Personal tools

CL:0000855: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 13: Line 13:
|located_in=
|located_in=
|name=sensory hair cell
|name=sensory hair cell
|namespace=cell
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=
|part_of=

Latest revision as of 16:38, 12 September 2014

Name:sensory hair cell
Namespace:FANTOM
Definition:"Hair cell is a mechanoreceptor cell that is sensitive to movement of the hair-like projections (stereocilia and kinocilia) which relay the information centrally in the nervous system." [SANBI:mhl]
Xrefs:
links:
BTO:0004744
Synonyms: "hair cell" BROAD []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000199(mechanoreceptor cell)



Children


is a:CL:0002374 (ear hair cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)

Mouse (Mus musculus)

  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000855 (sensory hair cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE1:Mm9::chr9:87599703..87599714,-#_69a436025048d8cd4ef3889620a3674dp@chr9:87599703..87599714, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185378..34185383,+#_69a436025048d8cd4ef3889620a3674dp11@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr13:31171742..31171745,-#_69a436025048d8cd4ef3889620a3674dp@chr13:31171742..31171745, -
3.07e-86FFCP PHASE2:Mm9::chr17:34185343..34185356,+#_69a436025048d8cd4ef3889620a3674dp7@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr10:18246142..18246145,+#_69a436025048d8cd4ef3889620a3674dp@chr10:18246142..18246145, +
3.07e-86FFCP PHASE2:Mm9::chr15:91379135..91379143,-#_69a436025048d8cd4ef3889620a3674dp@chr15:91379135..91379143, -
3.07e-86FFCP PHASE2:Mm9::chr19:10535924..10535927,-#_69a436025048d8cd4ef3889620a3674dp@chr19:10535924..10535927, -
3.07e-86FFCP PHASE1:Mm9::chr11:114652018..114652020,+#_69a436025048d8cd4ef3889620a3674dp@chr11:114652018..114652020, +
3.07e-86FFCP PHASE1:Mm9::chr2:142906965..142906982,-#_69a436025048d8cd4ef3889620a3674dp@chr2:142906965..142906982, -
3.07e-86FFCP PHASE1:Mm9::chr2:53464193..53464197,+#_69a436025048d8cd4ef3889620a3674dp@chr2:53464193..53464197, +
3.07e-86FFCP PHASE2:Mm9::chr2:53464193..53464197,+#_69a436025048d8cd4ef3889620a3674dp@chr2:53464193..53464197, +
3.07e-86FFCP PHASE1:Mm9::chr6:36966993..36966996,-#_69a436025048d8cd4ef3889620a3674dp@chr6:36966993..36966996, -
3.07e-86FFCP PHASE2:Mm9::chr18:66033513..66033517,-#_69a436025048d8cd4ef3889620a3674dp@chr18:66033513..66033517, -
3.07e-86FFCP PHASE2:Mm9::chr4:106770202..106770208,+#_69a436025048d8cd4ef3889620a3674dp@chr4:106770202..106770208, +
3.07e-86FFCP PHASE2:Mm9::chr6:64684637..64684654,+#_69a436025048d8cd4ef3889620a3674dp@chr6:64684637..64684654, +
3.07e-86FFCP PHASE1:Mm9::chr6:64684637..64684654,+#_69a436025048d8cd4ef3889620a3674dp@chr6:64684637..64684654, +
3.07e-86FFCP PHASE2:Mm9::chr2:12032746..12032751,-#_69a436025048d8cd4ef3889620a3674dp@chr2:12032746..12032751, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185389..34185401,+#_69a436025048d8cd4ef3889620a3674dp8@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr18:66033513..66033517,-#_69a436025048d8cd4ef3889620a3674dp@chr18:66033513..66033517, -
3.07e-86FFCP PHASE2:Mm9::chr17:34185362..34185370,+#_69a436025048d8cd4ef3889620a3674dp10@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr2:142907424..142907448,-#_69a436025048d8cd4ef3889620a3674dp@chr2:142907424..142907448, -
3.07e-86FFCP PHASE1:Mm9::chr15:91379135..91379143,-#_69a436025048d8cd4ef3889620a3674dp@chr15:91379135..91379143, -
3.07e-86FFCP PHASE2:Mm9::chr16:55283394..55283400,-#_69a436025048d8cd4ef3889620a3674dp1@Zpld1
3.07e-86FFCP PHASE2:Mm9::chr13:31171742..31171745,-#_69a436025048d8cd4ef3889620a3674dp@chr13:31171742..31171745, -
3.07e-86FFCP PHASE2:Mm9::chr15:97828021..97828028,-#_69a436025048d8cd4ef3889620a3674dp@chr15:97828021..97828028, -
3.07e-86FFCP PHASE2:Mm9::chr6:64684692..64684697,+#_69a436025048d8cd4ef3889620a3674dp@chr6:64684692..64684697, +
3.07e-86FFCP PHASE1:Mm9::chr6:64684692..64684697,+#_69a436025048d8cd4ef3889620a3674dp@chr6:64684692..64684697, +
3.07e-86FFCP PHASE2:Mm9::chr2:180335744..180335746,+#_69a436025048d8cd4ef3889620a3674dp@chr2:180335744..180335746, +
3.07e-86FFCP PHASE1:Mm9::chr16:55283394..55283400,-#_69a436025048d8cd4ef3889620a3674dp1@Zpld1
3.07e-86FFCP PHASE2:Mm9::chr10:18246142..18246145,+#_69a436025048d8cd4ef3889620a3674dp@chr10:18246142..18246145, +
3.07e-86FFCP PHASE2:Mm9::chr17:34185378..34185383,+#_69a436025048d8cd4ef3889620a3674dp11@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr5:72652671..72652676,+#_69a436025048d8cd4ef3889620a3674dp@chr5:72652671..72652676, +
3.07e-86FFCP PHASE1:Mm9::chr4:106770202..106770208,+#_69a436025048d8cd4ef3889620a3674dp@chr4:106770202..106770208, +
3.07e-86FFCP PHASE1:Mm9::chr19:10535924..10535927,-#_69a436025048d8cd4ef3889620a3674dp@chr19:10535924..10535927, -
3.07e-86FFCP PHASE1:Mm9::chr11:94371110..94371111,-#_69a436025048d8cd4ef3889620a3674dp@chr11:94371110..94371111, -
3.07e-86FFCP PHASE2:Mm9::chr2:142906965..142906982,-#_69a436025048d8cd4ef3889620a3674dp@chr2:142906965..142906982, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185343..34185356,+#_69a436025048d8cd4ef3889620a3674dp7@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr6:83129695..83129696,+#_69a436025048d8cd4ef3889620a3674dp24@Dctn1
3.07e-86FFCP PHASE1:Mm9::chr9:92087990..92087995,+#_69a436025048d8cd4ef3889620a3674dp3@Plscr5
3.07e-86FFCP PHASE2:Mm9::chr6:36966723..36966734,-#_69a436025048d8cd4ef3889620a3674dp@chr6:36966723..36966734, -
3.07e-86FFCP PHASE2:Mm9::chr9:92087990..92087995,+#_69a436025048d8cd4ef3889620a3674dp3@Plscr5
3.07e-86FFCP PHASE2:Mm9::chr17:34185389..34185401,+#_69a436025048d8cd4ef3889620a3674dp8@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr15:97828021..97828028,-#_69a436025048d8cd4ef3889620a3674dp@chr15:97828021..97828028, -
3.07e-86FFCP PHASE1:Mm9::chr8:94283075..94283082,+#_69a436025048d8cd4ef3889620a3674dp@chr8:94283075..94283082, +
3.07e-86FFCP PHASE2:Mm9::chr11:94371110..94371111,-#_69a436025048d8cd4ef3889620a3674dp@chr11:94371110..94371111, -
3.07e-86FFCP PHASE2:Mm9::chr3:127520184..127520191,-#_69a436025048d8cd4ef3889620a3674dp@chr3:127520184..127520191, -
3.07e-86FFCP PHASE1:Mm9::chr2:12032746..12032751,-#_69a436025048d8cd4ef3889620a3674dp@chr2:12032746..12032751, -
3.07e-86FFCP PHASE2:Mm9::chr6:83129695..83129696,+#_69a436025048d8cd4ef3889620a3674dp24@Dctn1
3.07e-86FFCP PHASE2:Mm9::chr17:15466888..15466898,-#_69a436025048d8cd4ef3889620a3674dp@chr17:15466888..15466898, -
3.07e-86FFCP PHASE2:Mm9::chr2:142907424..142907448,-#_69a436025048d8cd4ef3889620a3674dp@chr2:142907424..142907448, -
3.07e-86FFCP PHASE1:Mm9::chr6:64684505..64684512,+#_69a436025048d8cd4ef3889620a3674dp@chr6:64684505..64684512, +
3.07e-86FFCP PHASE1:Mm9::chr17:34185362..34185370,+#_69a436025048d8cd4ef3889620a3674dp10@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr11:114652018..114652020,+#_69a436025048d8cd4ef3889620a3674dp@chr11:114652018..114652020, +
3.07e-86FFCP PHASE1:Mm9::chr2:180335744..180335746,+#_69a436025048d8cd4ef3889620a3674dp@chr2:180335744..180335746, +
3.07e-86FFCP PHASE1:Mm9::chr17:15466888..15466898,-#_69a436025048d8cd4ef3889620a3674dp@chr17:15466888..15466898, -
3.07e-86FFCP PHASE1:Mm9::chr5:72652671..72652676,+#_69a436025048d8cd4ef3889620a3674dp@chr5:72652671..72652676, +
3.07e-86FFCP PHASE2:Mm9::chr6:36966993..36966996,-#_69a436025048d8cd4ef3889620a3674dp@chr6:36966993..36966996, -
3.07e-86FFCP PHASE1:Mm9::chr3:127520184..127520191,-#_69a436025048d8cd4ef3889620a3674dp@chr3:127520184..127520191, -
3.07e-86FFCP PHASE1:Mm9::chr6:36966723..36966734,-#_69a436025048d8cd4ef3889620a3674dp@chr6:36966723..36966734, -
3.07e-86FFCP PHASE2:Mm9::chr9:87599703..87599714,-#_69a436025048d8cd4ef3889620a3674dp@chr9:87599703..87599714, -
3.07e-86FFCP PHASE2:Mm9::chr6:64684505..64684512,+#_69a436025048d8cd4ef3889620a3674dp@chr6:64684505..64684512, +
3.07e-86FFCP PHASE2:Mm9::chr8:94283075..94283082,+#_69a436025048d8cd4ef3889620a3674dp@chr8:94283075..94283082, +
2.74e-44FFCP PHASE2:Mm9::chr18:59222033..59222043,+#_3c70b699083a5138fd6e482cca9fa0abp7@A730017C20Rik
2.74e-44FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_3c70b699083a5138fd6e482cca9fa0abp@chr6:113251606..113251613, +
2.74e-44FFCP PHASE2:Mm9::chr7:141605556..141605563,-#_3c70b699083a5138fd6e482cca9fa0abp@chr7:141605556..141605563, -
2.74e-44FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_3c70b699083a5138fd6e482cca9fa0abp3@Fanca
2.74e-44FFCP PHASE1:Mm9::chr5:3909310..3909321,+#_3c70b699083a5138fd6e482cca9fa0abp@chr5:3909310..3909321, +
2.74e-44FFCP PHASE1:Mm9::chr17:66272852..66272855,-#_3c70b699083a5138fd6e482cca9fa0abp@chr17:66272852..66272855, -
2.74e-44FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_3c70b699083a5138fd6e482cca9fa0abp@chr13:37195838..37195870, -
2.74e-44FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_3c70b699083a5138fd6e482cca9fa0abp10@Sec11a
2.74e-44FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_3c70b699083a5138fd6e482cca9fa0abp41@Cacnb2
2.74e-44FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_3c70b699083a5138fd6e482cca9fa0abp1@Tmprss7
2.74e-44FFCP PHASE2:Mm9::chr15:65641741..65641748,+#_3c70b699083a5138fd6e482cca9fa0abp@chr15:65641741..65641748, +
2.74e-44FFCP PHASE1:Mm9::chr19:10536797..10536802,-#_3c70b699083a5138fd6e482cca9fa0abp@chr19:10536797..10536802, -
2.74e-44FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_3c70b699083a5138fd6e482cca9fa0abp@chr17:13983102..13983126, +
2.74e-44FFCP PHASE1:Mm9::chr12:109905399..109905416,+#_3c70b699083a5138fd6e482cca9fa0abp@chr12:109905399..109905416, +
2.74e-44FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_3c70b699083a5138fd6e482cca9fa0abp2@Slc26a5
2.74e-44FFCP PHASE1:Mm9::chr1:63733478..63733491,-#_3c70b699083a5138fd6e482cca9fa0abp1@Dytn
2.74e-44FFCP PHASE1:Mm9::chr10:80806047..80806059,-#_3c70b699083a5138fd6e482cca9fa0abp4@Gipc3
2.74e-44FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_3c70b699083a5138fd6e482cca9fa0abp2@Plscr5
2.74e-44FFCP PHASE1:Mm9::chr9:56208792..56208814,-#_3c70b699083a5138fd6e482cca9fa0abp@chr9:56208792..56208814, -
2.74e-44FFCP PHASE1:Mm9::chr2:29935952..29935993,+#_3c70b699083a5138fd6e482cca9fa0abp7@Pkn3
2.74e-44FFCP PHASE2:Mm9::chr1:93218682..93218691,+#_3c70b699083a5138fd6e482cca9fa0abp2@Espnl
2.74e-44FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_3c70b699083a5138fd6e482cca9fa0abp@chr5:150945209..150945220, +
2.74e-44FFCP PHASE2:Mm9::chr4:151505798..151505818,-#_3c70b699083a5138fd6e482cca9fa0abp21@Espn
2.74e-44FFCP PHASE2:Mm9::chr8:79834836..79834846,-#_3c70b699083a5138fd6e482cca9fa0abp@chr8:79834836..79834846, -
2.74e-44FFCP PHASE1:Mm9::chr3:100724698..100724706,+#_3c70b699083a5138fd6e482cca9fa0abp@chr3:100724698..100724706, +
2.74e-44FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_3c70b699083a5138fd6e482cca9fa0abp1@Grxcr1
2.74e-44FFCP PHASE1:Mm9::chr6:86746562..86746579,-#_3c70b699083a5138fd6e482cca9fa0abp@chr6:86746562..86746579, -
2.74e-44FFCP PHASE2:Mm9::chr13:58283583..58283607,-#_3c70b699083a5138fd6e482cca9fa0abp@chr13:58283583..58283607, -
2.74e-44FFCP PHASE2:Mm9::chr4:130461150..130461185,+#_3c70b699083a5138fd6e482cca9fa0abp@chr4:130461150..130461185, +
2.74e-44FFCP PHASE1:Mm9::chr8:13435173..13435186,+#_3c70b699083a5138fd6e482cca9fa0abp6@Fam70b
2.74e-44FFCP PHASE2:Mm9::chr14:47293487..47293493,-#_3c70b699083a5138fd6e482cca9fa0abp@chr14:47293487..47293493, -
2.74e-44FFCP PHASE1:Mm9::chr16:93971367..93971379,-#_3c70b699083a5138fd6e482cca9fa0abp@chr16:93971367..93971379, -
2.74e-44FFCP PHASE1:Mm9::chr12:13508046..13508055,+#_3c70b699083a5138fd6e482cca9fa0abp@chr12:13508046..13508055, +
2.74e-44FFCP PHASE2:Mm9::chr1:172843813..172843834,-#_3c70b699083a5138fd6e482cca9fa0abp@chr1:172843813..172843834, -
2.74e-44FFCP PHASE1:Mm9::chr1:172843813..172843834,-#_3c70b699083a5138fd6e482cca9fa0abp@chr1:172843813..172843834, -
2.74e-44FFCP PHASE1:Mm9::chr5:30710416..30710440,-#_3c70b699083a5138fd6e482cca9fa0abp2@Otof
2.74e-44FFCP PHASE1:Mm9::chr13:31877112..31877122,+#_3c70b699083a5138fd6e482cca9fa0abp@chr13:31877112..31877122, +
2.74e-44FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_3c70b699083a5138fd6e482cca9fa0abp2@Espnl

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0000855&oldid=3275373"