90da39c17e12e9530a | p@chr2:170783857..170783860, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr20:33451327..33451358,-#_9f7593684fe03c90da39c17e12e9530a | p4@GGT7 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr10:15646574..15646578,-#_9f7593684fe03c90da39c17e12e9530a | p11@ITGA8 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr17:10421962..10421969,-#_9f7593684fe03c90da39c17e12e9530a | p2@MYH1 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr10:15646574..15646578,-#_9f7593684fe03c90da39c17e12e9530a | p11@ITGA8 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr1:152483278..152483280,+#_4fffb60cbbf5aa2aab13d1f5359ca785 | p1@LCE5A |
| 3.99e-50 | FFCP PHASE1:Hg19::chr16:15865517..15865522,-#_4fffb60cbbf5aa2aab13d1f5359ca785 | p@chr16:15865517..15865522, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr2:152534162..152534168,-#_4fffb60cbbf5aa2aab13d1f5359ca785 | p@chr2:152534162..152534168, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr12:10856739..10856746,-#_4fffb60cbbf5aa2aab13d1f5359ca785 | p36@CSDA |
| 3.99e-50 | FFCP PHASE2:Hg19::chr2:152409955..152409964,-#_4fffb60cbbf5aa2aab13d1f5359ca785 | p@chr2:152409955..152409964, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr1:152483278..152483280,+#_4fffb60cbbf5aa2aab13d1f5359ca785 | p1@LCE5A |
| 3.99e-50 | FFCP PHASE1:Hg19::chr2:179399074..179399079,-#_4fffb60cbbf5aa2aab13d1f5359ca785 | p@chr2:179399074..179399079, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr5:66771335..66771342,-#_4fffb60cbbf5aa2aab13d1f5359ca785 | p3@ENST00000508512 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr5:66771335..66771342,-#_4fffb60cbbf5aa2aab13d1f5359ca785 | p3@ENST00000508512 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr17:38976882..38976895,-#_4fffb60cbbf5aa2aab13d1f5359ca785 | p@chr17:38976882..38976895, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr2:179399074..179399079,-#_4fffb60cbbf5aa2aab13d1f5359ca785 | p@chr2:179399074..179399079, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr2:152393727..152393736,-#_4fffb60cbbf5aa2aab13d1f5359ca785 | p@chr2:152393727..152393736, - |
