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{{UBERON
{{UBERON
|id=UBERON:0003608
|alt_id=
|name=hindlimb long bone
|namespace=
|def="A long bone that is part of a hindlimb [Obol]." [OBOL:automatic]
|xref=MA:0000300
|is_a=UBERON:0003464;;UBERON:0003606
|synonym="hind limb long bone" EXACT [OBOL:automatic];;"inferior member long bone" EXACT [OBOL:automatic];;"long bone of hind limb" EXACT [OBOL:automatic];;"long bone of hindlimb" EXACT [OBOL:automatic];;"long bone of inferior member" EXACT [OBOL:automatic];;"long bone of lower extremity" EXACT [OBOL:automatic];;"lower extremity long bone" EXACT [OBOL:automatic]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A long bone that is part of a hindlimb [Obol]." [OBOL:automatic]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0003608
|is_a=UBERON:0003464 ;;UBERON:0003606
|is_obsolete=
|located_in=
|located_in=
|name=hindlimb long bone
|namespace=
|obo_creation_date=
|part_of=UBERON:0002103
|part_of=UBERON:0002103
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="hind limb long bone" EXACT [OBOL:automatic];;"inferior member long bone" EXACT [OBOL:automatic];;"long bone of hind limb" EXACT [OBOL:automatic];;"long bone of hindlimb" EXACT [OBOL:automatic];;"long bone of inferior member" EXACT [OBOL:automatic];;"long bone of lower extremity" EXACT [OBOL:automatic];;"lower extremity long bone" EXACT [OBOL:automatic]
|union_of=
|xref=MA:0000300
}}
}}

Revision as of 11:24, 12 September 2014

Name:hindlimb long bone
Definition:"A long bone that is part of a hindlimb [Obol]." [OBOL:automatic]
Xrefs:
links:
MA:0000300
Synonyms: "hind limb long bone" EXACT [OBOL:automatic]
"inferior member long bone" EXACT [OBOL:automatic]
"long bone of hind limb" EXACT [OBOL:automatic]
"long bone of hindlimb" EXACT [OBOL:automatic]
"long bone of inferior member" EXACT [OBOL:automatic]
"long bone of lower extremity" EXACT [OBOL:automatic]
"lower extremity long bone" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003464(hindlimb bone),UBERON:0003606(limb long bone)
part_of:UBERON:0002103(hindlimb)



Children

is a:UBERON:0000981 (femur)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003608 (hindlimb long bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.4e-49FFCP PHASE1:Mm9::chr11:77624716..77624729,+#_697ff7a62e5c8f2f9b1dd1e9bd61106ep26@Myo18a
3.4e-49FFCP PHASE2:Mm9::chr11:77624716..77624729,+#_697ff7a62e5c8f2f9b1dd1e9bd61106ep26@Myo18a
4.96e-49FFCP PHASE1:Mm9::chr2:32482372..32482381,+#_0bd1d75b03ff1cd3b6fec51a3c6d4914p@chr2:32482372..32482381, +
4.96e-49FFCP PHASE2:Mm9::chr8:75097542..75097549,+#_0bd1d75b03ff1cd3b6fec51a3c6d4914p@chr8:75097542..75097549, +
4.96e-49FFCP PHASE1:Mm9::chr9:21934585..21934591,-#_0bd1d75b03ff1cd3b6fec51a3c6d4914p@chr9:21934585..21934591, -
4.96e-49FFCP PHASE2:Mm9::chr2:32482372..32482381,+#_0bd1d75b03ff1cd3b6fec51a3c6d4914p@chr2:32482372..32482381, +
4.96e-49FFCP PHASE2:Mm9::chr9:21934585..21934591,-#_0bd1d75b03ff1cd3b6fec51a3c6d4914p@chr9:21934585..21934591, -
4.96e-49FFCP PHASE1:Mm9::chr8:75097542..75097549,+#_0bd1d75b03ff1cd3b6fec51a3c6d4914p@chr8:75097542..75097549, +
3.15e-44FFCP PHASE2:Mm9::chr6:51525810..51525817,+#_aa6691cd281ba0e012b67e7ddffed6d1p@chr6:51525810..51525817, +
3.15e-44FFCP PHASE1:Mm9::chr6:51525810..51525817,+#_aa6691cd281ba0e012b67e7ddffed6d1p@chr6:51525810..51525817, +
9.78e-40FFCP PHASE2:Mm9::chr19:4876870..4876880,-#_dc00bf8d34ec74468c5cfb8c12e0631ep@chr19:4876870..4876880, -
9.78e-40FFCP PHASE1:Mm9::chr19:4876870..4876880,-#_dc00bf8d34ec74468c5cfb8c12e0631ep@chr19:4876870..4876880, -
1.15e-39FFCP PHASE2:Mm9::chr11:67063327..67063335,+#_7ade61e7a11deb1cd4b09772212c33f8p@chr11:67063327..67063335, +
1.15e-39FFCP PHASE2:Mm9::chr6:4490674..4490679,+#_7ade61e7a11deb1cd4b09772212c33f8p@chr6:4490674..4490679, +
1.15e-39FFCP PHASE1:Mm9::chr1:174140324..174140335,-#_7ade61e7a11deb1cd4b09772212c33f8p@chr1:174140324..174140335, -
1.15e-39FFCP PHASE2:Mm9::chr16:24096441..24096449,+#_7ade61e7a11deb1cd4b09772212c33f8p@chr16:24096441..24096449, +
1.15e-39FFCP PHASE1:Mm9::chr16:24096441..24096449,+#_7ade61e7a11deb1cd4b09772212c33f8p@chr16:24096441..24096449, +
1.15e-39FFCP PHASE1:Mm9::chr6:4490674..4490679,+#_7ade61e7a11deb1cd4b09772212c33f8p@chr6:4490674..4490679, +
1.15e-39FFCP PHASE2:Mm9::chr1:174140324..174140335,-#_7ade61e7a11deb1cd4b09772212c33f8p@chr1:174140324..174140335, -
1.15e-39FFCP PHASE1:Mm9::chr11:67063327..67063335,+#_7ade61e7a11deb1cd4b09772212c33f8p@chr11:67063327..67063335, +
1.55e-39FFCP PHASE1:Mm9::chr1:174143249..174143260,-#_676eaa36ded562f8af1adb3cc7104d92p@chr1:174143249..174143260, -
1.55e-39FFCP PHASE2:Mm9::chr1:174143249..174143260,-#_676eaa36ded562f8af1adb3cc7104d92p@chr1:174143249..174143260, -
3.03e-39FFCP PHASE1:Mm9::chr6:51525869..51525891,+#_40641361461e04738e278feed32ee68bp@chr6:51525869..51525891, +
3.03e-39FFCP PHASE2:Mm9::chr6:51525869..51525891,+#_40641361461e04738e278feed32ee68bp@chr6:51525869..51525891, +
9.31e-39FFCP PHASE2:Mm9::chr11:102130083..102130092,+#_17d3c082f496917e919dc00b7f923298p3@Asb16
9.31e-39FFCP PHASE1:Mm9::chr11:102130083..102130092,+#_17d3c082f496917e919dc00b7f923298p3@Asb16
2.41e-35FFCP PHASE2:Mm9::chr7:133604286..133604297,-#_9beb142cfbbc4d35bf4998a6522dd317p@chr7:133604286..133604297, -
2.41e-35FFCP PHASE1:Mm9::chr7:133604286..133604297,-#_9beb142cfbbc4d35bf4998a6522dd317p@chr7:133604286..133604297, -
2.95e-35FFCP PHASE1:Mm9::chr4:138365748..138365759,-#_a6bd10da5e7ff119246f7daea776ab60p5@Pla2g5
2.95e-35FFCP PHASE2:Mm9::chr4:138365748..138365759,-#_a6bd10da5e7ff119246f7daea776ab60p5@Pla2g5
9.53e-34FFCP PHASE2:Mm9::chr8:74049600..74049612,-#_eb67d3e5c971b9cd3bc0dad3bc7724ecp2@uc009mdq.1
9.53e-34FFCP PHASE1:Mm9::chr8:74049600..74049612,-#_eb67d3e5c971b9cd3bc0dad3bc7724ecp2@uc009mdq.1
1.23e-33FFCP PHASE1:Mm9::chr2:164773241..164773248,+#_29a91de172f8cb4f1e54f34491cad089p3@Mmp9
1.23e-33FFCP PHASE2:Mm9::chr2:164773241..164773248,+#_29a91de172f8cb4f1e54f34491cad089p3@Mmp9
1.58e-33FFCP PHASE2:Mm9::chr7:3567707..3567718,-#_0da6f7269d9ffae6b800dc085abfeb7fp2@Oscar
1.58e-33FFCP PHASE2:Mm9::chr1:166815111..166815121,-#_0da6f7269d9ffae6b800dc085abfeb7fp@chr1:166815111..166815121, -
1.58e-33FFCP PHASE1:Mm9::chr7:3567707..3567718,-#_0da6f7269d9ffae6b800dc085abfeb7fp2@Oscar
1.58e-33FFCP PHASE1:Mm9::chr1:166815111..166815121,-#_0da6f7269d9ffae6b800dc085abfeb7fp@chr1:166815111..166815121, -
2.04e-33FFCP PHASE1:Mm9::chr11:75409652..75409664,+#_13240eca7bf26894be4458875ab5c83dp@chr11:75409652..75409664, +
2.04e-33FFCP PHASE2:Mm9::chr11:75409652..75409664,+#_13240eca7bf26894be4458875ab5c83dp@chr11:75409652..75409664, +
2.04e-33FFCP PHASE2:Mm9::chr9:70799951..70799962,-#_13240eca7bf26894be4458875ab5c83dp4@Lipc
2.04e-33FFCP PHASE1:Mm9::chr9:70799951..70799962,-#_13240eca7bf26894be4458875ab5c83dp4@Lipc
3.38e-33FFCP PHASE2:Mm9::chr15:102196702..102196713,-#_f58a9a1e0311cc884fa543491079b944p6@Sp7
3.38e-33FFCP PHASE1:Mm9::chr15:102196702..102196713,-#_f58a9a1e0311cc884fa543491079b944p6@Sp7
7.17e-33FFCP PHASE2:Mm9::chr18:76271498..76271508,+#_a208eb6e45456f99067955a7db1720aap@chr18:76271498..76271508, +
7.17e-33FFCP PHASE1:Mm9::chr18:76271498..76271508,+#_a208eb6e45456f99067955a7db1720aap@chr18:76271498..76271508, +
7.17e-33FFCP PHASE2:Mm9::chr8:126415826..126415839,+#_a208eb6e45456f99067955a7db1720aap@chr8:126415826..126415839, +
7.17e-33FFCP PHASE1:Mm9::chr8:126415826..126415839,+#_a208eb6e45456f99067955a7db1720aap@chr8:126415826..126415839, +
2.67e-30FFCP PHASE1:Mm9::chr2:32482387..32482399,+#_4306134014c4128a4c9235ef953097b5p@chr2:32482387..32482399, +
2.67e-30FFCP PHASE2:Mm9::chr2:32482387..32482399,+#_4306134014c4128a4c9235ef953097b5p@chr2:32482387..32482399, +
1.1e-29FFCP PHASE2:Mm9::chr12:70396969..70396979,+#_4dee7de355721a85341dfd1404556055p@chr12:70396969..70396979, +
1.1e-29FFCP PHASE2:Mm9::chr15:58649683..58649688,-#_4dee7de355721a85341dfd1404556055p@chr15:58649683..58649688, -
1.1e-29FFCP PHASE1:Mm9::chr12:70396969..70396979,+#_4dee7de355721a85341dfd1404556055p@chr12:70396969..70396979, +
1.1e-29FFCP PHASE1:Mm9::chr15:58649683..58649688,-#_4dee7de355721a85341dfd1404556055p@chr15:58649683..58649688, -
1.46e-29FFCP PHASE2:Mm9::chr7:133590998..133591009,-#_e95d901efa9e388f2c8b56f5a7a59474p@chr7:133590998..133591009, -
1.46e-29FFCP PHASE1:Mm9::chr7:133590998..133591009,-#_e95d901efa9e388f2c8b56f5a7a59474p@chr7:133590998..133591009, -
1.73e-29FFCP PHASE1:Mm9::chr18:60751417..60751432,-#_a84de45b09fae48131bd23a186de5e13p2@Myoz3
1.73e-29FFCP PHASE2:Mm9::chr18:60751417..60751432,-#_a84de45b09fae48131bd23a186de5e13p2@Myoz3
2.42e-29FFCP PHASE2:Mm9::chr11:67051354..67051366,+#_e606af3f9afda10fccf24c0cc0690efbp2@Myh4
2.42e-29FFCP PHASE1:Mm9::chr11:67051354..67051366,+#_e606af3f9afda10fccf24c0cc0690efbp2@Myh4
7.46e-29FFCP PHASE1:Mm9::chr1:57155729..57155740,-#_5a4f283aace94c434cf3bf1704dcb3d0p@chr1:57155729..57155740, -
7.46e-29FFCP PHASE2:Mm9::chr1:57155729..57155740,-#_5a4f283aace94c434cf3bf1704dcb3d0p@chr1:57155729..57155740, -
9.26e-29FFCP PHASE1:Mm9::chr4:43597258..43597265,-#_28da688b698aec685e7e0941ae2cf3cap1@Msmp
9.26e-29FFCP PHASE1:Mm9::chr11:67056544..67056589,-#_28da688b698aec685e7e0941ae2cf3cap@chr11:67056544..67056589, -
9.26e-29FFCP PHASE2:Mm9::chr11:67056544..67056589,-#_28da688b698aec685e7e0941ae2cf3cap@chr11:67056544..67056589, -
9.26e-29FFCP PHASE2:Mm9::chr4:43597258..43597265,-#_28da688b698aec685e7e0941ae2cf3cap1@Msmp
1.15e-28FFCP PHASE2:Mm9::chrY:2858251..2858257,+#_9de672da81fe673d8ab3bf0c35c32958p@chrY:2858251..2858257, +
1.15e-28FFCP PHASE2:Mm9::chr6:90552017..90552024,+#_9de672da81fe673d8ab3bf0c35c32958p@chr6:90552017..90552024, +
1.15e-28FFCP PHASE1:Mm9::chr6:90552017..90552024,+#_9de672da81fe673d8ab3bf0c35c32958p@chr6:90552017..90552024, +
1.15e-28FFCP PHASE1:Mm9::chrY:2858251..2858257,+#_9de672da81fe673d8ab3bf0c35c32958p@chrY:2858251..2858257, +
1.43e-28FFCP PHASE1:Mm9::chr6:34436258..34436292,+#_03b346c5758dd45ceb511a5fb8e96e81p@chr6:34436258..34436292, +
1.43e-28FFCP PHASE2:Mm9::chr6:34436258..34436292,+#_03b346c5758dd45ceb511a5fb8e96e81p@chr6:34436258..34436292, +
2.2e-28FFCP PHASE2:Mm9::chr11:67069796..67069817,-#_0eefbdb77af894ca146e51dbb0704653p@chr11:67069796..67069817, -
2.2e-28FFCP PHASE1:Mm9::chr11:67069796..67069817,-#_0eefbdb77af894ca146e51dbb0704653p@chr11:67069796..67069817, -
2.72e-28FFCP PHASE2:Mm9::chr8:107702369..107702386,+#_fa6873e774fdb0eed6e33c5604737b55p@chr8:107702369..107702386, +
2.72e-28FFCP PHASE1:Mm9::chr8:107702369..107702386,+#_fa6873e774fdb0eed6e33c5604737b55p@chr8:107702369..107702386, +
3.45e-28FFCP PHASE2:Mm9::chr18:78254135..78254146,-#_c7f69e5fe89944921b828b1c480458adp1@Siglec15
3.45e-28FFCP PHASE1:Mm9::chr18:78254135..78254146,-#_c7f69e5fe89944921b828b1c480458adp1@Siglec15
6.5e-28FFCP PHASE2:Mm9::chr7:133591490..133591500,-#_31c6aac4332691eeb849136d8325c12dp6@Atp2a1
6.5e-28FFCP PHASE1:Mm9::chr7:133591490..133591500,-#_31c6aac4332691eeb849136d8325c12dp6@Atp2a1
8.9e-28FFCP PHASE2:Mm9::chr7:133591156..133591165,-#_8778d5a6d88bf473a373ba433643fcaep7@Atp2a1
8.9e-28FFCP PHASE1:Mm9::chr7:133591156..133591165,-#_8778d5a6d88bf473a373ba433643fcaep7@Atp2a1
1.42e-27FFCP PHASE2:Mm9::chr7:133600635..133600663,+#_a6c5a089f09077376ffc00ca107e57e3p@chr7:133600635..133600663, +
1.42e-27FFCP PHASE1:Mm9::chr7:133600635..133600663,+#_a6c5a089f09077376ffc00ca107e57e3p@chr7:133600635..133600663, +
1.42e-27FFCP PHASE2:Mm9::chr7:133592162..133592188,-#_a6c5a089f09077376ffc00ca107e57e3p@chr7:133592162..133592188, -
1.42e-27FFCP PHASE1:Mm9::chr7:133592162..133592188,-#_a6c5a089f09077376ffc00ca107e57e3p@chr7:133592162..133592188, -
6.75e-27FFCP PHASE2:Mm9::chr11:94837662..94837673,-#_607f7641cb5c0ef82f6a895aa9ed323bp4@Sgca
6.75e-27FFCP PHASE1:Mm9::chr11:94837662..94837673,-#_607f7641cb5c0ef82f6a895aa9ed323bp4@Sgca
1.66e-26FFCP PHASE2:Mm9::chr5:104754379..104754387,+#_dc6cf5eafaddfd2dee90b30506943031p1@Mepe
1.66e-26FFCP PHASE1:Mm9::chr5:104754379..104754387,+#_dc6cf5eafaddfd2dee90b30506943031p1@Mepe
3.47e-26FFCP PHASE1:Mm9::chr12:81581216..81581231,+#_330fa101f7a8429cf603b6a6b1afc6a1p@chr12:81581216..81581231, +
3.47e-26FFCP PHASE1:Mm9::chr16:32400888..32400899,+#_330fa101f7a8429cf603b6a6b1afc6a1p2@Tm4sf19
3.47e-26FFCP PHASE2:Mm9::chr12:81581216..81581231,+#_330fa101f7a8429cf603b6a6b1afc6a1p@chr12:81581216..81581231, +
3.47e-26FFCP PHASE2:Mm9::chr16:32400888..32400899,+#_330fa101f7a8429cf603b6a6b1afc6a1p2@Tm4sf19
1.12e-25FFCP PHASE2:Mm9::chr17:34176173..34176200,+#_c1d2f6cc711c9cfb38bbcbd0c3e279dfp5@Col11a2
1.12e-25FFCP PHASE2:Mm9::chr15:97806574..97806585,-#_c1d2f6cc711c9cfb38bbcbd0c3e279dfp@chr15:97806574..97806585, -
1.12e-25FFCP PHASE1:Mm9::chr15:97806574..97806585,-#_c1d2f6cc711c9cfb38bbcbd0c3e279dfp@chr15:97806574..97806585, -
1.12e-25FFCP PHASE1:Mm9::chr17:34176173..34176200,+#_c1d2f6cc711c9cfb38bbcbd0c3e279dfp5@Col11a2
1.36e-25FFCP PHASE1:Mm9::chr18:78254174..78254185,-#_af77d9cfeb324278e425d62d2c793951p2@Siglec15
1.36e-25FFCP PHASE2:Mm9::chr18:78254174..78254185,-#_af77d9cfeb324278e425d62d2c793951p2@Siglec15

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0003608&oldid=3274249"