DOID:0050427: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=xeroderma pigmentosum | |name=xeroderma pigmentosum | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:47, 12 September 2014
| Name: | xeroderma pigmentosum | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Xrefs: |
| ||
| Comments: | OMIM mapping confirmed by DO. [SN]. |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | DOID:0050737(autosomal recessive disease) |
|---|
Children
| is a: | FF:10563-108A5 (xeroderma pigentosum b cell line:XPL 17),FF:10564-108A6 (),FF:10566-108A8 () |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10563-108A5 (xeroderma pigentosum b cell line:XPL 17)
- 10564-108A6
- 10566-108A8
Mouse (Mus musculus)
- 10563-108A5 (xeroderma pigentosum b cell line:XPL 17)
- 10564-108A6
- 10566-108A8
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:0050427 (xeroderma pigmentosum), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE1:Hg19::chr11:33676379..33676397,+#_3ef41129557f72bbf5b7c6ad70518d0c | p@chr11:33676379..33676397, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr11:33676379..33676397,+#_3ef41129557f72bbf5b7c6ad70518d0c | p@chr11:33676379..33676397, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr1:152880744..152880747,+#_3ef41129557f72bbf5b7c6ad70518d0c | p3@IVL |
| 5.42e-195 | FFCP PHASE1:Hg19::chr1:152880744..152880747,+#_3ef41129557f72bbf5b7c6ad70518d0c | p3@IVL |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:25643157..25643159,+#_3ef41129557f72bbf5b7c6ad70518d0c | p@chr2:25643157..25643159, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:25643157..25643159,+#_3ef41129557f72bbf5b7c6ad70518d0c | p@chr2:25643157..25643159, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr1:101838740..101838743,+#_3ef41129557f72bbf5b7c6ad70518d0c | p@chr1:101838740..101838743, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr1:101838740..101838743,+#_3ef41129557f72bbf5b7c6ad70518d0c | p@chr1:101838740..101838743, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr1:101914223..101914228,-#_3ef41129557f72bbf5b7c6ad70518d0c | p@chr1:101914223..101914228, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr1:101914223..101914228,-#_3ef41129557f72bbf5b7c6ad70518d0c | p@chr1:101914223..101914228, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr22:23055632..23055638,+#_e115f3e0f50be7a67d842b24243b4d1d | p3@DQ234400 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr22:23055632..23055638,+#_e115f3e0f50be7a67d842b24243b4d1d | p3@DQ234400 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr4:5364767..5364769,+#_e115f3e0f50be7a67d842b24243b4d1d | p@chr4:5364767..5364769, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr4:5364767..5364769,+#_e115f3e0f50be7a67d842b24243b4d1d | p@chr4:5364767..5364769, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr18:67613122..67613129,-#_e115f3e0f50be7a67d842b24243b4d1d | p@chr18:67613122..67613129, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr18:67613122..67613129,-#_e115f3e0f50be7a67d842b24243b4d1d | p@chr18:67613122..67613129, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr8:56034458..56034491,+#_b5eecf9e89be0158dc0e1005f0daaaeb | p@chr8:56034458..56034491, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr12:50616792..50616804,-#_b5eecf9e89be0158dc0e1005f0daaaeb | p29@LIMA1 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr8:56034458..56034491,+#_b5eecf9e89be0158dc0e1005f0daaaeb | p@chr8:56034458..56034491, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr20:46041421..46041448,-#_b5eecf9e89be0158dc0e1005f0daaaeb | p3@ENST00000437920 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr6:115036814..115036827,+#_b5eecf9e89be0158dc0e1005f0daaaeb | p@chr6:115036814..115036827, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr20:46041421..46041448,-#_b5eecf9e89be0158dc0e1005f0daaaeb | p3@ENST00000437920 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr6:115036814..115036827,+#_b5eecf9e89be0158dc0e1005f0daaaeb | p@chr6:115036814..115036827, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr11:114997342..114997344,-#_b5eecf9e89be0158dc0e1005f0daaaeb | p@chr11:114997342..114997344, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr13:99573473..99573481,-#_b5eecf9e89be0158dc0e1005f0daaaeb | p@chr13:99573473..99573481, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr11:114997342..114997344,-#_b5eecf9e89be0158dc0e1005f0daaaeb | p@chr11:114997342..114997344, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:889109..889122,-#_b5eecf9e89be0158dc0e1005f0daaaeb | p@chr2:889109..889122, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:889109..889122,-#_b5eecf9e89be0158dc0e1005f0daaaeb | p@chr2:889109..889122, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr13:99573473..99573481,-#_b5eecf9e89be0158dc0e1005f0daaaeb | p@chr13:99573473..99573481, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr12:50616792..50616804,-#_b5eecf9e89be0158dc0e1005f0daaaeb | p29@LIMA1 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr6:166581392..166581398,+#_b5eecf9e89be0158dc0e1005f0daaaeb | p@chr6:166581392..166581398, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr6:166581392..166581398,+#_b5eecf9e89be0158dc0e1005f0daaaeb | p@chr6:166581392..166581398, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr11:2644357..2644369,+#_b5eecf9e89be0158dc0e1005f0daaaeb | p@chr11:2644357..2644369, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr11:2644357..2644369,+#_b5eecf9e89be0158dc0e1005f0daaaeb | p@chr11:2644357..2644369, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr20:56058449..56058484,+#_b5eecf9e89be0158dc0e1005f0daaaeb | p@chr20:56058449..56058484, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr20:56058449..56058484,+#_b5eecf9e89be0158dc0e1005f0daaaeb | p@chr20:56058449..56058484, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr7:70241758..70241770,+#_5f0e66114eae81fc8c768c66251e5958 | p47@AUTS2 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr7:70241758..70241770,+#_5f0e66114eae81fc8c768c66251e5958 | p47@AUTS2 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:207105167..207105184,-#_be3ea9bdd57cdb46c238917f058e7ac2 | p5@PIGR |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:207105167..207105184,-#_be3ea9bdd57cdb46c238917f058e7ac2 | p5@PIGR |
| 2.39e-66 | FFCP PHASE2:Hg19::chr17:76475138..76475154,-#_be3ea9bdd57cdb46c238917f058e7ac2 | p@chr17:76475138..76475154, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr12:131201475..131201485,-#_be3ea9bdd57cdb46c238917f058e7ac2 | p@chr12:131201475..131201485, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr17:76475138..76475154,-#_be3ea9bdd57cdb46c238917f058e7ac2 | p@chr17:76475138..76475154, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:70388198..70388245,-#_be3ea9bdd57cdb46c238917f058e7ac2 | p@chr2:70388198..70388245, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:70388198..70388245,-#_be3ea9bdd57cdb46c238917f058e7ac2 | p@chr2:70388198..70388245, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr12:131201475..131201485,-#_be3ea9bdd57cdb46c238917f058e7ac2 | p@chr12:131201475..131201485, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr13:100016406..100016419,+#_176345c38018b23dfa0636253f7dec7c | p@chr13:100016406..100016419, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr13:100016406..100016419,+#_176345c38018b23dfa0636253f7dec7c | p@chr13:100016406..100016419, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr8:142117194..142117210,+#_176345c38018b23dfa0636253f7dec7c | p@chr8:142117194..142117210, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr8:142117194..142117210,+#_176345c38018b23dfa0636253f7dec7c | p@chr8:142117194..142117210, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr11:109959243..109959256,+#_176345c38018b23dfa0636253f7dec7c | p@chr11:109959243..109959256, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr11:109959243..109959256,+#_176345c38018b23dfa0636253f7dec7c | p@chr11:109959243..109959256, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr22:39843128..39843135,+#_56a76022578976a9e6f0e7cd50778726 | p@chr22:39843128..39843135, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr22:39843128..39843135,+#_56a76022578976a9e6f0e7cd50778726 | p@chr22:39843128..39843135, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr14:75802635..75802649,+#_56a76022578976a9e6f0e7cd50778726 | p@chr14:75802635..75802649, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr14:75802635..75802649,+#_56a76022578976a9e6f0e7cd50778726 | p@chr14:75802635..75802649, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr18:56203145..56203154,+#_56a76022578976a9e6f0e7cd50778726 | p@chr18:56203145..56203154, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr18:56203145..56203154,+#_56a76022578976a9e6f0e7cd50778726 | p@chr18:56203145..56203154, + |
| 2.42e-50 | FFCP PHASE2:Hg19::chr3:178791955..178791978,-#_0659e3e0d26e545e6d8037c46083c880 | p@chr3:178791955..178791978, - |
| 2.42e-50 | FFCP PHASE1:Hg19::chr3:178791955..178791978,-#_0659e3e0d26e545e6d8037c46083c880 | p@chr3:178791955..178791978, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr1:98642709..98642713,-#_0659e3e0d26e545e6d8037c46083c880 | p@chr1:98642709..98642713, - |
| 2.42e-50 | FFCP PHASE1:Hg19::chr1:98642709..98642713,-#_0659e3e0d26e545e6d8037c46083c880 | p@chr1:98642709..98642713, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr9:35650561..35650570,-#_0659e3e0d26e545e6d8037c46083c880 | p3@SIT1 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr9:35650561..35650570,-#_0659e3e0d26e545e6d8037c46083c880 | p3@SIT1 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr6:115036832..115036842,+#_0659e3e0d26e545e6d8037c46083c880 | p@chr6:115036832..115036842, + |
| 2.42e-50 | FFCP PHASE2:Hg19::chr1:207105188..207105210,-#_0659e3e0d26e545e6d8037c46083c880 | p3@PIGR |
| 2.42e-50 | FFCP PHASE1:Hg19::chr6:115036832..115036842,+#_0659e3e0d26e545e6d8037c46083c880 | p@chr6:115036832..115036842, + |
| 2.42e-50 | FFCP PHASE2:Hg19::chrX:11786454..11786465,+#_0659e3e0d26e545e6d8037c46083c880 | p25@MSL3 |
| 2.42e-50 | FFCP PHASE1:Hg19::chrX:11786454..11786465,+#_0659e3e0d26e545e6d8037c46083c880 | p25@MSL3 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr9:79057008..79057019,+#_0659e3e0d26e545e6d8037c46083c880 | p5@GCNT1 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr9:79057008..79057019,+#_0659e3e0d26e545e6d8037c46083c880 | p5@GCNT1 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr1:207105188..207105210,-#_0659e3e0d26e545e6d8037c46083c880 | p3@PIGR |
| 2.42e-50 | FFCP PHASE2:Hg19::chr14:25495787..25495796,-#_0659e3e0d26e545e6d8037c46083c880 | p@chr14:25495787..25495796, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr2:160779191..160779202,-#_0659e3e0d26e545e6d8037c46083c880 | p@chr2:160779191..160779202, - |
| 2.42e-50 | FFCP PHASE1:Hg19::chr2:160779191..160779202,-#_0659e3e0d26e545e6d8037c46083c880 | p@chr2:160779191..160779202, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr8:6594766..6594776,+#_0659e3e0d26e545e6d8037c46083c880 | p@chr8:6594766..6594776, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr8:6594766..6594776,+#_0659e3e0d26e545e6d8037c46083c880 | p@chr8:6594766..6594776, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr14:25495787..25495796,-#_0659e3e0d26e545e6d8037c46083c880 | p@chr14:25495787..25495796, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr8:135577784..135577795,-#_0659e3e0d26e545e6d8037c46083c880 | p15@ZFAT |
| 2.42e-50 | FFCP PHASE1:Hg19::chr8:135577784..135577795,-#_0659e3e0d26e545e6d8037c46083c880 | p15@ZFAT |
| 2.42e-50 | FFCP PHASE2:Hg19::chr15:59665311..59665320,-#_0659e3e0d26e545e6d8037c46083c880 | p6@MYO1E |
| 2.42e-50 | FFCP PHASE1:Hg19::chr15:59665311..59665320,-#_0659e3e0d26e545e6d8037c46083c880 | p6@MYO1E |
| 3.99e-50 | FFCP PHASE1:Hg19::chr11:109958732..109958742,-#_3cff97898d10a97a6bba48847d670e22 | p@chr11:109958732..109958742, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr11:109958732..109958742,-#_3cff97898d10a97a6bba48847d670e22 | p@chr11:109958732..109958742, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr15:90546643..90546659,+#_3cff97898d10a97a6bba48847d670e22 | p@chr15:90546643..90546659, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr15:90546643..90546659,+#_3cff97898d10a97a6bba48847d670e22 | p@chr15:90546643..90546659, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr9:87316933..87316943,+#_3cff97898d10a97a6bba48847d670e22 | p@chr9:87316933..87316943, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr9:87316933..87316943,+#_3cff97898d10a97a6bba48847d670e22 | p@chr9:87316933..87316943, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr17:79213963..79213968,+#_3cff97898d10a97a6bba48847d670e22 | p@chr17:79213963..79213968, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr15:79310342..79310352,-#_3cff97898d10a97a6bba48847d670e22 | p17@RASGRF1 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr15:79310342..79310352,-#_3cff97898d10a97a6bba48847d670e22 | p17@RASGRF1 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr16:9934872..9934888,-#_3cff97898d10a97a6bba48847d670e22 | p@chr16:9934872..9934888, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr17:79213963..79213968,+#_3cff97898d10a97a6bba48847d670e22 | p@chr17:79213963..79213968, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr16:9934872..9934888,-#_3cff97898d10a97a6bba48847d670e22 | p@chr16:9934872..9934888, - |
| 6.58e-50 | FFCP PHASE2:Hg19::chr12:45820291..45820337,-#_bcde5b1086d754777285b9a943f9977f | p@chr12:45820291..45820337, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr2:238661800..238661842,+#_bcde5b1086d754777285b9a943f9977f | p@chr2:238661800..238661842, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chr1:160616775..160616791,+#_bcde5b1086d754777285b9a943f9977f | p@chr1:160616775..160616791, + |
| 6.58e-50 | FFCP PHASE1:Hg19::chr1:160616775..160616791,+#_bcde5b1086d754777285b9a943f9977f | p@chr1:160616775..160616791, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chr7:2208099..2208102,+#_bcde5b1086d754777285b9a943f9977f | p@chr7:2208099..2208102, + |
| 6.58e-50 | FFCP PHASE1:Hg19::chr7:2208099..2208102,+#_bcde5b1086d754777285b9a943f9977f | p@chr7:2208099..2208102, + |
