UBERON:0004710: Difference between revisions
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|located_in= | |located_in= | ||
|name=pectoral appendage | |name=pectoral appendage | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0010708 | |part_of=UBERON:0010708 | ||
Latest revision as of 17:47, 12 September 2014
| Name: | pectoral appendage | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Paired appendage that consists of the anterior appendicular skeleton and associated soft and hard tissues, but excludes the pectoral girdle and its associated soft and hard tissues." [VSAO:0000150-modified] | ||
| Xrefs: |
| ||
| Synonyms: |
"anterior limb/fin" EXACT [UBERON:cjm] "anterior paired appendage" EXACT [VSAO:0000148] "forelimb or pectoral fin" EXACT [UBERON:cjm] "forelimb/pectoral fin" EXACT [UBERON:cjm] "pectoral limb/fin" EXACT [UBERON:cjm] | ||
| Alt_id: | UBERON:0009875 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004708(paired limb/fin) |
|---|---|
| develops_from: | UBERON:0005419(pectoral appendage bud) |
| part_of: | UBERON:0010708(pectoral complex) |
Children
| is a: | UBERON:0002102 (forelimb) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10232-103I7 (chicken wing buds, day03 (HH20))
- 10286-104F7 (Skin - palm, donor1)
- 10314-104I8
- 10342-105C9
- 1517-43C4 (forelimb, embryo E17)
- 1520-43B5 (forelimb, embryo E18)
- 335-25E2 (forelimb, embryo E11)
- 359-14H2 (forelimb, embryo E12)
- 384-1E2 (forelimb, embryo E13)
- 413-26A8 (forelimb, embryo E14)
... further results Mouse (Mus musculus)
- 10232-103I7 (chicken wing buds, day03 (HH20))
- 10286-104F7 (Skin - palm, donor1)
- 10314-104I8
- 10342-105C9
- 1517-43C4 (forelimb, embryo E17)
- 1520-43B5 (forelimb, embryo E18)
- 335-25E2 (forelimb, embryo E11)
- 359-14H2 (forelimb, embryo E12)
- 384-1E2 (forelimb, embryo E13)
- 413-26A8 (forelimb, embryo E14)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004710 (pectoral appendage), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.33e-86 | FFCP PHASE2:Mm9::chr2:74499300..74499309,-#_f3fc1278997ff05820f8c284bbf48e31 | p5@Evx2 |
| 1.33e-86 | FFCP PHASE1:Mm9::chr2:74499300..74499309,-#_f3fc1278997ff05820f8c284bbf48e31 | p5@Evx2 |
| 2.4e-74 | FFCP PHASE1:Mm9::chr2:165983686..165983720,-#_a9b75534f9f02807e43edc645c410f7d | p@chr2:165983686..165983720, - |
| 2.4e-74 | FFCP PHASE2:Mm9::chr5:120256413..120256428,-#_a9b75534f9f02807e43edc645c410f7d | p@chr5:120256413..120256428, - |
| 2.4e-74 | FFCP PHASE1:Mm9::chr15:51484092..51484121,-#_a9b75534f9f02807e43edc645c410f7d | p@chr15:51484092..51484121, - |
| 2.4e-74 | FFCP PHASE1:Mm9::chr5:120256413..120256428,-#_a9b75534f9f02807e43edc645c410f7d | p@chr5:120256413..120256428, - |
| 2.4e-74 | FFCP PHASE2:Mm9::chr15:51484092..51484121,-#_a9b75534f9f02807e43edc645c410f7d | p@chr15:51484092..51484121, - |
| 2.4e-74 | FFCP PHASE2:Mm9::chr2:165983686..165983720,-#_a9b75534f9f02807e43edc645c410f7d | p@chr2:165983686..165983720, - |
| 1.21e-61 | FFCP PHASE1:Mm9::chr2:74505324..74505330,+#_e12ad67bd979ced8661128306238dc70 | p@chr2:74505324..74505330, + |
| 1.21e-61 | FFCP PHASE2:Mm9::chr2:74505324..74505330,+#_e12ad67bd979ced8661128306238dc70 | p@chr2:74505324..74505330, + |
| 2.24e-61 | FFCP PHASE1:Mm9::chr2:74506264..74506286,+#_1dadfcb38e3ddcd5439899bde52f0b7b | p1@Hoxd13 |
| 2.24e-61 | FFCP PHASE2:Mm9::chr2:74506264..74506286,+#_1dadfcb38e3ddcd5439899bde52f0b7b | p1@Hoxd13 |
| 3.63e-52 | FFCP PHASE2:Mm9::chr2:74513064..74513089,+#_38ca264bf3b6ff421da3b30ce082c2c2 | p2@Hoxd12 |
| 3.63e-52 | FFCP PHASE1:Mm9::chr2:74513064..74513089,+#_38ca264bf3b6ff421da3b30ce082c2c2 | p2@Hoxd12 |
| 4.62e-52 | FFCP PHASE2:Mm9::chr2:74499251..74499258,-#_e9ecad09dace762a5be2569f720fb0f2 | p4@Evx2 |
| 4.62e-52 | FFCP PHASE1:Mm9::chr2:74499251..74499258,-#_e9ecad09dace762a5be2569f720fb0f2 | p4@Evx2 |
| 5.88e-52 | FFCP PHASE2:Mm9::chr2:33574246..33574257,-#_86eebdf14bca0b3e4fdfc4d08e2273e8 | p3@ENSMUST00000130532 |
| 5.88e-52 | FFCP PHASE1:Mm9::chr2:33574246..33574257,-#_86eebdf14bca0b3e4fdfc4d08e2273e8 | p3@ENSMUST00000130532 |
| 5.28e-50 | FFCP PHASE2:Mm9::chr2:74521516..74521525,+#_e2678c6ab9851c43fecf37a07bcd1090 | p1@ENSMUST00000136302 |
| 5.28e-50 | FFCP PHASE1:Mm9::chr2:74521516..74521525,+#_e2678c6ab9851c43fecf37a07bcd1090 | p1@ENSMUST00000136302 |
| 9.21e-50 | FFCP PHASE1:Mm9::chr6:51009701..51009744,-#_d396aca56a7256050d8b85bc4b41bc0d | p@chr6:51009701..51009744, - |
| 9.21e-50 | FFCP PHASE2:Mm9::chr6:51009701..51009744,-#_d396aca56a7256050d8b85bc4b41bc0d | p@chr6:51009701..51009744, - |
| 2.92e-48 | FFCP PHASE2:Mm9::chr10:97069737..97069749,+#_932b4a69adc874765a5fdf22ba2d47f4 | p5@Kera |
| 2.92e-48 | FFCP PHASE1:Mm9::chr10:97069737..97069749,+#_932b4a69adc874765a5fdf22ba2d47f4 | p5@Kera |
| 4.71e-48 | FFCP PHASE1:Mm9::chr6:52210816..52210831,-#_0e1141fe827992c0324626ea752f05df | p2@Hoxa13 |
| 4.71e-48 | FFCP PHASE2:Mm9::chr6:52210816..52210831,-#_0e1141fe827992c0324626ea752f05df | p2@Hoxa13 |
| 6.47e-48 | FFCP PHASE1:Mm9::chr2:74513149..74513159,+#_f1d3d07ca67af58a397fc761d840be72 | p@chr2:74513149..74513159, + |
| 6.47e-48 | FFCP PHASE2:Mm9::chr2:74513149..74513159,+#_f1d3d07ca67af58a397fc761d840be72 | p@chr2:74513149..74513159, + |
| 1.4e-44 | FFCP PHASE2:Mm9::chr1:165288513..165288518,+#_1ba3bee15d028014d34f0691fec59225 | p@chr1:165288513..165288518, + |
| 1.4e-44 | FFCP PHASE1:Mm9::chr1:165288513..165288518,+#_1ba3bee15d028014d34f0691fec59225 | p@chr1:165288513..165288518, + |
| 2.07e-41 | FFCP PHASE1:Mm9::chr1:164064835..164064864,-#_5ca58aba4032cc11b5042bc2d9c4e285 | p3@Dnm3 |
| 2.07e-41 | FFCP PHASE2:Mm9::chr1:164064835..164064864,-#_5ca58aba4032cc11b5042bc2d9c4e285 | p3@Dnm3 |
| 2.91e-40 | FFCP PHASE2:Mm9::chr2:33574267..33574279,-#_0cb7eec00aa54ff2bf8725c25bdc41a0 | p1@ENSMUST00000130532 |
| 2.91e-40 | FFCP PHASE1:Mm9::chr2:33574267..33574279,-#_0cb7eec00aa54ff2bf8725c25bdc41a0 | p1@ENSMUST00000130532 |
| 3.67e-40 | FFCP PHASE2:Mm9::chr2:33574309..33574319,-#_8cba2b82c1bd806b5c45ef63490f376a | p4@ENSMUST00000130532 |
| 3.67e-40 | FFCP PHASE1:Mm9::chr2:33574309..33574319,-#_8cba2b82c1bd806b5c45ef63490f376a | p4@ENSMUST00000130532 |
| 5.46e-39 | FFCP PHASE2:Mm9::chr6:52195000..52195013,+#_d279868b896f1a01c9147ad26f572dbf | p3@Hoxa11as |
| 5.46e-39 | FFCP PHASE1:Mm9::chr6:52195000..52195013,+#_d279868b896f1a01c9147ad26f572dbf | p3@Hoxa11as |
| 6.59e-38 | FFCP PHASE2:Mm9::chr2:74512009..74512012,+#_403aee2ce6660f176d38181b3bdfbad4 | p@chr2:74512009..74512012, + |
| 6.59e-38 | FFCP PHASE1:Mm9::chr2:74512009..74512012,+#_403aee2ce6660f176d38181b3bdfbad4 | p@chr2:74512009..74512012, + |
| 1.94e-35 | FFCP PHASE2:Mm9::chr2:33496847..33496857,+#_626dde70e54a76aa3893d64c5764154a | p3@ENSMUST00000147294, p3@uc008jia.1 |
| 1.94e-35 | FFCP PHASE1:Mm9::chr2:33496847..33496857,+#_626dde70e54a76aa3893d64c5764154a | p3@ENSMUST00000147294, p3@uc008jia.1 |
| 9.74e-35 | FFCP PHASE1:Mm9::chr13:89680110..89680115,+#_f5692006ae3ffb7b217308f85be26d50 | p6@Hapln1 |
| 9.74e-35 | FFCP PHASE2:Mm9::chr13:89680110..89680115,+#_f5692006ae3ffb7b217308f85be26d50 | p6@Hapln1 |
| 2.95e-34 | FFCP PHASE2:Mm9::chr9:96754986..96754989,-#_42700e223f58814c1ba00e2912fc0209 | p3@Acpl2 |
| 2.95e-34 | FFCP PHASE1:Mm9::chr9:96754986..96754989,-#_42700e223f58814c1ba00e2912fc0209 | p3@Acpl2 |
| 6.28e-34 | FFCP PHASE2:Mm9::chr8:23734491..23734495,+#_0c26bafdaca3a1a6e23df6326a5129aa | p1@Dkk4 |
| 6.28e-34 | FFCP PHASE1:Mm9::chr8:23734491..23734495,+#_0c26bafdaca3a1a6e23df6326a5129aa | p1@Dkk4 |
| 7.62e-34 | FFCP PHASE1:Mm9::chr2:155770985..155770995,-#_351817ad6d439a8d4b04baccf4d6b93b | p2@Gdf5 |
| 7.62e-34 | FFCP PHASE2:Mm9::chr2:155770985..155770995,-#_351817ad6d439a8d4b04baccf4d6b93b | p2@Gdf5 |
| 2.0e-33 | FFCP PHASE2:Mm9::chr18:80910310..80910329,-#_411ea2324cc943fb3d39205b3e983ee4 | p@chr18:80910310..80910329, - |
| 2.0e-33 | FFCP PHASE1:Mm9::chr18:80910310..80910329,-#_411ea2324cc943fb3d39205b3e983ee4 | p@chr18:80910310..80910329, - |
| 1.89e-32 | FFCP PHASE2:Mm9::chr6:52210774..52210787,-#_9509b0c207badfca9da1bacfde24f530 | p1@Hoxa13 |
| 1.89e-32 | FFCP PHASE1:Mm9::chr6:52210774..52210787,-#_9509b0c207badfca9da1bacfde24f530 | p1@Hoxa13 |
| 6.43e-32 | FFCP PHASE2:Mm9::chr2:33498116..33498124,+#_f6fa0fe8b7bc1f591049ac6032a46746 | p@chr2:33498116..33498124, + |
| 6.43e-32 | FFCP PHASE1:Mm9::chr2:33498116..33498124,+#_f6fa0fe8b7bc1f591049ac6032a46746 | p@chr2:33498116..33498124, + |
| 7.44e-32 | FFCP PHASE2:Mm9::chr2:33496574..33496588,+#_88ad38bee480798929a12c22eb216c48 | p4@ENSMUST00000152118, p4@uc008jhz.1 |
| 7.44e-32 | FFCP PHASE1:Mm9::chr2:33496574..33496588,+#_88ad38bee480798929a12c22eb216c48 | p4@ENSMUST00000152118, p4@uc008jhz.1 |
| 1.09e-30 | FFCP PHASE2:Mm9::chr2:74520075..74520087,+#_2e1103999324d0e55e16fdc9a0d8c82a | p6@Hoxd11 |
| 1.09e-30 | FFCP PHASE1:Mm9::chr2:74520075..74520087,+#_2e1103999324d0e55e16fdc9a0d8c82a | p6@Hoxd11 |
| 2.22e-30 | FFCP PHASE2:Mm9::chr12:34649201..34649205,+#_4194588808742fc230fe86cea638eaa6 | p@chr12:34649201..34649205, + |
| 2.22e-30 | FFCP PHASE1:Mm9::chr12:34649201..34649205,+#_4194588808742fc230fe86cea638eaa6 | p@chr12:34649201..34649205, + |
| 1.6e-29 | FFCP PHASE2:Mm9::chr5:120285104..120285113,+#_854b1406e1531f3506f0e0c0c63bd6b5 | p5@Tbx5 |
| 1.6e-29 | FFCP PHASE1:Mm9::chr5:120285104..120285113,+#_854b1406e1531f3506f0e0c0c63bd6b5 | p5@Tbx5 |
| 4.13e-29 | FFCP PHASE1:Mm9::chr5:120246556..120246565,+#_1eb0ffc0cdf62d1e74395052bd865500 | p@chr5:120246556..120246565, + |
| 4.13e-29 | FFCP PHASE2:Mm9::chr5:120246556..120246565,+#_1eb0ffc0cdf62d1e74395052bd865500 | p@chr5:120246556..120246565, + |
| 4.91e-29 | FFCP PHASE2:Mm9::chr5:120246522..120246553,+#_6b060c45e62b1f1181b63eceee8d34b4 | p@chr5:120246522..120246553, + |
| 4.91e-29 | FFCP PHASE1:Mm9::chr5:120246522..120246553,+#_6b060c45e62b1f1181b63eceee8d34b4 | p@chr5:120246522..120246553, + |
| 5.59e-29 | FFCP PHASE2:Mm9::chr16:77329743..77329754,+#_a2d104b13fc030e718e1b449e7defd64 | p14@2810055G20Rik |
| 5.59e-29 | FFCP PHASE1:Mm9::chr16:77329743..77329754,+#_a2d104b13fc030e718e1b449e7defd64 | p14@2810055G20Rik |
| 8.27e-29 | FFCP PHASE1:Mm9::chr3:29912310..29912321,-#_e8caa4056c8ea296e1a0fddc8753f789 | p23@Mecom |
| 8.27e-29 | FFCP PHASE2:Mm9::chr3:29912310..29912321,-#_e8caa4056c8ea296e1a0fddc8753f789 | p23@Mecom |
| 6.5e-28 | FFCP PHASE2:Mm9::chr3:99044251..99044260,+#_a5076fab33eb5de42bf0eb259aba27fa | p8@Tbx15 |
| 6.5e-28 | FFCP PHASE1:Mm9::chr3:99044251..99044260,+#_a5076fab33eb5de42bf0eb259aba27fa | p8@Tbx15 |
| 3.95e-27 | FFCP PHASE1:Mm9::chr15:97807283..97807309,-#_6a8e429ab5d7225540ed648bdda31781 | p@chr15:97807283..97807309, - |
| 3.95e-27 | FFCP PHASE2:Mm9::chr15:97807283..97807309,-#_6a8e429ab5d7225540ed648bdda31781 | p@chr15:97807283..97807309, - |
| 5.23e-27 | FFCP PHASE1:Mm9::chr1:165244244..165244254,-#_83f04a7f05e15f7f04eaed347182e974 | p8@Prrx1 |
| 5.23e-27 | FFCP PHASE2:Mm9::chr1:165244244..165244254,-#_83f04a7f05e15f7f04eaed347182e974 | p8@Prrx1 |
| 1.4e-26 | FFCP PHASE2:Mm9::chr5:42155277..42155281,-#_1525b295f1429b026d61a44dc5d97e17 | p2@Nkx3-2 |
| 1.4e-26 | FFCP PHASE1:Mm9::chr5:42155277..42155281,-#_1525b295f1429b026d61a44dc5d97e17 | p2@Nkx3-2 |
| 1.64e-26 | FFCP PHASE2:Mm9::chr16:95807232..95807250,-#_e3b4fc4f43df36fcb1376753c233de0f | p@chr16:95807232..95807250, - |
| 1.64e-26 | FFCP PHASE1:Mm9::chr16:95807232..95807250,-#_e3b4fc4f43df36fcb1376753c233de0f | p@chr16:95807232..95807250, - |
| 7.57e-26 | FFCP PHASE1:Mm9::chr3:86116124..86116132,+#_a6ebdaa5b9d155c657c9eb060b3f95df | p@chr3:86116124..86116132, + |
| 7.57e-26 | FFCP PHASE1:Mm9::chr4:125973415..125973418,+#_a6ebdaa5b9d155c657c9eb060b3f95df | p@chr4:125973415..125973418, + |
| 7.57e-26 | FFCP PHASE2:Mm9::chr3:86116124..86116132,+#_a6ebdaa5b9d155c657c9eb060b3f95df | p@chr3:86116124..86116132, + |
| 7.57e-26 | FFCP PHASE2:Mm9::chr4:125973415..125973418,+#_a6ebdaa5b9d155c657c9eb060b3f95df | p@chr4:125973415..125973418, + |
| 7.57e-26 | FFCP PHASE2:Mm9::chr3:37606335..37606337,-#_a6ebdaa5b9d155c657c9eb060b3f95df | p@chr3:37606335..37606337, - |
| 7.57e-26 | FFCP PHASE1:Mm9::chr3:37606335..37606337,-#_a6ebdaa5b9d155c657c9eb060b3f95df | p@chr3:37606335..37606337, - |
| 1.07e-25 | FFCP PHASE1:Mm9::chr17:68300324..68300336,-#_0de285f8539d4db722a016b35fd48b23 | p5@Arhgap28 |
| 1.07e-25 | FFCP PHASE2:Mm9::chr17:68300324..68300336,-#_0de285f8539d4db722a016b35fd48b23 | p5@Arhgap28 |
| 2.33e-25 | FFCP PHASE1:Mm9::chr7:75096968..75096978,+#_0b2109215d94941453f538911fbf83d5 | p9@Igf1r |
| 2.33e-25 | FFCP PHASE2:Mm9::chr7:75096968..75096978,+#_0b2109215d94941453f538911fbf83d5 | p9@Igf1r |
| 2.93e-25 | FFCP PHASE2:Mm9::chr15:101936581..101936594,+#_ab274cb5e76ac2f9dd228247ef9cef4d | p@chr15:101936581..101936594, + |
| 2.93e-25 | FFCP PHASE1:Mm9::chr15:101936581..101936594,+#_ab274cb5e76ac2f9dd228247ef9cef4d | p@chr15:101936581..101936594, + |
| 2.99e-25 | FFCP PHASE2:Mm9::chr17:23882313..23882330,-#_0c06fd019dc1ec668289e1e4ee1a81a7 | p@chr17:23882313..23882330, - |
| 2.99e-25 | FFCP PHASE1:Mm9::chr17:23882313..23882330,-#_0c06fd019dc1ec668289e1e4ee1a81a7 | p@chr17:23882313..23882330, - |
| 3.52e-25 | FFCP PHASE2:Mm9::chr2:155771018..155771042,-#_815cd831244990681426dffe5a9ca7a5 | p1@Gdf5 |
| 3.52e-25 | FFCP PHASE1:Mm9::chr2:155771018..155771042,-#_815cd831244990681426dffe5a9ca7a5 | p1@Gdf5 |
| 2.77e-24 | FFCP PHASE1:Mm9::chr15:77137392..77137399,-#_c0856858325b84109e4826767256b003 | p16@Rbfox2 |
| 2.77e-24 | FFCP PHASE2:Mm9::chr15:77137392..77137399,-#_c0856858325b84109e4826767256b003 | p16@Rbfox2 |
