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{{CL
{{CL
|id=CL:0000362
|alt_id=CL:1000396
|name=epidermal cell
|namespace=cell
|def="An epithelial cell of the integument (the outer layer of an organism)." [Flybase:dsj, MA:ma]
|xref=BTO:0001470;;FMA:62411
|is_a=CL:0000076;;CL:0002159
|synonym="cell of epidermis" EXACT [FMA:62411];;"epithelial cell of skin" NARROW [FMA:62411]
|comment=
|comment=
|alt_id=CL:1000396
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="An epithelial cell of the integument (the outer layer of an organism)." [Flybase:dsj, MA:ma]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000362
|is_a=CL:0002159
|is_obsolete=
|located_in=
|located_in=
|part_of=UBERON:0001003
|name=epidermal cell
|namespace=cell
|obo_creation_date=
|part_of=UBERON:0007376
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="cell of epidermis" EXACT [FMA:62411];;"epithelial cell of skin" NARROW [FMA:62411]
|union_of=
|xref=BTO:0001470;;FMA:62411
}}
}}

Revision as of 10:17, 12 September 2014

Name:epidermal cell
Namespace:cell
Definition:"An epithelial cell of the integument (the outer layer of an organism)." [Flybase:dsj, MA:ma]
Xrefs:
links:

BTO:0001470

FMA:62411
Synonyms: "cell of epidermis" EXACT [FMA:62411]
"epithelial cell of skin" NARROW [FMA:62411]
Alt_id: CL:1000396


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0002159(general ecto-epithelial cell)
part_of:UBERON:0007376(outer epithelium)



Children


is a:CL:0000312 (keratinocyte),CL:0002560 (inner root sheath cell),CL:0002561 (outer root sheath cell),CL:0002562 (hair germinal matrix cell),CL:1000448 (epithelial cell of sweat gland)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000362 (epidermal cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
6.42e-59FFCP PHASE2:Hg19::chr1:16090914..16090925,+#_7df4f2f1e28b892b0631d5d97c4dd0d1p22@FBLIM1
6.42e-59FFCP PHASE1:Hg19::chr1:16090914..16090925,+#_7df4f2f1e28b892b0631d5d97c4dd0d1p22@FBLIM1
7.82e-50FFCP PHASE2:Hg19::chr4:87768946..87768955,-#_08f4b0d25d011e221a1b989f0562a6c7p@chr4:87768946..87768955, -
7.82e-50FFCP PHASE1:Hg19::chr4:87768946..87768955,-#_08f4b0d25d011e221a1b989f0562a6c7p@chr4:87768946..87768955, -
9.25e-50FFCP PHASE1:Hg19::chrY:7671916..7671924,-#_eac0318e31ef49565c8b8cb1617a192ap@chrY:7671916..7671924, -
9.25e-50FFCP PHASE2:Hg19::chrY:7671916..7671924,-#_eac0318e31ef49565c8b8cb1617a192ap@chrY:7671916..7671924, -
9.75e-45FFCP PHASE2:Hg19::chr5:64369097..64369105,+#_c2dd08385246e4798bee9088fd694922p@chr5:64369097..64369105, +
9.75e-45FFCP PHASE1:Hg19::chr1:201288895..201288902,+#_c2dd08385246e4798bee9088fd694922p@chr1:201288895..201288902, +
9.75e-45FFCP PHASE2:Hg19::chr9:139089234..139089236,-#_c2dd08385246e4798bee9088fd694922p@chr9:139089234..139089236, -
9.75e-45FFCP PHASE1:Hg19::chr1:40770344..40770353,-#_c2dd08385246e4798bee9088fd694922p29@COL9A2
9.75e-45FFCP PHASE2:Hg19::chr15:46610897..46610904,+#_c2dd08385246e4798bee9088fd694922p@chr15:46610897..46610904, +
9.75e-45FFCP PHASE1:Hg19::chr15:46610847..46610851,+#_c2dd08385246e4798bee9088fd694922p@chr15:46610847..46610851, +
9.75e-45FFCP PHASE2:Hg19::chr9:33719626..33719633,-#_c2dd08385246e4798bee9088fd694922p@chr9:33719626..33719633, -
9.75e-45FFCP PHASE1:Hg19::chr1:216196797..216196801,-#_c2dd08385246e4798bee9088fd694922p@chr1:216196797..216196801, -
9.75e-45FFCP PHASE1:Hg19::chr4:6356121..6356152,-#_c2dd08385246e4798bee9088fd694922p@chr4:6356121..6356152, -
9.75e-45FFCP PHASE1:Hg19::chr19:39401676..39401683,-#_c2dd08385246e4798bee9088fd694922p@chr19:39401676..39401683, -
9.75e-45FFCP PHASE2:Hg19::chr15:46610951..46610964,+#_c2dd08385246e4798bee9088fd694922p@chr15:46610951..46610964, +
9.75e-45FFCP PHASE1:Hg19::chr20:49727833..49727839,-#_c2dd08385246e4798bee9088fd694922p@chr20:49727833..49727839, -
9.75e-45FFCP PHASE1:Hg19::chr3:66452082..66452087,-#_c2dd08385246e4798bee9088fd694922p@chr3:66452082..66452087, -
9.75e-45FFCP PHASE2:Hg19::chr1:216595350..216595395,-#_c2dd08385246e4798bee9088fd694922p@chr1:216595350..216595395, -
9.75e-45FFCP PHASE1:Hg19::chr6:112466463..112466468,+#_c2dd08385246e4798bee9088fd694922p@chr6:112466463..112466468, +
9.75e-45FFCP PHASE1:Hg19::chr15:46610897..46610904,+#_c2dd08385246e4798bee9088fd694922p@chr15:46610897..46610904, +
9.75e-45FFCP PHASE1:Hg19::chr9:139089234..139089236,-#_c2dd08385246e4798bee9088fd694922p@chr9:139089234..139089236, -
9.75e-45FFCP PHASE2:Hg19::chr1:242843433..242843446,-#_c2dd08385246e4798bee9088fd694922p@chr1:242843433..242843446, -
9.75e-45FFCP PHASE2:Hg19::chr1:201288895..201288902,+#_c2dd08385246e4798bee9088fd694922p@chr1:201288895..201288902, +
9.75e-45FFCP PHASE1:Hg19::chr22:27043104..27043111,+#_c2dd08385246e4798bee9088fd694922p27@MIAT
9.75e-45FFCP PHASE1:Hg19::chr11:79659013..79659021,-#_c2dd08385246e4798bee9088fd694922p@chr11:79659013..79659021, -
9.75e-45FFCP PHASE2:Hg19::chr1:216196797..216196801,-#_c2dd08385246e4798bee9088fd694922p@chr1:216196797..216196801, -
9.75e-45FFCP PHASE2:Hg19::chr11:79659013..79659021,-#_c2dd08385246e4798bee9088fd694922p@chr11:79659013..79659021, -
9.75e-45FFCP PHASE1:Hg19::chr5:64369097..64369105,+#_c2dd08385246e4798bee9088fd694922p@chr5:64369097..64369105, +
9.75e-45FFCP PHASE1:Hg19::chr15:46610951..46610964,+#_c2dd08385246e4798bee9088fd694922p@chr15:46610951..46610964, +
9.75e-45FFCP PHASE2:Hg19::chr1:40770344..40770353,-#_c2dd08385246e4798bee9088fd694922p29@COL9A2
9.75e-45FFCP PHASE1:Hg19::chr9:33719626..33719633,-#_c2dd08385246e4798bee9088fd694922p@chr9:33719626..33719633, -
9.75e-45FFCP PHASE2:Hg19::chr3:66452082..66452087,-#_c2dd08385246e4798bee9088fd694922p@chr3:66452082..66452087, -
9.75e-45FFCP PHASE1:Hg19::chr11:79659052..79659060,-#_c2dd08385246e4798bee9088fd694922p@chr11:79659052..79659060, -
9.75e-45FFCP PHASE2:Hg19::chr6:112466463..112466468,+#_c2dd08385246e4798bee9088fd694922p@chr6:112466463..112466468, +
9.75e-45FFCP PHASE2:Hg19::chr4:6356121..6356152,-#_c2dd08385246e4798bee9088fd694922p@chr4:6356121..6356152, -
9.75e-45FFCP PHASE2:Hg19::chr11:79659052..79659060,-#_c2dd08385246e4798bee9088fd694922p@chr11:79659052..79659060, -
9.75e-45FFCP PHASE2:Hg19::chr19:39401676..39401683,-#_c2dd08385246e4798bee9088fd694922p@chr19:39401676..39401683, -
9.75e-45FFCP PHASE1:Hg19::chr1:216595350..216595395,-#_c2dd08385246e4798bee9088fd694922p@chr1:216595350..216595395, -
9.75e-45FFCP PHASE2:Hg19::chr20:49727833..49727839,-#_c2dd08385246e4798bee9088fd694922p@chr20:49727833..49727839, -
9.75e-45FFCP PHASE2:Hg19::chr15:46610847..46610851,+#_c2dd08385246e4798bee9088fd694922p@chr15:46610847..46610851, +
9.75e-45FFCP PHASE2:Hg19::chr22:27043104..27043111,+#_c2dd08385246e4798bee9088fd694922p27@MIAT
9.75e-45FFCP PHASE1:Hg19::chr1:242843433..242843446,-#_c2dd08385246e4798bee9088fd694922p@chr1:242843433..242843446, -
4.93e-43FFCP PHASE2:Hg19::chr17:38120375..38120394,+#_c0e126aa6e7f37c48fbaf2ebe3268ad5p@chr17:38120375..38120394, +
4.93e-43FFCP PHASE1:Hg19::chr17:38120375..38120394,+#_c0e126aa6e7f37c48fbaf2ebe3268ad5p@chr17:38120375..38120394, +
3.32e-40FFCP PHASE2:Hg19::chr17:19702846..19702866,-#_781fa362c02c129d243174c97f9c22dfp@chr17:19702846..19702866, -
3.32e-40FFCP PHASE1:Hg19::chr17:19702846..19702866,-#_781fa362c02c129d243174c97f9c22dfp@chr17:19702846..19702866, -
6.49e-40FFCP PHASE2:Hg19::chr1:207038965..207038969,+#_8f0ff3b774a6633157857a1f4952edfcp1@IL20
6.49e-40FFCP PHASE1:Hg19::chr1:207038965..207038969,+#_8f0ff3b774a6633157857a1f4952edfcp1@IL20
3.83e-39FFCP PHASE1:Hg19::chr11:93754316..93754353,+#_bf0063333db47c6da6f15d270fa811f2p2@HEPHL1
3.83e-39FFCP PHASE2:Hg19::chr11:93754316..93754353,+#_bf0063333db47c6da6f15d270fa811f2p2@HEPHL1
3.69e-37FFCP PHASE1:Hg19::chr4:87770290..87770304,-#_42e88ad9af57a12de1efb51530485976p2@SLC10A6
3.69e-37FFCP PHASE2:Hg19::chr4:87770290..87770304,-#_42e88ad9af57a12de1efb51530485976p2@SLC10A6
2.3e-34FFCP PHASE1:Hg19::chr17:48611940..48611947,+#_dab9956a6c85a73618ac86097c3e21f5p5@EPN3
2.3e-34FFCP PHASE2:Hg19::chr17:48611940..48611947,+#_dab9956a6c85a73618ac86097c3e21f5p5@EPN3
3.34e-32FFCP PHASE2:Hg19::chr1:152783824..152783828,+#_6a8afaa9781d8d6d14430a7f39eb5879p@chr1:152783824..152783828, +
3.34e-32FFCP PHASE1:Hg19::chr1:152783824..152783828,+#_6a8afaa9781d8d6d14430a7f39eb5879p@chr1:152783824..152783828, +
3.93e-32FFCP PHASE2:Hg19::chr1:152815327..152815336,+#_b39a6bc98dc057214198db159a19661cp1@LCE6A
3.93e-32FFCP PHASE1:Hg19::chr1:152815327..152815336,+#_b39a6bc98dc057214198db159a19661cp1@LCE6A
6.9e-32FFCP PHASE2:Hg19::chr13:30259768..30259777,+#_b39efeea4dcf165db38b67b94bd6fdd3p@chr13:30259768..30259777, +
6.9e-32FFCP PHASE1:Hg19::chr13:30259768..30259777,+#_b39efeea4dcf165db38b67b94bd6fdd3p@chr13:30259768..30259777, +
6.12e-31FFCP PHASE2:Hg19::chr1:2359091..2359102,+#_4c9e50016b4055cbcd7e74838f9f1b39p@chr1:2359091..2359102, +
6.12e-31FFCP PHASE1:Hg19::chr1:2359091..2359102,+#_4c9e50016b4055cbcd7e74838f9f1b39p@chr1:2359091..2359102, +
9.44e-31FFCP PHASE2:Hg19::chr1:152798501..152798507,+#_0351d9ee4d5d3111c7c2a96248648a33p1@LCE1A
9.44e-31FFCP PHASE1:Hg19::chr1:152798501..152798507,+#_0351d9ee4d5d3111c7c2a96248648a33p1@LCE1A
1.65e-30FFCP PHASE2:Hg19::chr12:52844247..52844256,-#_cdeee7215a0f4468c8c304109ef1628cp@chr12:52844247..52844256, -
1.65e-30FFCP PHASE1:Hg19::chr12:52844247..52844256,-#_cdeee7215a0f4468c8c304109ef1628cp@chr12:52844247..52844256, -
1.68e-30FFCP PHASE1:Hg19::chr7:40855279..40855286,+#_414d9f28fa3f5ce0a8aec730c9313a12p@chr7:40855279..40855286, +
1.68e-30FFCP PHASE2:Hg19::chr7:40855279..40855286,+#_414d9f28fa3f5ce0a8aec730c9313a12p@chr7:40855279..40855286, +
2.66e-30FFCP PHASE2:Hg19::chr12:65175253..65175283,-#_89ef5a4bad6670dbc892bde43229bd3bp@chr12:65175253..65175283, -
2.66e-30FFCP PHASE2:Hg19::chr5:64400723..64400730,-#_89ef5a4bad6670dbc892bde43229bd3bp@chr5:64400723..64400730, -
2.66e-30FFCP PHASE2:Hg19::chr1:155048171..155048179,+#_89ef5a4bad6670dbc892bde43229bd3bp@chr1:155048171..155048179, +
2.66e-30FFCP PHASE1:Hg19::chr9:139096224..139096231,-#_89ef5a4bad6670dbc892bde43229bd3bp@chr9:139096224..139096231, -
2.66e-30FFCP PHASE2:Hg19::chr5:145722450..145722456,+#_89ef5a4bad6670dbc892bde43229bd3bp@chr5:145722450..145722456, +
2.66e-30FFCP PHASE2:Hg19::chr22:35921483..35921490,-#_89ef5a4bad6670dbc892bde43229bd3bp@chr22:35921483..35921490, -
2.66e-30FFCP PHASE2:Hg19::chr16:53653257..53653264,-#_89ef5a4bad6670dbc892bde43229bd3bp@chr16:53653257..53653264, -
2.66e-30FFCP PHASE1:Hg19::chr12:65175253..65175283,-#_89ef5a4bad6670dbc892bde43229bd3bp@chr12:65175253..65175283, -
2.66e-30FFCP PHASE1:Hg19::chr11:128634589..128634606,+#_89ef5a4bad6670dbc892bde43229bd3bp14@FLI1
2.66e-30FFCP PHASE1:Hg19::chr16:53653257..53653264,-#_89ef5a4bad6670dbc892bde43229bd3bp@chr16:53653257..53653264, -
2.66e-30FFCP PHASE1:Hg19::chr5:64369069..64369083,+#_89ef5a4bad6670dbc892bde43229bd3bp@chr5:64369069..64369083, +
2.66e-30FFCP PHASE2:Hg19::chr1:155048200..155048207,+#_89ef5a4bad6670dbc892bde43229bd3bp@chr1:155048200..155048207, +
2.66e-30FFCP PHASE2:Hg19::chr9:33719660..33719671,-#_89ef5a4bad6670dbc892bde43229bd3bp@chr9:33719660..33719671, -
2.66e-30FFCP PHASE1:Hg19::chr1:155048171..155048179,+#_89ef5a4bad6670dbc892bde43229bd3bp@chr1:155048171..155048179, +
2.66e-30FFCP PHASE1:Hg19::chr5:145722450..145722456,+#_89ef5a4bad6670dbc892bde43229bd3bp@chr5:145722450..145722456, +
2.66e-30FFCP PHASE2:Hg19::chr9:139096224..139096231,-#_89ef5a4bad6670dbc892bde43229bd3bp@chr9:139096224..139096231, -
2.66e-30FFCP PHASE2:Hg19::chr5:64369069..64369083,+#_89ef5a4bad6670dbc892bde43229bd3bp@chr5:64369069..64369083, +
2.66e-30FFCP PHASE1:Hg19::chr5:64400723..64400730,-#_89ef5a4bad6670dbc892bde43229bd3bp@chr5:64400723..64400730, -
2.66e-30FFCP PHASE2:Hg19::chr11:128634589..128634606,+#_89ef5a4bad6670dbc892bde43229bd3bp14@FLI1
2.66e-30FFCP PHASE1:Hg19::chr22:35921483..35921490,-#_89ef5a4bad6670dbc892bde43229bd3bp@chr22:35921483..35921490, -
2.66e-30FFCP PHASE1:Hg19::chr9:33719660..33719671,-#_89ef5a4bad6670dbc892bde43229bd3bp@chr9:33719660..33719671, -
2.66e-30FFCP PHASE1:Hg19::chr1:155048200..155048207,+#_89ef5a4bad6670dbc892bde43229bd3bp@chr1:155048200..155048207, +
3.09e-30FFCP PHASE1:Hg19::chr11:31312513..31312524,-#_01c44cab1e4be4d784692350c5334cabp@chr11:31312513..31312524, -
3.09e-30FFCP PHASE2:Hg19::chr20:49727891..49727898,-#_01c44cab1e4be4d784692350c5334cabp@chr20:49727891..49727898, -
3.09e-30FFCP PHASE2:Hg19::chr2:3152671..3152679,-#_01c44cab1e4be4d784692350c5334cabp@chr2:3152671..3152679, -
3.09e-30FFCP PHASE1:Hg19::chr5:145724642..145724652,+#_01c44cab1e4be4d784692350c5334cabp@chr5:145724642..145724652, +
3.09e-30FFCP PHASE2:Hg19::chr18:13165683..13165695,-#_01c44cab1e4be4d784692350c5334cabp@chr18:13165683..13165695, -
3.09e-30FFCP PHASE2:Hg19::chr5:14742023..14742037,-#_01c44cab1e4be4d784692350c5334cabp@chr5:14742023..14742037, -
3.09e-30FFCP PHASE1:Hg19::chr20:31116333..31116338,-#_01c44cab1e4be4d784692350c5334cabp@chr20:31116333..31116338, -
3.09e-30FFCP PHASE1:Hg19::chr1:216286476..216286479,-#_01c44cab1e4be4d784692350c5334cabp@chr1:216286476..216286479, -

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