CL:0002159: Difference between revisions
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|located_in= | |located_in= | ||
|name=general ecto-epithelial cell | |name=general ecto-epithelial cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date=2010-08-26T08:31:08Z | |obo_creation_date=2010-08-26T08:31:08Z | ||
|part_of= | |part_of= | ||
Latest revision as of 16:40, 12 September 2014
| Name: | general ecto-epithelial cell | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Epithelial cells derived from general body ectoderm and ectoderm placodes." [GOC:tfm] | ||
| Xrefs: |
| ||
| Created by: | tmeehan | ||
| Creation date: | 2010-08-26T08:31:08Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0002077(ecto-epithelial cell) |
|---|
Children
| is a: | CL:0000362 (epidermal cell),CL:0000575 (corneal epithelial cell),CL:0002166 (epithelial cell of Malassez),CL:0002308 (epithelial cell of skin gland) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10843-111E6 (merkel cell carcinoma cell line:MKL-1)
- 10844-111E7 (merkel cell carcinoma cell line:MS-1)
- 11220-116B5 (Sebocyte, donor1)
- 11272-116H3 (Keratinocyte - epidermal, donor1)
- 11301-117B5 (Sebocyte, donor2)
- 11349-117G8 (Keratinocyte - epidermal, donor2)
- 11378-118B1 (Sebocyte, donor3)
- 11421-118F8 (Keratinocyte - epidermal, donor3)
- 11503-119F9
- 11504-119G1 (Hair Follicle Outer Root Sheath Cells, donor1)
... further results Mouse (Mus musculus)
- 10843-111E6 (merkel cell carcinoma cell line:MKL-1)
- 10844-111E7 (merkel cell carcinoma cell line:MS-1)
- 11220-116B5 (Sebocyte, donor1)
- 11272-116H3 (Keratinocyte - epidermal, donor1)
- 11301-117B5 (Sebocyte, donor2)
- 11349-117G8 (Keratinocyte - epidermal, donor2)
- 11378-118B1 (Sebocyte, donor3)
- 11421-118F8 (Keratinocyte - epidermal, donor3)
- 11503-119F9
- 11504-119G1 (Hair Follicle Outer Root Sheath Cells, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002159 (general ecto-epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.93e-64 | FFCP PHASE1:Hg19::chr11:93754316..93754353,+#_f8e80fa55bd0bf6d73a219a410cd9fd4 | p2@HEPHL1 |
| 7.93e-64 | FFCP PHASE2:Hg19::chr11:93754316..93754353,+#_f8e80fa55bd0bf6d73a219a410cd9fd4 | p2@HEPHL1 |
| 1.65e-63 | FFCP PHASE1:Hg19::chr6:35048829..35048844,+#_c4c6817891e860d35eb36ca82f542964 | p@chr6:35048829..35048844, + |
| 1.65e-63 | FFCP PHASE2:Hg19::chr6:35048829..35048844,+#_c4c6817891e860d35eb36ca82f542964 | p@chr6:35048829..35048844, + |
| 1.17e-62 | FFCP PHASE2:Hg19::chr18:37539064..37539087,+#_8cfd08919b54bdf485e378743600a24d | p@chr18:37539064..37539087, + |
| 1.17e-62 | FFCP PHASE1:Hg19::chr18:37539064..37539087,+#_8cfd08919b54bdf485e378743600a24d | p@chr18:37539064..37539087, + |
| 2.82e-62 | FFCP PHASE1:Hg19::chr13:30259768..30259777,+#_b9a1c3376e7372254d7d998ccf86ae0a | p@chr13:30259768..30259777, + |
| 2.82e-62 | FFCP PHASE2:Hg19::chr13:30259768..30259777,+#_b9a1c3376e7372254d7d998ccf86ae0a | p@chr13:30259768..30259777, + |
| 1.39e-59 | FFCP PHASE1:Hg19::chr12:56333189..56333202,+#_2a749c22dba2487fdafc076efb19c4d4 | p12@DGKA |
| 1.39e-59 | FFCP PHASE2:Hg19::chr12:56333189..56333202,+#_2a749c22dba2487fdafc076efb19c4d4 | p12@DGKA |
| 1.85e-56 | FFCP PHASE2:Hg19::chr18:9538358..9538360,+#_d1de0d891842f8f3cc4900ad9ef9a1ea | p@chr18:9538358..9538360, + |
| 1.85e-56 | FFCP PHASE1:Hg19::chr18:9538358..9538360,+#_d1de0d891842f8f3cc4900ad9ef9a1ea | p@chr18:9538358..9538360, + |
| 2.99e-56 | FFCP PHASE1:Hg19::chr5:167247199..167247212,+#_f0c27755063fc81ac6cb7e495524935b | p@chr5:167247199..167247212, + |
| 2.99e-56 | FFCP PHASE2:Hg19::chr5:167247199..167247212,+#_f0c27755063fc81ac6cb7e495524935b | p@chr5:167247199..167247212, + |
| 3.29e-56 | FFCP PHASE2:Hg19::chr12:46897588..46897603,+#_9c65fb1f4c8f29798ba15623ad973481 | p@chr12:46897588..46897603, + |
| 3.29e-56 | FFCP PHASE1:Hg19::chr12:46897588..46897603,+#_9c65fb1f4c8f29798ba15623ad973481 | p@chr12:46897588..46897603, + |
| 7.06e-56 | FFCP PHASE2:Hg19::chr8:141728760..141728771,-#_ec71f0961e5e8915afe89fd931c6f24e | p36@PTK2 |
| 7.06e-56 | FFCP PHASE1:Hg19::chr8:141728760..141728771,-#_ec71f0961e5e8915afe89fd931c6f24e | p36@PTK2 |
| 1.05e-55 | FFCP PHASE2:Hg19::chr17:48611940..48611947,+#_4490b4580a3490973dc1a1a71d3009f5 | p5@EPN3 |
| 1.05e-55 | FFCP PHASE1:Hg19::chr17:48611940..48611947,+#_4490b4580a3490973dc1a1a71d3009f5 | p5@EPN3 |
| 3.19e-54 | FFCP PHASE1:Hg19::chr13:30259714..30259730,+#_e2b96e628ee4e6e7f0482b74d547d727 | p@chr13:30259714..30259730, + |
| 3.19e-54 | FFCP PHASE2:Hg19::chr13:30259714..30259730,+#_e2b96e628ee4e6e7f0482b74d547d727 | p@chr13:30259714..30259730, + |
| 1.03e-53 | FFCP PHASE2:Hg19::chr7:40855279..40855286,+#_6e647e7ead0dfaf8c9564e391dcbb4d6 | p@chr7:40855279..40855286, + |
| 1.03e-53 | FFCP PHASE1:Hg19::chr7:40855279..40855286,+#_6e647e7ead0dfaf8c9564e391dcbb4d6 | p@chr7:40855279..40855286, + |
| 1.24e-52 | FFCP PHASE1:Hg19::chr17:39742822..39742850,+#_892e8db02a5e3d07330ba0ed9c2c0c0b | p@chr17:39742822..39742850, + |
| 1.24e-52 | FFCP PHASE2:Hg19::chr17:39742822..39742850,+#_892e8db02a5e3d07330ba0ed9c2c0c0b | p@chr17:39742822..39742850, + |
| 1.44e-51 | FFCP PHASE2:Hg19::chr11:121421125..121421135,+#_e423d035ea3d933c10f1973004e7a4ed | p@chr11:121421125..121421135, + |
| 1.44e-51 | FFCP PHASE1:Hg19::chr11:121421125..121421135,+#_e423d035ea3d933c10f1973004e7a4ed | p@chr11:121421125..121421135, + |
| 1.52e-50 | FFCP PHASE2:Hg19::chr10:118187325..118187332,+#_e2cb096c08a9701188ace07f859ffcbf | p5@PNLIPRP3 |
| 1.52e-50 | FFCP PHASE1:Hg19::chr10:118187325..118187332,+#_e2cb096c08a9701188ace07f859ffcbf | p5@PNLIPRP3 |
| 1.69e-50 | FFCP PHASE1:Hg19::chr9:27524485..27524505,+#_cb4aa1c3bab1fa71c6179b44b2536567 | p2@IFNK |
| 1.69e-50 | FFCP PHASE2:Hg19::chr9:27524485..27524505,+#_cb4aa1c3bab1fa71c6179b44b2536567 | p2@IFNK |
| 3.74e-49 | FFCP PHASE2:Hg19::chr6:29643393..29643442,-#_e580c877ea60fc83766c79de95307acc | p@chr6:29643393..29643442, - |
| 3.74e-49 | FFCP PHASE1:Hg19::chr6:29643393..29643442,-#_e580c877ea60fc83766c79de95307acc | p@chr6:29643393..29643442, - |
| 4.28e-46 | FFCP PHASE1:Hg19::chr5:167247103..167247112,+#_092f6713b078ac98a9048dc632eeef5c | p@chr5:167247103..167247112, + |
| 4.28e-46 | FFCP PHASE2:Hg19::chr5:167247103..167247112,+#_092f6713b078ac98a9048dc632eeef5c | p@chr5:167247103..167247112, + |
| 1.39e-45 | FFCP PHASE2:Hg19::chr7:40883521..40883532,+#_28c835b86aedaeb023c9318c86a74cd8 | p@chr7:40883521..40883532, + |
| 1.39e-45 | FFCP PHASE1:Hg19::chr7:40883521..40883532,+#_28c835b86aedaeb023c9318c86a74cd8 | p@chr7:40883521..40883532, + |
| 4.33e-45 | FFCP PHASE2:Hg19::chr12:52908762..52908781,+#_d5b3ad7c0b7580fa3e17f1c60b3a3204 | p10@CU687195 |
| 4.33e-45 | FFCP PHASE1:Hg19::chr12:52908762..52908781,+#_d5b3ad7c0b7580fa3e17f1c60b3a3204 | p10@CU687195 |
| 2.34e-44 | FFCP PHASE1:Hg19::chr10:106205489..106205498,+#_a359ff813bd44c875908b7e931d4776c | p@chr10:106205489..106205498, + |
| 2.34e-44 | FFCP PHASE2:Hg19::chr10:106205489..106205498,+#_a359ff813bd44c875908b7e931d4776c | p@chr10:106205489..106205498, + |
| 2.96e-43 | FFCP PHASE2:Hg19::chr12:52867616..52867640,-#_d90f37499dee20fc8381ef4a1cf9a53f | p2@KRT6C |
| 2.96e-43 | FFCP PHASE1:Hg19::chr12:52867616..52867640,-#_d90f37499dee20fc8381ef4a1cf9a53f | p2@KRT6C |
| 4.85e-43 | FFCP PHASE2:Hg19::chr16:57954541..57954548,-#_89fe19cb64ce120c8113342fd0f02f0e | p@chr16:57954541..57954548, - |
| 4.85e-43 | FFCP PHASE2:Hg19::chr22:23586671..23586679,+#_89fe19cb64ce120c8113342fd0f02f0e | p@chr22:23586671..23586679, + |
| 4.85e-43 | FFCP PHASE1:Hg19::chr16:57954541..57954548,-#_89fe19cb64ce120c8113342fd0f02f0e | p@chr16:57954541..57954548, - |
| 4.85e-43 | FFCP PHASE1:Hg19::chr22:23586671..23586679,+#_89fe19cb64ce120c8113342fd0f02f0e | p@chr22:23586671..23586679, + |
| 1.5e-42 | FFCP PHASE1:Hg19::chr6:43154685..43154696,+#_939c3b1b20eddbd3d3e7baab3f24326b | p3@CUL9 |
| 1.5e-42 | FFCP PHASE2:Hg19::chr6:43154685..43154696,+#_939c3b1b20eddbd3d3e7baab3f24326b | p3@CUL9 |
| 2.77e-42 | FFCP PHASE2:Hg19::chr12:58159508..58159526,+#_9d72f4f0dd99f3b5b9207d1067bc5ec5 | p@chr12:58159508..58159526, + |
| 2.77e-42 | FFCP PHASE1:Hg19::chr12:58159508..58159526,+#_9d72f4f0dd99f3b5b9207d1067bc5ec5 | p@chr12:58159508..58159526, + |
| 3.69e-42 | FFCP PHASE2:Hg19::chr17:73750858..73750868,+#_b1a1a1481c554f50ae2229b67232fe15 | p@chr17:73750858..73750868, + |
| 3.69e-42 | FFCP PHASE1:Hg19::chr17:73750858..73750868,+#_b1a1a1481c554f50ae2229b67232fe15 | p@chr17:73750858..73750868, + |
| 6.34e-41 | FFCP PHASE2:Hg19::chr1:2359111..2359148,+#_5013e0ee482d82069e6fddc70b2ae993 | p@chr1:2359111..2359148, + |
| 6.34e-41 | FFCP PHASE1:Hg19::chr1:2359111..2359148,+#_5013e0ee482d82069e6fddc70b2ae993 | p@chr1:2359111..2359148, + |
| 7.12e-40 | FFCP PHASE1:Hg19::chr8:49783129..49783154,+#_80e90322f168eb007fb75ba3e0217e65 | p@chr8:49783129..49783154, + |
| 7.12e-40 | FFCP PHASE2:Hg19::chr8:49783129..49783154,+#_80e90322f168eb007fb75ba3e0217e65 | p@chr8:49783129..49783154, + |
| 2.25e-39 | FFCP PHASE2:Hg19::chr17:38120375..38120394,+#_52338b835fabdaf6eb960f9a7cfbfe46 | p@chr17:38120375..38120394, + |
| 2.25e-39 | FFCP PHASE1:Hg19::chr17:38120375..38120394,+#_52338b835fabdaf6eb960f9a7cfbfe46 | p@chr17:38120375..38120394, + |
| 2.9e-39 | FFCP PHASE1:Hg19::chr10:106205466..106205487,+#_10c5b4fc272b97553b60e6d261db30af | p@chr10:106205466..106205487, + |
| 2.9e-39 | FFCP PHASE2:Hg19::chr10:106205466..106205487,+#_10c5b4fc272b97553b60e6d261db30af | p@chr10:106205466..106205487, + |
| 8.64e-39 | FFCP PHASE2:Hg19::chr11:16119201..16119231,-#_199c7630522de9d67af6a67a851f57c1 | p@chr11:16119201..16119231, - |
| 8.64e-39 | FFCP PHASE1:Hg19::chr11:16119201..16119231,-#_199c7630522de9d67af6a67a851f57c1 | p@chr11:16119201..16119231, - |
| 2.17e-38 | FFCP PHASE2:Hg19::chr1:2359091..2359102,+#_9c5cfbb37b60e207ad110fa8fb6eef77 | p@chr1:2359091..2359102, + |
| 2.17e-38 | FFCP PHASE1:Hg19::chr1:2359091..2359102,+#_9c5cfbb37b60e207ad110fa8fb6eef77 | p@chr1:2359091..2359102, + |
| 3.38e-38 | FFCP PHASE2:Hg19::chr1:16090914..16090925,+#_e66525616f1a4c39ff11ad72aed13c20 | p22@FBLIM1 |
| 3.38e-38 | FFCP PHASE1:Hg19::chr1:16090914..16090925,+#_e66525616f1a4c39ff11ad72aed13c20 | p22@FBLIM1 |
| 3.72e-38 | FFCP PHASE2:Hg19::chr4:184651265..184651270,+#_10da36fd659dfd4838bdd0fdd51658ae | p@chr4:184651265..184651270, + |
| 3.72e-38 | FFCP PHASE1:Hg19::chr4:184651265..184651270,+#_10da36fd659dfd4838bdd0fdd51658ae | p@chr4:184651265..184651270, + |
| 4.5e-38 | FFCP PHASE2:Hg19::chr11:102140952..102140956,+#_187d493bd650ffdbffeb6d7129143a3d | p@chr11:102140952..102140956, + |
| 4.5e-38 | FFCP PHASE1:Hg19::chr11:102140952..102140956,+#_187d493bd650ffdbffeb6d7129143a3d | p@chr11:102140952..102140956, + |
| 4.73e-38 | FFCP PHASE1:Hg19::chr1:44381095..44381120,+#_3c26b21360a71abfa9e333051c46a260 | p@chr1:44381095..44381120, + |
| 4.73e-38 | FFCP PHASE2:Hg19::chr1:44381095..44381120,+#_3c26b21360a71abfa9e333051c46a260 | p@chr1:44381095..44381120, + |
| 5.34e-38 | FFCP PHASE2:Hg19::chr12:28124953..28124957,-#_34d2f099a5ff639d8f908370389b74f3 | p6@PTHLH |
| 5.34e-38 | FFCP PHASE1:Hg19::chr12:28124953..28124957,-#_34d2f099a5ff639d8f908370389b74f3 | p6@PTHLH |
| 6.1e-38 | FFCP PHASE2:Hg19::chr7:40883552..40883571,+#_682b046466cf64350d1d0b62c9b820e8 | p@chr7:40883552..40883571, + |
| 6.1e-38 | FFCP PHASE1:Hg19::chr7:40883552..40883571,+#_682b046466cf64350d1d0b62c9b820e8 | p@chr7:40883552..40883571, + |
| 6.6e-38 | FFCP PHASE1:Hg19::chr6:43154656..43154671,+#_3434f08e417fcaa4e8940530f40c8202 | p5@CUL9 |
| 6.6e-38 | FFCP PHASE2:Hg19::chr6:43154656..43154671,+#_3434f08e417fcaa4e8940530f40c8202 | p5@CUL9 |
| 6.97e-38 | FFCP PHASE2:Hg19::chr12:52844247..52844256,-#_b5d9d4968cf0ffbcb49f621aa28a7eb0 | p@chr12:52844247..52844256, - |
| 6.97e-38 | FFCP PHASE1:Hg19::chr12:52844247..52844256,-#_b5d9d4968cf0ffbcb49f621aa28a7eb0 | p@chr12:52844247..52844256, - |
| 7.36e-38 | FFCP PHASE2:Hg19::chr2:69027041..69027079,+#_03e32ae8b1ac04fb4290790f4a170c98 | p@chr2:69027041..69027079, + |
| 7.36e-38 | FFCP PHASE1:Hg19::chr2:69027041..69027079,+#_03e32ae8b1ac04fb4290790f4a170c98 | p@chr2:69027041..69027079, + |
| 8.23e-38 | FFCP PHASE2:Hg19::chr17:39740629..39740632,-#_5962b359351bcce2c04699c948cd5566 | p9@KRT14 |
| 8.23e-38 | FFCP PHASE1:Hg19::chr17:39740629..39740632,-#_5962b359351bcce2c04699c948cd5566 | p9@KRT14 |
| 1.93e-37 | FFCP PHASE2:Hg19::chr5:65542106..65542109,+#_dc2685761e79db98f195b3d1486737a0 | p@chr5:65542106..65542109, + |
| 1.93e-37 | FFCP PHASE1:Hg19::chr5:65542106..65542109,+#_dc2685761e79db98f195b3d1486737a0 | p@chr5:65542106..65542109, + |
| 2.75e-37 | FFCP PHASE1:Hg19::chr5:167246696..167246714,+#_5efe96d1dc3ce93bc43000904785c24a | p@chr5:167246696..167246714, + |
| 2.75e-37 | FFCP PHASE2:Hg19::chr5:167246696..167246714,+#_5efe96d1dc3ce93bc43000904785c24a | p@chr5:167246696..167246714, + |
| 2.87e-37 | FFCP PHASE2:Hg19::chr1:183177076..183177103,+#_b03d4bb62fe1b2f0e177ff94b2611ae9 | p@chr1:183177076..183177103, + |
| 2.87e-37 | FFCP PHASE1:Hg19::chr1:183177076..183177103,+#_b03d4bb62fe1b2f0e177ff94b2611ae9 | p@chr1:183177076..183177103, + |
| 3.96e-37 | FFCP PHASE2:Hg19::chr12:122430074..122430090,+#_9d2bf33d3e9234715168f358715cedd3 | p@chr12:122430074..122430090, + |
| 3.96e-37 | FFCP PHASE1:Hg19::chr12:122430074..122430090,+#_9d2bf33d3e9234715168f358715cedd3 | p@chr12:122430074..122430090, + |
| 1.99e-36 | FFCP PHASE1:Hg19::chr1:77461159..77461182,+#_2643852adff1ae9167fb94e82a27c5b8 | p3@ST6GALNAC5 |
| 1.99e-36 | FFCP PHASE2:Hg19::chr1:77461159..77461182,+#_2643852adff1ae9167fb94e82a27c5b8 | p3@ST6GALNAC5 |
| 2.09e-36 | FFCP PHASE1:Hg19::chr6:43154700..43154713,+#_e7fea0a9b8a4fddbb47486b80cc2a033 | p2@CUL9 |
| 2.09e-36 | FFCP PHASE2:Hg19::chr6:43154700..43154713,+#_e7fea0a9b8a4fddbb47486b80cc2a033 | p2@CUL9 |
| 3.28e-36 | FFCP PHASE1:Hg19::chr21:44957855..44957891,-#_e43cc22709b354da1888df418dcff7ba | p@chr21:44957855..44957891, - |
| 3.28e-36 | FFCP PHASE2:Hg19::chr21:44957855..44957891,-#_e43cc22709b354da1888df418dcff7ba | p@chr21:44957855..44957891, - |
