CL:0000816: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=immature B cell | |name=immature B cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= |
Latest revision as of 16:37, 12 September 2014
Name: | immature B cell |
---|---|
Namespace: | FANTOM |
Definition: | "An immature B cell is a precursor B cell that has the phenotype surface IgM-positive and surface IgD-negative, and have not undergone class immunoglobulin class switching or peripheral encounter with antigen and activation." [GO_REF:0000031, GOC:add, GOC:rhs, GOC:tfm, ISBN:0781735149] |
Synonyms: |
"immature B lymphocyte" EXACT [] "immature B-cell" EXACT [] "immature B-lymphocyte" EXACT [] "newly formed B Cell" EXACT [ISBN:781735149] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000817(precursor B cell) |
---|---|
develops_from: | CL:0000954(small pre-B-II cell) |
Children
disjoint from: | CL:0000785 (mature B cell) |
---|---|
develops from: | CL:0000818 (transitional stage B cell) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000816 (immature B cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data