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{{CL
{{CL
|id=CL:0002374
|alt_id=
|name=ear hair cell
|namespace=cell
|def="A hair cell of the ear that contains the organs of balance and hearing." [GOC:dph, GOC:tfm, ISBN:0192801023]
|xref=
|is_a=CL:0000855
|synonym="ear receptor cell" EXACT []
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-09-24T01:49:31Z
|def="A hair cell of the ear that contains the organs of balance and hearing." [GOC:dph, GOC:tfm, ISBN:0192801023]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002374
|is_a=CL:0000855
|is_obsolete=
|located_in=
|located_in=
|name=ear hair cell
|namespace=cell
|obo_creation_date=2010-09-24T01:49:31Z
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="ear receptor cell" EXACT []
|union_of=
|xref=
}}
}}

Revision as of 10:26, 12 September 2014

Name:ear hair cell
Namespace:cell
Definition:"A hair cell of the ear that contains the organs of balance and hearing." [GOC:dph, GOC:tfm, ISBN:0192801023]
Synonyms: "ear receptor cell" EXACT []
Created by:tmeehan
Creation date:2010-09-24T01:49:31Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000855(sensory hair cell)



Children


is a:CL:0000202 (auditory hair cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)

Mouse (Mus musculus)

  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002374 (ear hair cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE2:Mm9::chr6:36966723..36966734,-#_6393a251f7ef04078762632518f885bdp@chr6:36966723..36966734, -
3.07e-86FFCP PHASE2:Mm9::chr9:92087990..92087995,+#_6393a251f7ef04078762632518f885bdp3@Plscr5
3.07e-86FFCP PHASE2:Mm9::chr17:34185389..34185401,+#_6393a251f7ef04078762632518f885bdp8@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr15:97828021..97828028,-#_6393a251f7ef04078762632518f885bdp@chr15:97828021..97828028, -
3.07e-86FFCP PHASE1:Mm9::chr8:94283075..94283082,+#_6393a251f7ef04078762632518f885bdp@chr8:94283075..94283082, +
3.07e-86FFCP PHASE2:Mm9::chr11:94371110..94371111,-#_6393a251f7ef04078762632518f885bdp@chr11:94371110..94371111, -
3.07e-86FFCP PHASE2:Mm9::chr3:127520184..127520191,-#_6393a251f7ef04078762632518f885bdp@chr3:127520184..127520191, -
3.07e-86FFCP PHASE1:Mm9::chr2:12032746..12032751,-#_6393a251f7ef04078762632518f885bdp@chr2:12032746..12032751, -
3.07e-86FFCP PHASE2:Mm9::chr6:83129695..83129696,+#_6393a251f7ef04078762632518f885bdp24@Dctn1
3.07e-86FFCP PHASE2:Mm9::chr17:15466888..15466898,-#_6393a251f7ef04078762632518f885bdp@chr17:15466888..15466898, -
3.07e-86FFCP PHASE2:Mm9::chr2:142907424..142907448,-#_6393a251f7ef04078762632518f885bdp@chr2:142907424..142907448, -
3.07e-86FFCP PHASE1:Mm9::chr6:64684505..64684512,+#_6393a251f7ef04078762632518f885bdp@chr6:64684505..64684512, +
3.07e-86FFCP PHASE1:Mm9::chr17:34185362..34185370,+#_6393a251f7ef04078762632518f885bdp10@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr11:114652018..114652020,+#_6393a251f7ef04078762632518f885bdp@chr11:114652018..114652020, +
3.07e-86FFCP PHASE1:Mm9::chr2:180335744..180335746,+#_6393a251f7ef04078762632518f885bdp@chr2:180335744..180335746, +
3.07e-86FFCP PHASE1:Mm9::chr17:15466888..15466898,-#_6393a251f7ef04078762632518f885bdp@chr17:15466888..15466898, -
3.07e-86FFCP PHASE1:Mm9::chr5:72652671..72652676,+#_6393a251f7ef04078762632518f885bdp@chr5:72652671..72652676, +
3.07e-86FFCP PHASE2:Mm9::chr6:36966993..36966996,-#_6393a251f7ef04078762632518f885bdp@chr6:36966993..36966996, -
3.07e-86FFCP PHASE1:Mm9::chr3:127520184..127520191,-#_6393a251f7ef04078762632518f885bdp@chr3:127520184..127520191, -
3.07e-86FFCP PHASE1:Mm9::chr6:36966723..36966734,-#_6393a251f7ef04078762632518f885bdp@chr6:36966723..36966734, -
3.07e-86FFCP PHASE2:Mm9::chr9:87599703..87599714,-#_6393a251f7ef04078762632518f885bdp@chr9:87599703..87599714, -
3.07e-86FFCP PHASE2:Mm9::chr6:64684505..64684512,+#_6393a251f7ef04078762632518f885bdp@chr6:64684505..64684512, +
3.07e-86FFCP PHASE2:Mm9::chr8:94283075..94283082,+#_6393a251f7ef04078762632518f885bdp@chr8:94283075..94283082, +
3.07e-86FFCP PHASE1:Mm9::chr13:31171742..31171745,-#_6393a251f7ef04078762632518f885bdp@chr13:31171742..31171745, -
3.07e-86FFCP PHASE1:Mm9::chr9:87599703..87599714,-#_6393a251f7ef04078762632518f885bdp@chr9:87599703..87599714, -
3.07e-86FFCP PHASE1:Mm9::chr10:18246142..18246145,+#_6393a251f7ef04078762632518f885bdp@chr10:18246142..18246145, +
3.07e-86FFCP PHASE1:Mm9::chr11:114652018..114652020,+#_6393a251f7ef04078762632518f885bdp@chr11:114652018..114652020, +
3.07e-86FFCP PHASE2:Mm9::chr17:34185343..34185356,+#_6393a251f7ef04078762632518f885bdp7@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr17:34185378..34185383,+#_6393a251f7ef04078762632518f885bdp11@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr15:91379135..91379143,-#_6393a251f7ef04078762632518f885bdp@chr15:91379135..91379143, -
3.07e-86FFCP PHASE2:Mm9::chr19:10535924..10535927,-#_6393a251f7ef04078762632518f885bdp@chr19:10535924..10535927, -
3.07e-86FFCP PHASE1:Mm9::chr2:142906965..142906982,-#_6393a251f7ef04078762632518f885bdp@chr2:142906965..142906982, -
3.07e-86FFCP PHASE1:Mm9::chr2:53464193..53464197,+#_6393a251f7ef04078762632518f885bdp@chr2:53464193..53464197, +
3.07e-86FFCP PHASE2:Mm9::chr2:53464193..53464197,+#_6393a251f7ef04078762632518f885bdp@chr2:53464193..53464197, +
3.07e-86FFCP PHASE1:Mm9::chr6:36966993..36966996,-#_6393a251f7ef04078762632518f885bdp@chr6:36966993..36966996, -
3.07e-86FFCP PHASE2:Mm9::chr18:66033513..66033517,-#_6393a251f7ef04078762632518f885bdp@chr18:66033513..66033517, -
3.07e-86FFCP PHASE2:Mm9::chr4:106770202..106770208,+#_6393a251f7ef04078762632518f885bdp@chr4:106770202..106770208, +
3.07e-86FFCP PHASE2:Mm9::chr6:64684637..64684654,+#_6393a251f7ef04078762632518f885bdp@chr6:64684637..64684654, +
3.07e-86FFCP PHASE1:Mm9::chr6:64684637..64684654,+#_6393a251f7ef04078762632518f885bdp@chr6:64684637..64684654, +
3.07e-86FFCP PHASE2:Mm9::chr2:12032746..12032751,-#_6393a251f7ef04078762632518f885bdp@chr2:12032746..12032751, -
3.07e-86FFCP PHASE1:Mm9::chr18:66033513..66033517,-#_6393a251f7ef04078762632518f885bdp@chr18:66033513..66033517, -
3.07e-86FFCP PHASE2:Mm9::chr17:34185362..34185370,+#_6393a251f7ef04078762632518f885bdp10@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr17:34185389..34185401,+#_6393a251f7ef04078762632518f885bdp8@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr2:142907424..142907448,-#_6393a251f7ef04078762632518f885bdp@chr2:142907424..142907448, -
3.07e-86FFCP PHASE1:Mm9::chr15:91379135..91379143,-#_6393a251f7ef04078762632518f885bdp@chr15:91379135..91379143, -
3.07e-86FFCP PHASE2:Mm9::chr16:55283394..55283400,-#_6393a251f7ef04078762632518f885bdp1@Zpld1
3.07e-86FFCP PHASE2:Mm9::chr13:31171742..31171745,-#_6393a251f7ef04078762632518f885bdp@chr13:31171742..31171745, -
3.07e-86FFCP PHASE2:Mm9::chr15:97828021..97828028,-#_6393a251f7ef04078762632518f885bdp@chr15:97828021..97828028, -
3.07e-86FFCP PHASE2:Mm9::chr6:64684692..64684697,+#_6393a251f7ef04078762632518f885bdp@chr6:64684692..64684697, +
3.07e-86FFCP PHASE1:Mm9::chr6:64684692..64684697,+#_6393a251f7ef04078762632518f885bdp@chr6:64684692..64684697, +
3.07e-86FFCP PHASE2:Mm9::chr2:180335744..180335746,+#_6393a251f7ef04078762632518f885bdp@chr2:180335744..180335746, +
3.07e-86FFCP PHASE1:Mm9::chr16:55283394..55283400,-#_6393a251f7ef04078762632518f885bdp1@Zpld1
3.07e-86FFCP PHASE2:Mm9::chr10:18246142..18246145,+#_6393a251f7ef04078762632518f885bdp@chr10:18246142..18246145, +
3.07e-86FFCP PHASE2:Mm9::chr17:34185378..34185383,+#_6393a251f7ef04078762632518f885bdp11@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr5:72652671..72652676,+#_6393a251f7ef04078762632518f885bdp@chr5:72652671..72652676, +
3.07e-86FFCP PHASE1:Mm9::chr4:106770202..106770208,+#_6393a251f7ef04078762632518f885bdp@chr4:106770202..106770208, +
3.07e-86FFCP PHASE1:Mm9::chr11:94371110..94371111,-#_6393a251f7ef04078762632518f885bdp@chr11:94371110..94371111, -
3.07e-86FFCP PHASE1:Mm9::chr19:10535924..10535927,-#_6393a251f7ef04078762632518f885bdp@chr19:10535924..10535927, -
3.07e-86FFCP PHASE2:Mm9::chr2:142906965..142906982,-#_6393a251f7ef04078762632518f885bdp@chr2:142906965..142906982, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185343..34185356,+#_6393a251f7ef04078762632518f885bdp7@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr6:83129695..83129696,+#_6393a251f7ef04078762632518f885bdp24@Dctn1
3.07e-86FFCP PHASE1:Mm9::chr9:92087990..92087995,+#_6393a251f7ef04078762632518f885bdp3@Plscr5
2.74e-44FFCP PHASE1:Mm9::chr3:154459246..154459253,+#_ca819317444dcb86559790a95de50e7bp@chr3:154459246..154459253, +
2.74e-44FFCP PHASE2:Mm9::chr9:56208792..56208814,-#_ca819317444dcb86559790a95de50e7bp@chr9:56208792..56208814, -
2.74e-44FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_ca819317444dcb86559790a95de50e7bp@chr14:47293487..47293493, -
2.74e-44FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_ca819317444dcb86559790a95de50e7bp3@Fanca
2.74e-44FFCP PHASE1:Mm9::chr2:53464168..53464175,+#_ca819317444dcb86559790a95de50e7bp@chr2:53464168..53464175, +
2.74e-44FFCP PHASE2:Mm9::chr1:93235253..93235264,+#_ca819317444dcb86559790a95de50e7bp@chr1:93235253..93235264, +
2.74e-44FFCP PHASE2:Mm9::chr5:3909290..3909299,+#_ca819317444dcb86559790a95de50e7bp@chr5:3909290..3909299, +
2.74e-44FFCP PHASE1:Mm9::chr7:88068153..88068160,-#_ca819317444dcb86559790a95de50e7bp10@Sec11a
2.74e-44FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_ca819317444dcb86559790a95de50e7bp@chr5:28035962..28035983, +
2.74e-44FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_ca819317444dcb86559790a95de50e7bp@chr2:53464168..53464175, +
2.74e-44FFCP PHASE2:Mm9::chr2:29935952..29935993,+#_ca819317444dcb86559790a95de50e7bp7@Pkn3
2.74e-44FFCP PHASE2:Mm9::chr4:115556939..115556945,+#_ca819317444dcb86559790a95de50e7bp4@Kncn
2.74e-44FFCP PHASE1:Mm9::chr14:20649897..20649907,+#_ca819317444dcb86559790a95de50e7bp@chr14:20649897..20649907, +
2.74e-44FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_ca819317444dcb86559790a95de50e7bp@chr3:100724698..100724706, +
2.74e-44FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_ca819317444dcb86559790a95de50e7bp@chr2:170417150..170417155, -
2.74e-44FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_ca819317444dcb86559790a95de50e7bp9@Otof
2.74e-44FFCP PHASE1:Mm9::chr4:115556939..115556945,+#_ca819317444dcb86559790a95de50e7bp4@Kncn
2.74e-44FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_ca819317444dcb86559790a95de50e7bp@chr15:89215306..89215315, +
2.74e-44FFCP PHASE1:Mm9::chr11:94371127..94371139,-#_ca819317444dcb86559790a95de50e7bp@chr11:94371127..94371139, -
2.74e-44FFCP PHASE2:Mm9::chr8:13414289..13414295,+#_ca819317444dcb86559790a95de50e7bp@chr8:13414289..13414295, +
2.74e-44FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_ca819317444dcb86559790a95de50e7bp@chr12:13508015..13508019, +
2.74e-44FFCP PHASE1:Mm9::chr17:31335869..31335899,-#_ca819317444dcb86559790a95de50e7bp1@Tmprss3
2.74e-44FFCP PHASE2:Mm9::chr3:154459184..154459195,+#_ca819317444dcb86559790a95de50e7bp@chr3:154459184..154459195, +
2.74e-44FFCP PHASE1:Mm9::chr6:113251614..113251623,+#_ca819317444dcb86559790a95de50e7bp@chr6:113251614..113251623, +
2.74e-44FFCP PHASE1:Mm9::chr18:38104702..38104718,-#_ca819317444dcb86559790a95de50e7bp@chr18:38104702..38104718, -
2.74e-44FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_ca819317444dcb86559790a95de50e7bp@chr4:63079735..63079745, -
2.74e-44FFCP PHASE2:Mm9::chr1:182528388..182528403,+#_ca819317444dcb86559790a95de50e7bp@chr1:182528388..182528403, +
2.74e-44FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_ca819317444dcb86559790a95de50e7bp@chr2:152453066..152453075, -
2.74e-44FFCP PHASE1:Mm9::chr17:13983095..13983100,+#_ca819317444dcb86559790a95de50e7bp@chr17:13983095..13983100, +
2.74e-44FFCP PHASE2:Mm9::chr19:4140290..4140321,+#_ca819317444dcb86559790a95de50e7bp2@Gpr152
2.74e-44FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_ca819317444dcb86559790a95de50e7bp3@Gipc3
2.74e-44FFCP PHASE1:Mm9::chr5:3909290..3909299,+#_ca819317444dcb86559790a95de50e7bp@chr5:3909290..3909299, +
2.74e-44FFCP PHASE1:Mm9::chr13:78257518..78257522,+#_ca819317444dcb86559790a95de50e7bp@chr13:78257518..78257522, +
2.74e-44FFCP PHASE1:Mm9::chr1:93235253..93235264,+#_ca819317444dcb86559790a95de50e7bp@chr1:93235253..93235264, +
2.74e-44FFCP PHASE2:Mm9::chr3:58626291..58626298,-#_ca819317444dcb86559790a95de50e7bp@chr3:58626291..58626298, -
2.74e-44FFCP PHASE1:Mm9::chr19:10536767..10536777,-#_ca819317444dcb86559790a95de50e7bp@chr19:10536767..10536777, -
2.74e-44FFCP PHASE1:Mm9::chr14:63099970..63099980,-#_ca819317444dcb86559790a95de50e7bp@chr14:63099970..63099980, -
2.74e-44FFCP PHASE2:Mm9::chrX:154140800..154140810,+#_ca819317444dcb86559790a95de50e7bp@chrX:154140800..154140810, +

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