Personal tools

UBERON:0002118: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0002118
|alt_id=UBERON:FMA_7213-MA_0001705
|name=right ovary
|namespace=
|def="An ovary that is part of a right side of organism [Obol]." [OBOL:automatic]
|xref=FMA:7213;;MA:0001705;;ncithesaurus:Right_Ovary;;SCTID:280123002
|is_a=UBERON:0000992
|synonym=
|comment=This class was created automatically from a combination of ontologies
|comment=This class was created automatically from a combination of ontologies
|alt_id=UBERON:FMA_7213-MA_0001705
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="An ovary that is part of a right side of organism [Obol]." [OBOL:automatic]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0002118
|is_a=UBERON:0000992 ;;UBERON:0015212
|is_obsolete=
|located_in=
|located_in=
|name=right ovary
|namespace=
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=FMA:7213;;MA:0001705;;ncithesaurus:Right_Ovary;;SCTID:280123002
}}
}}

Revision as of 11:11, 12 September 2014

Name:right ovary
Definition:"An ovary that is part of a right side of organism [Obol]." [OBOL:automatic]
Xrefs:
links:

FMA:7213
MA:0001705
ncithesaurus:Right_Ovary

SCTID:280123002
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_7213-MA_0001705

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000992(female gonad),UBERON:0015212(lateral structure)



Children

derives from:FF:0000275 (human mesenchymal precursor cell- ovarian cancer-right ovary sample)
part of:FF:0000275 (human mesenchymal precursor cell- ovarian cancer-right ovary sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

  • 11757-123H2 (mesenchymal precursor cell - ovarian cancer right ovary, donor1)
  • 11759-123H4 (mesenchymal precursor cell - ovarian cancer right ovary, donor2)
  • 11761-123H6 (mesenchymal precursor cell - ovarian cancer right ovary, donor3 (SOC-57-02))
  • 11834-124G7
  • 11837-124H1 (mesenchymal precursor cell - ovarian cancer right ovary, donor4)
  • 11842-124H6 (mesenchymal precursor cell - ovarian cancer right ovary, donor3 (SOC-57-02-G))
  • 11844-124H8


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002118 (right ovary), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
7.56e-70FFCP PHASE2:Hg19::chr5:81654586..81654599,+#_3f8ef141b62d25ecf9f4a8a75ec50f13p@chr5:81654586..81654599, +
7.56e-70FFCP PHASE1:Hg19::chr5:81654586..81654599,+#_3f8ef141b62d25ecf9f4a8a75ec50f13p@chr5:81654586..81654599, +
1.87e-43FFCP PHASE1:Hg19::chr8:38008450..38008459,-#_4bbdf431d3f5e7e44c8213c3b7237c44p4@STAR
1.87e-43FFCP PHASE2:Hg19::chr8:38008450..38008459,-#_4bbdf431d3f5e7e44c8213c3b7237c44p4@STAR
1.48e-40FFCP PHASE2:Hg19::chr5:169812..169816,+#_54c84529f86f510840ad11c1bf8ed7acp@chr5:169812..169816, +
1.48e-40FFCP PHASE1:Hg19::chr5:169812..169816,+#_54c84529f86f510840ad11c1bf8ed7acp@chr5:169812..169816, +
3.91e-40FFCP PHASE2:Hg19::chr5:81654563..81654582,+#_761cec943f6551617b955a43aab9191bp@chr5:81654563..81654582, +
3.91e-40FFCP PHASE1:Hg19::chr5:81654563..81654582,+#_761cec943f6551617b955a43aab9191bp@chr5:81654563..81654582, +
6.51e-40FFCP PHASE1:Hg19::chr9:6257179..6257191,+#_7b1f1a43b8794d6e21f8378fcb00fe7ep@chr9:6257179..6257191, +
6.51e-40FFCP PHASE2:Hg19::chr9:6257179..6257191,+#_7b1f1a43b8794d6e21f8378fcb00fe7ep@chr9:6257179..6257191, +
2.88e-36FFCP PHASE1:Hg19::chr9:73021521..73021525,-#_b26a4609c9e57603c4b07d828840dc58p@chr9:73021521..73021525, -
2.88e-36FFCP PHASE2:Hg19::chr9:73021521..73021525,-#_b26a4609c9e57603c4b07d828840dc58p@chr9:73021521..73021525, -
4.13e-36FFCP PHASE2:Hg19::chr4:38143865..38143904,-#_0fa0dba9930a11f97be3e26b0dc542e1p@chr4:38143865..38143904, -
4.13e-36FFCP PHASE1:Hg19::chr4:38143865..38143904,-#_0fa0dba9930a11f97be3e26b0dc542e1p@chr4:38143865..38143904, -
5.25e-36FFCP PHASE1:Hg19::chr9:118453758..118453772,+#_a5ad8292e3c1a1a3f6cc46b437d3079dp@chr9:118453758..118453772, +
5.25e-36FFCP PHASE2:Hg19::chr9:118453758..118453772,+#_a5ad8292e3c1a1a3f6cc46b437d3079dp@chr9:118453758..118453772, +
2.62e-34FFCP PHASE2:Hg19::chr16:88278862..88278869,-#_216f3fac12b00d6d1eaeda1e166f823ap@chr16:88278862..88278869, -
2.62e-34FFCP PHASE1:Hg19::chr16:88278862..88278869,-#_216f3fac12b00d6d1eaeda1e166f823ap@chr16:88278862..88278869, -
1.18e-33FFCP PHASE2:Hg19::chr4:90332316..90332323,+#_3218f16c778f537caa07c49959e3b118p@chr4:90332316..90332323, +
1.18e-33FFCP PHASE1:Hg19::chr4:90332316..90332323,+#_3218f16c778f537caa07c49959e3b118p@chr4:90332316..90332323, +
6.67e-33FFCP PHASE2:Hg19::chr6:121843766..121843798,+#_0ea79d74c09a62d9345ac0bfa8951599p@chr6:121843766..121843798, +
6.67e-33FFCP PHASE1:Hg19::chr6:121843766..121843798,+#_0ea79d74c09a62d9345ac0bfa8951599p@chr6:121843766..121843798, +
9.25e-33FFCP PHASE2:Hg19::chr11:36477288..36477291,-#_6159cc6e91636c79b35d955e9959017bp@chr11:36477288..36477291, -
9.25e-33FFCP PHASE1:Hg19::chr11:36477288..36477291,-#_6159cc6e91636c79b35d955e9959017bp@chr11:36477288..36477291, -
1.05e-32FFCP PHASE2:Hg19::chr21:39678875..39678880,-#_088fe416e9b6031fff23a2fa525248f5p@chr21:39678875..39678880, -
1.05e-32FFCP PHASE1:Hg19::chr21:39678875..39678880,-#_088fe416e9b6031fff23a2fa525248f5p@chr21:39678875..39678880, -
1.99e-32FFCP PHASE1:Hg19::chr12:127737083..127737103,-#_9a38ebfd3d5310790b1c5587c0796f06p@chr12:127737083..127737103, -
1.99e-32FFCP PHASE2:Hg19::chr12:127737083..127737103,-#_9a38ebfd3d5310790b1c5587c0796f06p@chr12:127737083..127737103, -
5.55e-32FFCP PHASE1:Hg19::chr19:41985620..41985625,-#_e3b2402663bfd124f59877050fb569eep@chr19:41985620..41985625, -
5.55e-32FFCP PHASE2:Hg19::chr19:41985620..41985625,-#_e3b2402663bfd124f59877050fb569eep@chr19:41985620..41985625, -
1.66e-31FFCP PHASE2:Hg19::chr18:53169326..53169330,-#_edf754fa93311e71b662325051592ec8p@chr18:53169326..53169330, -
1.66e-31FFCP PHASE1:Hg19::chr18:53169326..53169330,-#_edf754fa93311e71b662325051592ec8p@chr18:53169326..53169330, -
3.8e-31FFCP PHASE1:Hg19::chr8:38008485..38008499,-#_c603fa117a66b1f8874e713e2a562d4dp3@STAR
3.8e-31FFCP PHASE2:Hg19::chr8:38008485..38008499,-#_c603fa117a66b1f8874e713e2a562d4dp3@STAR
1.05e-30FFCP PHASE2:Hg19::chr5:16540745..16540752,+#_b075defc7c9a0bdfd945c69dd11b95a4p@chr5:16540745..16540752, +
1.05e-30FFCP PHASE1:Hg19::chr5:16540745..16540752,+#_b075defc7c9a0bdfd945c69dd11b95a4p@chr5:16540745..16540752, +
1.56e-30FFCP PHASE1:Hg19::chr9:83566735..83566738,+#_882b18ba390a2b6dab0744a74aeccd3dp@chr9:83566735..83566738, +
1.56e-30FFCP PHASE2:Hg19::chr9:83566735..83566738,+#_882b18ba390a2b6dab0744a74aeccd3dp@chr9:83566735..83566738, +
9.2e-30FFCP PHASE2:Hg19::chr3:197639921..197639934,-#_238ea86ca67d00c49ad9484fcea22a5dp6@IQCG
9.2e-30FFCP PHASE1:Hg19::chr3:197639921..197639934,-#_238ea86ca67d00c49ad9484fcea22a5dp6@IQCG
7.13e-29FFCP PHASE1:Hg19::chr9:127269661..127269719,-#_dd4f3d58e5648cd751fdf1a8bea14914p1@NR5A1
7.13e-29FFCP PHASE2:Hg19::chr9:127269661..127269719,-#_dd4f3d58e5648cd751fdf1a8bea14914p1@NR5A1
3.66e-28FFCP PHASE2:Hg19::chr4:177713372..177713387,-#_b4b7e3c0ab876c417304a7689ffa9e42p14@VEGFC
3.66e-28FFCP PHASE1:Hg19::chr4:177713372..177713387,-#_b4b7e3c0ab876c417304a7689ffa9e42p14@VEGFC
1.79e-27FFCP PHASE2:Hg19::chr2:1048832..1048860,+#_c4992849ac154ab9a4256bad04822072p@chr2:1048832..1048860, +
1.79e-27FFCP PHASE1:Hg19::chr2:1048832..1048860,+#_c4992849ac154ab9a4256bad04822072p@chr2:1048832..1048860, +
2.05e-27FFCP PHASE2:Hg19::chr5:64469134..64469150,-#_e6fde733c652570bf385d82dd24d22a0p@chr5:64469134..64469150, -
2.05e-27FFCP PHASE1:Hg19::chr5:64469134..64469150,-#_e6fde733c652570bf385d82dd24d22a0p@chr5:64469134..64469150, -
3.55e-27FFCP PHASE2:Hg19::chr16:88337786..88337798,-#_f45aad12dccd380ffcd4774545ec624ap@chr16:88337786..88337798, -
3.55e-27FFCP PHASE1:Hg19::chr16:88337786..88337798,-#_f45aad12dccd380ffcd4774545ec624ap@chr16:88337786..88337798, -
3.94e-26FFCP PHASE1:Hg19::chr6:14671928..14671958,+#_75b720d4eb12646dd460b64bf051017bp@chr6:14671928..14671958, +
3.94e-26FFCP PHASE2:Hg19::chr6:14671928..14671958,+#_75b720d4eb12646dd460b64bf051017bp@chr6:14671928..14671958, +
4.68e-26FFCP PHASE2:Hg19::chr13:44794616..44794621,+#_44fd6b76b25d0fa66f4dc810de9ec655p@chr13:44794616..44794621, +
4.68e-26FFCP PHASE1:Hg19::chr13:44794616..44794621,+#_44fd6b76b25d0fa66f4dc810de9ec655p@chr13:44794616..44794621, +
1.13e-25FFCP PHASE2:Hg19::chr5:136482422..136482426,+#_bd8d61f1358011e6771be58bd1afa8c8p@chr5:136482422..136482426, +
1.13e-25FFCP PHASE1:Hg19::chr5:136482422..136482426,+#_bd8d61f1358011e6771be58bd1afa8c8p@chr5:136482422..136482426, +
9.4e-25FFCP PHASE1:Hg19::chr9:6256728..6256739,+#_4982064555a72db1298ed2deb5e5c718p@chr9:6256728..6256739, +
9.4e-25FFCP PHASE2:Hg19::chr9:6256728..6256739,+#_4982064555a72db1298ed2deb5e5c718p@chr9:6256728..6256739, +
1.53e-24FFCP PHASE2:Hg19::chr2:40270530..40270541,+#_8af9e9665cbfae04b248b7dcd53f713cp@chr2:40270530..40270541, +
1.53e-24FFCP PHASE1:Hg19::chr2:40270530..40270541,+#_8af9e9665cbfae04b248b7dcd53f713cp@chr2:40270530..40270541, +
8.09e-24FFCP PHASE2:Hg19::chr1:222079924..222079927,-#_18f915a50b1b8bf2b2b7540708cdc12dp@chr1:222079924..222079927, -
8.09e-24FFCP PHASE1:Hg19::chr1:222079924..222079927,-#_18f915a50b1b8bf2b2b7540708cdc12dp@chr1:222079924..222079927, -
8.93e-24FFCP PHASE1:Hg19::chr10:74096608..74096630,-#_826fb267245c8360c8670bd3939d399ep8@DNAJB12
8.93e-24FFCP PHASE2:Hg19::chr10:74096608..74096630,-#_826fb267245c8360c8670bd3939d399ep8@DNAJB12
2.27e-23FFCP PHASE2:Hg19::chr2:135168804..135168814,+#_0d6241f83ee46a0e61d85981dc6ce280p@chr2:135168804..135168814, +
2.27e-23FFCP PHASE1:Hg19::chr2:135168804..135168814,+#_0d6241f83ee46a0e61d85981dc6ce280p@chr2:135168804..135168814, +
2.94e-23FFCP PHASE1:Hg19::chr7:22637806..22637822,+#_97d61a5a73b2c2aa7dbff072c77b950ap@chr7:22637806..22637822, +
2.94e-23FFCP PHASE2:Hg19::chr7:22637806..22637822,+#_97d61a5a73b2c2aa7dbff072c77b950ap@chr7:22637806..22637822, +
4.96e-23FFCP PHASE1:Hg19::chr6:83073074..83073093,+#_97b1eaa9a46af83c842b9a7a5ce91229p15@TPBG
4.96e-23FFCP PHASE2:Hg19::chr6:83073074..83073093,+#_97b1eaa9a46af83c842b9a7a5ce91229p15@TPBG
1.11e-22FFCP PHASE2:Hg19::chr2:162931138..162931149,-#_9d7dccdfd5bbf54b5ce43d04fb1c747bp14@DPP4
1.11e-22FFCP PHASE1:Hg19::chr2:162931138..162931149,-#_9d7dccdfd5bbf54b5ce43d04fb1c747bp14@DPP4
5.82e-22FFCP PHASE2:Hg19::chr3:101909187..101909198,+#_d9230a009944bfdd094adfb69454a243p@chr3:101909187..101909198, +
5.82e-22FFCP PHASE1:Hg19::chr3:101909187..101909198,+#_d9230a009944bfdd094adfb69454a243p@chr3:101909187..101909198, +
1.28e-21FFCP PHASE2:Hg19::chr4:167068286..167068320,+#_b2988843d9ede78a087a2be1c265fce6p@chr4:167068286..167068320, +
1.28e-21FFCP PHASE1:Hg19::chr4:167068286..167068320,+#_b2988843d9ede78a087a2be1c265fce6p@chr4:167068286..167068320, +
2.98e-21FFCP PHASE2:Hg19::chr21:46806914..46806921,+#_4645a39c50da0bf4566361e13e6139b9p@chr21:46806914..46806921, +
2.98e-21FFCP PHASE1:Hg19::chr21:46806914..46806921,+#_4645a39c50da0bf4566361e13e6139b9p@chr21:46806914..46806921, +
4.88e-21FFCP PHASE2:Hg19::chr15:96828688..96828704,-#_dbf8a767ea65f702a88b33f7f3e1b4c4p@chr15:96828688..96828704, -
4.88e-21FFCP PHASE1:Hg19::chr15:96828688..96828704,-#_dbf8a767ea65f702a88b33f7f3e1b4c4p@chr15:96828688..96828704, -
5.15e-21FFCP PHASE2:Hg19::chr1:180240503..180240504,-#_5607874d53f4ffe09d8b7b9332ae7a54p@chr1:180240503..180240504, -
5.15e-21FFCP PHASE2:Hg19::chr20:39536980..39536981,+#_5607874d53f4ffe09d8b7b9332ae7a54p@chr20:39536980..39536981, +
5.15e-21FFCP PHASE1:Hg19::chr20:39536980..39536981,+#_5607874d53f4ffe09d8b7b9332ae7a54p@chr20:39536980..39536981, +
5.15e-21FFCP PHASE2:Hg19::chr2:159992786..159992791,+#_5607874d53f4ffe09d8b7b9332ae7a54p20@TANC1
5.15e-21FFCP PHASE1:Hg19::chr1:180240503..180240504,-#_5607874d53f4ffe09d8b7b9332ae7a54p@chr1:180240503..180240504, -
5.15e-21FFCP PHASE1:Hg19::chr2:159992786..159992791,+#_5607874d53f4ffe09d8b7b9332ae7a54p20@TANC1
5.15e-21FFCP PHASE2:Hg19::chr5:173377093..173377094,-#_5607874d53f4ffe09d8b7b9332ae7a54p@chr5:173377093..173377094, -
5.15e-21FFCP PHASE1:Hg19::chr5:173377093..173377094,-#_5607874d53f4ffe09d8b7b9332ae7a54p@chr5:173377093..173377094, -
6.65e-21FFCP PHASE2:Hg19::chr4:16587693..16587715,-#_ee861e179fb7831f8613cd961ac7c7f5p@chr4:16587693..16587715, -
6.65e-21FFCP PHASE1:Hg19::chr4:16587693..16587715,-#_ee861e179fb7831f8613cd961ac7c7f5p@chr4:16587693..16587715, -
6.65e-21FFCP PHASE2:Hg19::chr3:141088551..141088556,+#_ee861e179fb7831f8613cd961ac7c7f5p@chr3:141088551..141088556, +
6.65e-21FFCP PHASE1:Hg19::chr3:141088551..141088556,+#_ee861e179fb7831f8613cd961ac7c7f5p@chr3:141088551..141088556, +
7.17e-21FFCP PHASE2:Hg19::chr3:197640161..197640186,-#_1dd594584f8accbaac7b0bff5370f1f3p5@IQCG
7.17e-21FFCP PHASE1:Hg19::chr3:197640161..197640186,-#_1dd594584f8accbaac7b0bff5370f1f3p5@IQCG
7.35e-21FFCP PHASE2:Hg19::chr12:41374693..41374709,+#_5589b13750c94e26c39b8c093df95d75p@chr12:41374693..41374709, +
7.35e-21FFCP PHASE1:Hg19::chr12:41374693..41374709,+#_5589b13750c94e26c39b8c093df95d75p@chr12:41374693..41374709, +
1.02e-20FFCP PHASE2:Hg19::chr12:65951524..65951527,+#_d299d81b0c5ec8f85649de39d7ed446bp@chr12:65951524..65951527, +
1.02e-20FFCP PHASE1:Hg19::chr12:65951524..65951527,+#_d299d81b0c5ec8f85649de39d7ed446bp@chr12:65951524..65951527, +
1.34e-20FFCP PHASE2:Hg19::chr18:25692201..25692205,+#_4dc22b33a3b51d030c1707cfc5a7921cp@chr18:25692201..25692205, +
1.34e-20FFCP PHASE1:Hg19::chr18:25692201..25692205,+#_4dc22b33a3b51d030c1707cfc5a7921cp@chr18:25692201..25692205, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0002118&oldid=3274060"