Personal tools

UBERON:0004537: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0004537
|alt_id=
|name=blood vasculature
|namespace=
|def="a vascular network consisting of blood vessels" [UBERON:cjm]
|xref=TAO:0001079;;ZFA:0001079
|is_a=UBERON:0002049
|synonym="blood vascular network" EXACT [];;"set of blood vessels" EXACT []
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="a vascular network consisting of blood vessels" [UBERON:cjm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0004537
|is_a=UBERON:0002049
|is_obsolete=
|located_in=
|located_in=
|name=blood vasculature
|namespace=
|obo_creation_date=
|part_of=UBERON:0004535
|part_of=UBERON:0004535
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="blood vascular network" EXACT [];;"set of blood vessels" EXACT []
|union_of=
|xref=TAO:0001079;;ZFA:0001079
}}
}}

Revision as of 11:30, 12 September 2014

Name:blood vasculature
Definition:"a vascular network consisting of blood vessels" [UBERON:cjm]
Xrefs:
links:

TAO:0001079

ZFA:0001079
Synonyms: "blood vascular network" EXACT []
"set of blood vessels" EXACT []

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0002049(vasculature)
part_of:UBERON:0004535(cardiovascular system)



Children

is a:UBERON:0011362 (cranial blood vasculature)
part of:UBERON:0001981 (blood vessel)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004537 (blood vasculature), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.37e-99FFCP PHASE1:Hg19::chr8:55370720..55370733,+#_365a286894016376f103e8e605ef6aa3p2@SOX17
4.37e-99FFCP PHASE2:Hg19::chr8:55370720..55370733,+#_365a286894016376f103e8e605ef6aa3p2@SOX17
3.03e-83FFCP PHASE1:Hg19::chr12:96830430..96830450,+#_bea17bf7fc9cf448410a12a349104719p@chr12:96830430..96830450, +
3.03e-83FFCP PHASE2:Hg19::chr12:96830430..96830450,+#_bea17bf7fc9cf448410a12a349104719p@chr12:96830430..96830450, +
9.39e-72FFCP PHASE2:Hg19::chr4:70653649..70653665,-#_464b325123e19316e80c15596eaa7952p4@SULT1B1
9.39e-72FFCP PHASE1:Hg19::chr4:70653649..70653665,-#_464b325123e19316e80c15596eaa7952p4@SULT1B1
1.22e-71FFCP PHASE1:Hg19::chr22:21138343..21138378,+#_03bac4137205e56e56a4977bade909a1p@chr22:21138343..21138378, +
1.22e-71FFCP PHASE2:Hg19::chr22:21138343..21138378,+#_03bac4137205e56e56a4977bade909a1p@chr22:21138343..21138378, +
3.75e-70FFCP PHASE2:Hg19::chr4:70653673..70653688,-#_3be9769ae9861328f383ab77a55f65acp3@SULT1B1
3.75e-70FFCP PHASE1:Hg19::chr4:70653673..70653688,-#_3be9769ae9861328f383ab77a55f65acp3@SULT1B1
4.26e-70FFCP PHASE2:Hg19::chr3:30334038..30334060,+#_af4b0025f2fc8db88fc2b27d41f72df8p@chr3:30334038..30334060, +
4.26e-70FFCP PHASE1:Hg19::chr3:30334038..30334060,+#_af4b0025f2fc8db88fc2b27d41f72df8p@chr3:30334038..30334060, +
1.65e-69FFCP PHASE2:Mm9::chr8:69221163..69221172,+#_e4d1fa0c32c21319874032d8d0d9822dp6@Npy1r
1.65e-69FFCP PHASE1:Mm9::chr8:69221163..69221172,+#_e4d1fa0c32c21319874032d8d0d9822dp6@Npy1r
3.42e-69FFCP PHASE1:Hg19::chr7:22629318..22629324,+#_030418438f1aa32e4d93df87d8880c47p1@ENST00000439823
3.42e-69FFCP PHASE2:Hg19::chr7:22629318..22629324,+#_030418438f1aa32e4d93df87d8880c47p1@ENST00000439823
1.32e-66FFCP PHASE2:Hg19::chr5:54281535..54281547,-#_2f36f689e00521283ee5db2e25b16176p2@ESM1
1.32e-66FFCP PHASE1:Hg19::chr5:54281535..54281547,-#_2f36f689e00521283ee5db2e25b16176p2@ESM1
1.79e-66FFCP PHASE2:Hg19::chr1:186946626..186946652,+#_5c2668f484aecd30aa223aa34a607611p@chr1:186946626..186946652, +
1.79e-66FFCP PHASE1:Hg19::chr1:186946626..186946652,+#_5c2668f484aecd30aa223aa34a607611p@chr1:186946626..186946652, +
2.82e-66FFCP PHASE2:Hg19::chr1:21606171..21606188,-#_26daa5939a0340c4899467035bbf5de9p10@ECE1
2.82e-66FFCP PHASE1:Hg19::chr1:21606171..21606188,-#_26daa5939a0340c4899467035bbf5de9p10@ECE1
1.57e-65FFCP PHASE2:Hg19::chr4:145567563..145567572,+#_2c17ff75d68fae89ad367f7b4a3aa914p8@HHIP
1.57e-65FFCP PHASE1:Hg19::chr4:145567563..145567572,+#_2c17ff75d68fae89ad367f7b4a3aa914p8@HHIP
4.84e-64FFCP PHASE1:Hg19::chr10:4823096..4823144,-#_ad6021bf3574a9bdad7a50cb5e8b0f20p@chr10:4823096..4823144, -
4.84e-64FFCP PHASE2:Hg19::chr10:4823096..4823144,-#_ad6021bf3574a9bdad7a50cb5e8b0f20p@chr10:4823096..4823144, -
1.6e-63FFCP PHASE2:Hg19::chr4:145566841..145566862,+#_00d7bf08e459a35a483fb689e19f0de8p10@HHIP
1.6e-63FFCP PHASE1:Hg19::chr4:145566841..145566862,+#_00d7bf08e459a35a483fb689e19f0de8p10@HHIP
1.6e-62FFCP PHASE2:Hg19::chr22:21138313..21138336,+#_9cff154dfb113ec8f97e32a180ad2f6ap@chr22:21138313..21138336, +
1.6e-62FFCP PHASE1:Hg19::chr22:21138313..21138336,+#_9cff154dfb113ec8f97e32a180ad2f6ap@chr22:21138313..21138336, +
3.56e-60FFCP PHASE2:Hg19::chr11:102668200..102668228,-#_ae637617297d0e9fdbcff43faf25c6cap4@MMP1
3.56e-60FFCP PHASE1:Hg19::chr11:102668200..102668228,-#_ae637617297d0e9fdbcff43faf25c6cap4@MMP1
1.21e-59FFCP PHASE2:Hg19::chr4:145567374..145567390,+#_526fd4feb32364dcd043fe0d88efc054p6@HHIP
1.21e-59FFCP PHASE1:Hg19::chr4:145567374..145567390,+#_526fd4feb32364dcd043fe0d88efc054p6@HHIP
1.43e-59FFCP PHASE1:Hg19::chr5:54281512..54281517,-#_ab2b37e511991f4ac95d93a5d5fff97cp4@ESM1
1.43e-59FFCP PHASE2:Hg19::chr5:54281512..54281517,-#_ab2b37e511991f4ac95d93a5d5fff97cp4@ESM1
7.93e-59FFCP PHASE1:Hg19::chr4:145567426..145567455,+#_a6e8d1431f4f6c1eecea6b13dc1eab1ep5@HHIP
7.93e-59FFCP PHASE2:Hg19::chr4:145567426..145567455,+#_a6e8d1431f4f6c1eecea6b13dc1eab1ep5@HHIP
1.41e-58FFCP PHASE2:Hg19::chr3:149258838..149258848,-#_a680ad0c21de92fb6836f1fa6a884ab1p24@WWTR1
1.41e-58FFCP PHASE1:Hg19::chr3:149258838..149258848,-#_a680ad0c21de92fb6836f1fa6a884ab1p24@WWTR1
5.62e-58FFCP PHASE1:Hg19::chr11:86649508..86649546,-#_8a1fc28ee2d7227c610050c8c37c59c5p@chr11:86649508..86649546, -
5.62e-58FFCP PHASE2:Hg19::chr11:86649508..86649546,-#_8a1fc28ee2d7227c610050c8c37c59c5p@chr11:86649508..86649546, -
8.9e-57FFCP PHASE1:Hg19::chr4:145567391..145567425,+#_8b2bc26c3f52ac7df3bff7805240167fp4@HHIP
8.9e-57FFCP PHASE2:Hg19::chr4:145567391..145567425,+#_8b2bc26c3f52ac7df3bff7805240167fp4@HHIP
4.2e-56FFCP PHASE1:Mm9::chr13:113253807..113253846,+#_57667362dc15222de1deddbc1aaf9e08p4@Il6st
4.2e-56FFCP PHASE2:Mm9::chr8:69221150..69221161,+#_57667362dc15222de1deddbc1aaf9e08p5@Npy1r
4.2e-56FFCP PHASE2:Mm9::chr13:113253807..113253846,+#_57667362dc15222de1deddbc1aaf9e08p4@Il6st
4.2e-56FFCP PHASE1:Mm9::chr8:69221150..69221161,+#_57667362dc15222de1deddbc1aaf9e08p5@Npy1r
4.77e-56FFCP PHASE2:Hg19::chr4:145567356..145567368,+#_84f2e0437766fd90f4ff1f50e78d96dbp7@HHIP
4.77e-56FFCP PHASE1:Hg19::chr4:145567356..145567368,+#_84f2e0437766fd90f4ff1f50e78d96dbp7@HHIP
1.07e-55FFCP PHASE2:Hg19::chr11:102667477..102667490,-#_6893d5150099da5a3b8c50d5712e971bp@chr11:102667477..102667490, -
1.07e-55FFCP PHASE1:Hg19::chr11:102667477..102667490,-#_6893d5150099da5a3b8c50d5712e971bp@chr11:102667477..102667490, -
1.11e-55FFCP PHASE1:Mm9::chr2:65009852..65009866,-#_40595fbf2d7f3ef3938631ec38c45447p@chr2:65009852..65009866, -
1.11e-55FFCP PHASE2:Mm9::chr2:65009852..65009866,-#_40595fbf2d7f3ef3938631ec38c45447p@chr2:65009852..65009866, -
2.0e-55FFCP PHASE1:Hg19::chr11:102668178..102668206,+#_c43a32942da03702995c45cffada4305p@chr11:102668178..102668206, +
2.0e-55FFCP PHASE2:Hg19::chr11:102668178..102668206,+#_c43a32942da03702995c45cffada4305p@chr11:102668178..102668206, +
9.51e-55FFCP PHASE1:Hg19::chr4:86700590..86700615,+#_cfa71f74febcf3fbfb405ad5fb11549ep@chr4:86700590..86700615, +
9.51e-55FFCP PHASE2:Hg19::chr4:86700590..86700615,+#_cfa71f74febcf3fbfb405ad5fb11549ep@chr4:86700590..86700615, +
1.16e-54FFCP PHASE1:Hg19::chr14:63671393..63671437,+#_85150a14fa1749174ccb844271325e75p2@RHOJ
1.16e-54FFCP PHASE2:Hg19::chr14:63671393..63671437,+#_85150a14fa1749174ccb844271325e75p2@RHOJ
5.43e-54FFCP PHASE2:Hg19::chr11:102662162..102662217,-#_255f9cb374ff0997b0283dd411fa491dp@chr11:102662162..102662217, -
5.43e-54FFCP PHASE1:Hg19::chr11:102662162..102662217,-#_255f9cb374ff0997b0283dd411fa491dp@chr11:102662162..102662217, -
1.56e-53FFCP PHASE1:Hg19::chr11:102668074..102668126,-#_488cd8b7f2db474de2c478ab64916831p3@MMP1
1.56e-53FFCP PHASE2:Hg19::chr11:102668074..102668126,-#_488cd8b7f2db474de2c478ab64916831p3@MMP1
2.27e-53FFCP PHASE1:Hg19::chr11:128562673..128562716,-#_4667898436714cdf8f3c9bb9a8f8b010p@chr11:128562673..128562716, -
2.27e-53FFCP PHASE2:Hg19::chr11:128562673..128562716,-#_4667898436714cdf8f3c9bb9a8f8b010p@chr11:128562673..128562716, -
5.18e-53FFCP PHASE2:Hg19::chr4:7846444..7846449,-#_1ca2ae90a76e53f0b5aa38c1b6376c95p@chr4:7846444..7846449, -
5.18e-53FFCP PHASE1:Hg19::chr4:7846444..7846449,-#_1ca2ae90a76e53f0b5aa38c1b6376c95p@chr4:7846444..7846449, -
1.64e-52FFCP PHASE1:Mm9::chr2:112043522..112043530,-#_2287d67ff5c3501011b6be5ae6c68dedp@chr2:112043522..112043530, -
1.64e-52FFCP PHASE2:Mm9::chr11:50416871..50416882,+#_2287d67ff5c3501011b6be5ae6c68dedp5@Adamts2
1.64e-52FFCP PHASE1:Mm9::chrX:160839744..160839754,+#_2287d67ff5c3501011b6be5ae6c68dedp@chrX:160839744..160839754, +
1.64e-52FFCP PHASE2:Mm9::chr17:87574327..87574332,+#_2287d67ff5c3501011b6be5ae6c68dedp@chr17:87574327..87574332, +
1.64e-52FFCP PHASE1:Mm9::chr17:87574327..87574332,+#_2287d67ff5c3501011b6be5ae6c68dedp@chr17:87574327..87574332, +
1.64e-52FFCP PHASE2:Mm9::chr8:69228447..69228492,+#_2287d67ff5c3501011b6be5ae6c68dedp@chr8:69228447..69228492, +
1.64e-52FFCP PHASE1:Mm9::chr11:50416871..50416882,+#_2287d67ff5c3501011b6be5ae6c68dedp5@Adamts2
1.64e-52FFCP PHASE1:Mm9::chr8:69228447..69228492,+#_2287d67ff5c3501011b6be5ae6c68dedp@chr8:69228447..69228492, +
1.64e-52FFCP PHASE1:Mm9::chr2:178190171..178190178,+#_2287d67ff5c3501011b6be5ae6c68dedp@chr2:178190171..178190178, +
1.64e-52FFCP PHASE2:Mm9::chr2:112043522..112043530,-#_2287d67ff5c3501011b6be5ae6c68dedp@chr2:112043522..112043530, -
1.64e-52FFCP PHASE2:Mm9::chrX:160839744..160839754,+#_2287d67ff5c3501011b6be5ae6c68dedp@chrX:160839744..160839754, +
1.64e-52FFCP PHASE2:Mm9::chr17:14827154..14827169,-#_2287d67ff5c3501011b6be5ae6c68dedp@chr17:14827154..14827169, -
1.64e-52FFCP PHASE2:Mm9::chr2:178190171..178190178,+#_2287d67ff5c3501011b6be5ae6c68dedp@chr2:178190171..178190178, +
1.64e-52FFCP PHASE2:Mm9::chr17:14802633..14802637,-#_2287d67ff5c3501011b6be5ae6c68dedp@chr17:14802633..14802637, -
1.64e-52FFCP PHASE1:Mm9::chr17:14802633..14802637,-#_2287d67ff5c3501011b6be5ae6c68dedp@chr17:14802633..14802637, -
1.64e-52FFCP PHASE1:Mm9::chr17:14827154..14827169,-#_2287d67ff5c3501011b6be5ae6c68dedp@chr17:14827154..14827169, -
4.12e-52FFCP PHASE1:Hg19::chr11:102668016..102668028,-#_a2f01502c7e9debdf9a8117770e65a35p5@MMP1
4.12e-52FFCP PHASE2:Hg19::chr11:102668016..102668028,-#_a2f01502c7e9debdf9a8117770e65a35p5@MMP1
9.8e-52FFCP PHASE1:Hg19::chr11:102661517..102661541,-#_d3d561e63bb10a6328f339c2800a2804p@chr11:102661517..102661541, -
9.8e-52FFCP PHASE2:Hg19::chr11:102661517..102661541,-#_d3d561e63bb10a6328f339c2800a2804p@chr11:102661517..102661541, -
1.64e-51FFCP PHASE1:Hg19::chr14:23236579..23236596,+#_f730815936c39a38ca6931f8681b4b98p5@OXA1L
1.64e-51FFCP PHASE2:Hg19::chr14:23236579..23236596,+#_f730815936c39a38ca6931f8681b4b98p5@OXA1L
2.14e-51FFCP PHASE2:Hg19::chr4:145567461..145567482,+#_7945491ebb7e9b7e59ddf5d3755c536ap9@HHIP
2.14e-51FFCP PHASE1:Hg19::chr4:145567461..145567482,+#_7945491ebb7e9b7e59ddf5d3755c536ap9@HHIP
6.64e-51FFCP PHASE2:Hg19::chr4:54931911..54931926,-#_868e8fc0dafeea1c82c1e184cc32b95cp@chr4:54931911..54931926, -
6.64e-51FFCP PHASE1:Hg19::chr4:54931911..54931926,-#_868e8fc0dafeea1c82c1e184cc32b95cp@chr4:54931911..54931926, -
7.65e-51FFCP PHASE2:Hg19::chr4:145567538..145567544,+#_151a01a29031c6cace91e495547952bbp13@HHIP
7.65e-51FFCP PHASE1:Hg19::chr4:145567538..145567544,+#_151a01a29031c6cace91e495547952bbp13@HHIP
2.55e-50FFCP PHASE1:Hg19::chr11:102668708..102668742,+#_6624432e71a73f68779a9741c51634e9p@chr11:102668708..102668742, +
2.55e-50FFCP PHASE2:Hg19::chr11:102668708..102668742,+#_6624432e71a73f68779a9741c51634e9p@chr11:102668708..102668742, +
7.98e-50FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_9a4ea7a9979a2adacc0f01d2933926a6p@chr6:53359400..53359406, +
7.98e-50FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_9a4ea7a9979a2adacc0f01d2933926a6p@chr6:53359400..53359406, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0004537&oldid=3274343"