Personal tools

DOID:4549: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 13: Line 13:
|located_in=
|located_in=
|name=extraosseous chondrosarcoma
|name=extraosseous chondrosarcoma
|namespace=disease_ontology
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=
|part_of=

Latest revision as of 16:51, 12 September 2014

Name:extraosseous chondrosarcoma
Namespace:FANTOM
Xrefs:
links:
UMLS_CUI:C0855048

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:3371(chondrosarcoma)



Children


is a:DOID:6496 (extraskeletal myxoid chondrosarcoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

  • 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)

Mouse (Mus musculus)

  • 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:4549 (extraosseous chondrosarcoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr12:79920595..79920605,-#_1147d109bbe9988c7b81794ecc261253p@chr12:79920595..79920605, -
5.42e-195FFCP PHASE1:Hg19::chr6:152592460..152592465,-#_1147d109bbe9988c7b81794ecc261253p@chr6:152592460..152592465, -
5.42e-195FFCP PHASE1:Hg19::chr2:175629357..175629367,-#_1147d109bbe9988c7b81794ecc261253p6@CHRNA1
5.42e-195FFCP PHASE2:Hg19::chr3:2140234..2140235,+#_1147d109bbe9988c7b81794ecc261253p36@CNTN4
5.42e-195FFCP PHASE2:Hg19::chr1:228806586..228806591,+#_1147d109bbe9988c7b81794ecc261253p@chr1:228806586..228806591, +
5.42e-195FFCP PHASE2:Hg19::chr13:23733790..23733815,-#_1147d109bbe9988c7b81794ecc261253p@chr13:23733790..23733815, -
5.42e-195FFCP PHASE1:Hg19::chr10:63700017..63700022,+#_1147d109bbe9988c7b81794ecc261253p@chr10:63700017..63700022, +
5.42e-195FFCP PHASE2:Hg19::chr4:145101707..145101712,+#_1147d109bbe9988c7b81794ecc261253p@chr4:145101707..145101712, +
5.42e-195FFCP PHASE2:Hg19::chr3:157230582..157230593,+#_1147d109bbe9988c7b81794ecc261253p@chr3:157230582..157230593, +
5.42e-195FFCP PHASE2:Hg19::chr1:192407901..192407907,-#_1147d109bbe9988c7b81794ecc261253p@chr1:192407901..192407907, -
5.42e-195FFCP PHASE2:Hg19::chr19:41281630..41281644,+#_1147d109bbe9988c7b81794ecc261253p6@RAB4B
5.42e-195FFCP PHASE1:Hg19::chr7:18439510..18439521,+#_1147d109bbe9988c7b81794ecc261253p@chr7:18439510..18439521, +
5.42e-195FFCP PHASE1:Hg19::chr6:152589315..152589320,-#_1147d109bbe9988c7b81794ecc261253p72@SYNE1
5.42e-195FFCP PHASE1:Hg19::chr3:157230506..157230511,+#_1147d109bbe9988c7b81794ecc261253p@chr3:157230506..157230511, +
5.42e-195FFCP PHASE1:Hg19::chr1:192407879..192407891,-#_1147d109bbe9988c7b81794ecc261253p@chr1:192407879..192407891, -
5.42e-195FFCP PHASE1:Hg19::chr10:33244302..33244305,-#_1147d109bbe9988c7b81794ecc261253p@chr10:33244302..33244305, -
5.42e-195FFCP PHASE2:Hg19::chr5:128083909..128083918,+#_1147d109bbe9988c7b81794ecc261253p@chr5:128083909..128083918, +
5.42e-195FFCP PHASE1:Hg19::chr3:2140207..2140208,+#_1147d109bbe9988c7b81794ecc261253p34@CNTN4
5.42e-195FFCP PHASE1:Hg19::chr1:145471703..145471706,+#_1147d109bbe9988c7b81794ecc261253p@chr1:145471703..145471706, +
5.42e-195FFCP PHASE1:Hg19::chr13:23733790..23733815,-#_1147d109bbe9988c7b81794ecc261253p@chr13:23733790..23733815, -
5.42e-195FFCP PHASE2:Hg19::chr7:80080929..80080934,+#_1147d109bbe9988c7b81794ecc261253p@chr7:80080929..80080934, +
5.42e-195FFCP PHASE2:Hg19::chr2:188420470..188420480,+#_1147d109bbe9988c7b81794ecc261253p@chr2:188420470..188420480, +
5.42e-195FFCP PHASE2:Hg19::chr4:169935485..169935488,-#_1147d109bbe9988c7b81794ecc261253p@chr4:169935485..169935488, -
5.42e-195FFCP PHASE2:Hg19::chr3:177555440..177555446,-#_1147d109bbe9988c7b81794ecc261253p@chr3:177555440..177555446, -
5.42e-195FFCP PHASE2:Hg19::chr1:197886803..197886812,+#_1147d109bbe9988c7b81794ecc261253p7@LHX9
5.42e-195FFCP PHASE2:Hg19::chr19:56047661..56047668,-#_1147d109bbe9988c7b81794ecc261253p4@SBK2
5.42e-195FFCP PHASE2:Hg19::chr3:2141888..2141892,-#_1147d109bbe9988c7b81794ecc261253p@chr3:2141888..2141892, -
5.42e-195FFCP PHASE2:Hg19::chr18:22251696..22251702,-#_1147d109bbe9988c7b81794ecc261253p@chr18:22251696..22251702, -
5.42e-195FFCP PHASE1:Hg19::chr2:188420455..188420469,+#_1147d109bbe9988c7b81794ecc261253p@chr2:188420455..188420469, +
5.42e-195FFCP PHASE2:Hg19::chr6:152589396..152589401,-#_1147d109bbe9988c7b81794ecc261253p68@SYNE1
5.42e-195FFCP PHASE2:Hg19::chr18:74961699..74961708,+#_1147d109bbe9988c7b81794ecc261253p5@GALR1
5.42e-195FFCP PHASE2:Hg19::chr14:83319766..83319776,-#_1147d109bbe9988c7b81794ecc261253p@chr14:83319766..83319776, -
5.42e-195FFCP PHASE1:Hg19::chr9:79634044..79634053,-#_1147d109bbe9988c7b81794ecc261253p@chr9:79634044..79634053, -
5.42e-195FFCP PHASE1:Hg19::chr18:74535969..74535980,-#_1147d109bbe9988c7b81794ecc261253p@chr18:74535969..74535980, -
5.42e-195FFCP PHASE2:Hg19::chr2:206927691..206927699,-#_1147d109bbe9988c7b81794ecc261253p@chr2:206927691..206927699, -
5.42e-195FFCP PHASE1:Hg19::chr14:83319766..83319776,-#_1147d109bbe9988c7b81794ecc261253p@chr14:83319766..83319776, -
5.42e-195FFCP PHASE2:Hg19::chr1:154942376..154942386,-#_1147d109bbe9988c7b81794ecc261253p@chr1:154942376..154942386, -
5.42e-195FFCP PHASE1:Hg19::chr18:22251681..22251685,-#_1147d109bbe9988c7b81794ecc261253p@chr18:22251681..22251685, -
5.42e-195FFCP PHASE2:Hg19::chr2:175614951..175614956,-#_1147d109bbe9988c7b81794ecc261253p@chr2:175614951..175614956, -
5.42e-195FFCP PHASE2:Hg19::chr8:107074411..107074421,+#_1147d109bbe9988c7b81794ecc261253p@chr8:107074411..107074421, +
5.42e-195FFCP PHASE2:Hg19::chr3:1577559..1577577,-#_1147d109bbe9988c7b81794ecc261253p@chr3:1577559..1577577, -
5.42e-195FFCP PHASE1:Hg19::chr11:30252646..30252648,+#_1147d109bbe9988c7b81794ecc261253p@chr11:30252646..30252648, +
5.42e-195FFCP PHASE2:Hg19::chr2:190023542..190023552,-#_1147d109bbe9988c7b81794ecc261253p@chr2:190023542..190023552, -
5.42e-195FFCP PHASE2:Hg19::chr10:54786954..54786965,-#_1147d109bbe9988c7b81794ecc261253p@chr10:54786954..54786965, -
5.42e-195FFCP PHASE2:Hg19::chr6:150735014..150735021,-#_1147d109bbe9988c7b81794ecc261253p@chr6:150735014..150735021, -
5.42e-195FFCP PHASE2:Hg19::chr3:2139856..2139863,+#_1147d109bbe9988c7b81794ecc261253p@chr3:2139856..2139863, +
5.42e-195FFCP PHASE1:Hg19::chr3:1577545..1577547,-#_1147d109bbe9988c7b81794ecc261253p@chr3:1577545..1577547, -
5.42e-195FFCP PHASE1:Hg19::chr2:206927652..206927658,-#_1147d109bbe9988c7b81794ecc261253p@chr2:206927652..206927658, -
5.42e-195FFCP PHASE1:Hg19::chr9:18993581..18993586,-#_1147d109bbe9988c7b81794ecc261253p@chr9:18993581..18993586, -
5.42e-195FFCP PHASE2:Hg19::chr9:13006722..13006729,-#_1147d109bbe9988c7b81794ecc261253p@chr9:13006722..13006729, -
5.42e-195FFCP PHASE2:Hg19::chr4:139817573..139817580,-#_1147d109bbe9988c7b81794ecc261253p@chr4:139817573..139817580, -
5.42e-195FFCP PHASE2:Hg19::chr12:89917192..89917200,-#_1147d109bbe9988c7b81794ecc261253p@chr12:89917192..89917200, -
5.42e-195FFCP PHASE1:Hg19::chr3:2141982..2141990,+#_1147d109bbe9988c7b81794ecc261253p16@CNTN4
5.42e-195FFCP PHASE1:Hg19::chr3:106921055..106921063,-#_1147d109bbe9988c7b81794ecc261253p@chr3:106921055..106921063, -
5.42e-195FFCP PHASE1:Hg19::chr1:154942216..154942223,-#_1147d109bbe9988c7b81794ecc261253p@chr1:154942216..154942223, -
5.42e-195FFCP PHASE1:Hg19::chr12:71031310..71031321,-#_1147d109bbe9988c7b81794ecc261253p14@PTPRB
5.42e-195FFCP PHASE2:Hg19::chr1:197890538..197890548,+#_1147d109bbe9988c7b81794ecc261253p@chr1:197890538..197890548, +
5.42e-195FFCP PHASE1:Hg19::chr3:99508248..99508255,-#_1147d109bbe9988c7b81794ecc261253p@chr3:99508248..99508255, -
5.42e-195FFCP PHASE1:Hg19::chr3:157206082..157206087,-#_1147d109bbe9988c7b81794ecc261253p@chr3:157206082..157206087, -
5.42e-195FFCP PHASE1:Hg19::chr12:89917192..89917200,-#_1147d109bbe9988c7b81794ecc261253p@chr12:89917192..89917200, -
5.42e-195FFCP PHASE2:Hg19::chr7:18439468..18439477,+#_1147d109bbe9988c7b81794ecc261253p@chr7:18439468..18439477, +
5.42e-195FFCP PHASE2:Hg19::chr15:96181433..96181441,-#_1147d109bbe9988c7b81794ecc261253p@chr15:96181433..96181441, -
5.42e-195FFCP PHASE2:Hg19::chrX:135338329..135338337,-#_1147d109bbe9988c7b81794ecc261253p@chrX:135338329..135338337, -
5.42e-195FFCP PHASE1:Hg19::chr1:113250450..113250457,-#_1147d109bbe9988c7b81794ecc261253p18@RHOC
5.42e-195FFCP PHASE2:Hg19::chr7:79999046..79999051,+#_1147d109bbe9988c7b81794ecc261253p41@CD36
5.42e-195FFCP PHASE2:Hg19::chr12:79920595..79920605,-#_1147d109bbe9988c7b81794ecc261253p@chr12:79920595..79920605, -
5.42e-195FFCP PHASE1:Hg19::chr3:2141759..2141771,-#_1147d109bbe9988c7b81794ecc261253p@chr3:2141759..2141771, -
5.42e-195FFCP PHASE2:Hg19::chr14:87689429..87689432,-#_1147d109bbe9988c7b81794ecc261253p@chr14:87689429..87689432, -
5.42e-195FFCP PHASE2:Hg19::chr3:163194047..163194081,-#_1147d109bbe9988c7b81794ecc261253p@chr3:163194047..163194081, -
5.42e-195FFCP PHASE1:Hg19::chr3:127441545..127441550,-#_1147d109bbe9988c7b81794ecc261253p58@MGLL
5.42e-195FFCP PHASE1:Hg19::chr14:87689429..87689432,-#_1147d109bbe9988c7b81794ecc261253p@chr14:87689429..87689432, -
5.42e-195FFCP PHASE2:Hg19::chr6:152589291..152589303,-#_1147d109bbe9988c7b81794ecc261253p38@SYNE1
5.42e-195FFCP PHASE2:Hg19::chr5:109694595..109694599,+#_1147d109bbe9988c7b81794ecc261253p@chr5:109694595..109694599, +
5.42e-195FFCP PHASE2:Hg19::chr3:2141785..2141802,-#_1147d109bbe9988c7b81794ecc261253p@chr3:2141785..2141802, -
5.42e-195FFCP PHASE2:Hg19::chr12:70351934..70351939,+#_1147d109bbe9988c7b81794ecc261253p@chr12:70351934..70351939, +
5.42e-195FFCP PHASE1:Hg19::chr1:197889977..197890013,+#_1147d109bbe9988c7b81794ecc261253p@chr1:197889977..197890013, +
5.42e-195FFCP PHASE1:Hg19::chr18:22253588..22253590,+#_1147d109bbe9988c7b81794ecc261253p@chr18:22253588..22253590, +
5.42e-195FFCP PHASE1:Hg19::chr15:96181433..96181441,-#_1147d109bbe9988c7b81794ecc261253p@chr15:96181433..96181441, -
5.42e-195FFCP PHASE1:Hg19::chr6:150735340..150735361,+#_1147d109bbe9988c7b81794ecc261253p@chr6:150735340..150735361, +
5.42e-195FFCP PHASE1:Hg19::chr4:72885984..72885997,-#_1147d109bbe9988c7b81794ecc261253p@chr4:72885984..72885997, -
5.42e-195FFCP PHASE2:Hg19::chr9:18504821..18504825,+#_1147d109bbe9988c7b81794ecc261253p@chr9:18504821..18504825, +
5.42e-195FFCP PHASE1:Hg19::chr12:79920639..79920642,-#_1147d109bbe9988c7b81794ecc261253p@chr12:79920639..79920642, -
5.42e-195FFCP PHASE2:Hg19::chr10:63700017..63700022,+#_1147d109bbe9988c7b81794ecc261253p@chr10:63700017..63700022, +
5.42e-195FFCP PHASE1:Hg19::chr6:109702786..109702795,-#_1147d109bbe9988c7b81794ecc261253p21@CD164
5.42e-195FFCP PHASE1:Hg19::chr10:63700043..63700053,+#_1147d109bbe9988c7b81794ecc261253p@chr10:63700043..63700053, +
5.42e-195FFCP PHASE2:Hg19::chr3:157230599..157230604,+#_1147d109bbe9988c7b81794ecc261253p@chr3:157230599..157230604, +
5.42e-195FFCP PHASE1:Hg19::chr7:18439523..18439524,+#_1147d109bbe9988c7b81794ecc261253p@chr7:18439523..18439524, +
5.42e-195FFCP PHASE2:Hg19::chr10:33244302..33244305,-#_1147d109bbe9988c7b81794ecc261253p@chr10:33244302..33244305, -
5.42e-195FFCP PHASE1:Hg19::chr6:152589345..152589353,-#_1147d109bbe9988c7b81794ecc261253p63@SYNE1
5.42e-195FFCP PHASE2:Hg19::chr12:80818234..80818245,+#_1147d109bbe9988c7b81794ecc261253p@chr12:80818234..80818245, +
5.42e-195FFCP PHASE2:Hg19::chr1:198595872..198595878,+#_1147d109bbe9988c7b81794ecc261253p@chr1:198595872..198595878, +
5.42e-195FFCP PHASE1:Hg19::chr3:157230582..157230593,+#_1147d109bbe9988c7b81794ecc261253p@chr3:157230582..157230593, +
5.42e-195FFCP PHASE1:Hg19::chr1:192407901..192407907,-#_1147d109bbe9988c7b81794ecc261253p@chr1:192407901..192407907, -
5.42e-195FFCP PHASE1:Hg19::chr19:41281630..41281644,+#_1147d109bbe9988c7b81794ecc261253p6@RAB4B
5.42e-195FFCP PHASE1:Hg19::chr10:33244345..33244348,-#_1147d109bbe9988c7b81794ecc261253p@chr10:33244345..33244348, -
5.42e-195FFCP PHASE2:Hg19::chr5:128083931..128083952,+#_1147d109bbe9988c7b81794ecc261253p@chr5:128083931..128083952, +
5.42e-195FFCP PHASE1:Hg19::chr4:169935453..169935460,-#_1147d109bbe9988c7b81794ecc261253p@chr4:169935453..169935460, -
5.42e-195FFCP PHASE1:Hg19::chr3:2140234..2140235,+#_1147d109bbe9988c7b81794ecc261253p36@CNTN4
5.42e-195FFCP PHASE1:Hg19::chr1:228806586..228806591,+#_1147d109bbe9988c7b81794ecc261253p@chr1:228806586..228806591, +
5.42e-195FFCP PHASE1:Hg19::chr3:2141851..2141858,-#_1147d109bbe9988c7b81794ecc261253p@chr3:2141851..2141858, -

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=DOID:4549&oldid=3275712"