CL:0000154: Difference between revisions
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{{CL | {{CL | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=CL:0000154 | |||
|is_a=CL:0000151 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=protein secreting cell | |||
|namespace=cell | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
| | |subset= | ||
| | |synonym= | ||
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}} | }} | ||
Revision as of 10:14, 12 September 2014
| Name: | protein secreting cell |
|---|---|
| Namespace: | cell |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000151(secretory cell) |
|---|
Children
| is a: | CL:0000323 (lysozyme secreting cell),CL:0000511 (androgen binding protein secreting cell),CL:0000622 (acinar cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11220-116B5 (Sebocyte, donor1)
- 11255-116F4 (Sertoli Cells, donor1)
- 11301-117B5 (Sebocyte, donor2)
- 11333-117F1 (Sertoli Cells, donor2)
- 11378-118B1 (Sebocyte, donor3)
- 11771-123I7 (salivary acinar cells, donor1)
- 11772-123I8 (salivary acinar cells, donor2)
- 11773-123I9 (salivary acinar cells, donor3)
Mouse (Mus musculus)
- 11220-116B5 (Sebocyte, donor1)
- 11255-116F4 (Sertoli Cells, donor1)
- 11301-117B5 (Sebocyte, donor2)
- 11333-117F1 (Sertoli Cells, donor2)
- 11378-118B1 (Sebocyte, donor3)
- 11771-123I7 (salivary acinar cells, donor1)
- 11772-123I8 (salivary acinar cells, donor2)
- 11773-123I9 (salivary acinar cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000154 (protein secreting cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.83e-98 | FFCP PHASE2:Hg19::chr5:66942627..66942643,-#_de69d508e5834c73ea4bbffe6519dd2f | p1@ENST00000507298 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr6:25004699..25004706,-#_de69d508e5834c73ea4bbffe6519dd2f | p@chr6:25004699..25004706, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr5:66942627..66942643,-#_de69d508e5834c73ea4bbffe6519dd2f | p1@ENST00000507298 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr6:25004699..25004706,-#_de69d508e5834c73ea4bbffe6519dd2f | p@chr6:25004699..25004706, - |
| 2.58e-74 | FFCP PHASE2:Hg19::chr6:25004760..25004769,-#_514b729549be3750e3bca70e832777d8 | p@chr6:25004760..25004769, - |
| 2.58e-74 | FFCP PHASE1:Hg19::chr6:25004888..25004899,-#_514b729549be3750e3bca70e832777d8 | p@chr6:25004888..25004899, - |
| 2.58e-74 | FFCP PHASE2:Hg19::chr6:25004888..25004899,-#_514b729549be3750e3bca70e832777d8 | p@chr6:25004888..25004899, - |
| 2.58e-74 | FFCP PHASE1:Hg19::chr6:25004760..25004769,-#_514b729549be3750e3bca70e832777d8 | p@chr6:25004760..25004769, - |
| 5.47e-74 | FFCP PHASE1:Hg19::chr12:966094..966103,+#_ebf4c9d0bb71442f38b5730970bf513e | p@chr12:966094..966103, + |
| 5.47e-74 | FFCP PHASE2:Hg19::chr12:966094..966103,+#_ebf4c9d0bb71442f38b5730970bf513e | p@chr12:966094..966103, + |
| 2.83e-66 | FFCP PHASE1:Hg19::chr3:48471830..48471839,-#_b621ac7f521cca5101a28d06ee8a1797 | p27@PLXNB1 |
| 2.83e-66 | FFCP PHASE2:Hg19::chr3:48471830..48471839,-#_b621ac7f521cca5101a28d06ee8a1797 | p27@PLXNB1 |
| 8.15e-60 | FFCP PHASE1:Hg19::chr6:25004791..25004799,-#_732adcbab06e82bb36d7695cd574f57f | p@chr6:25004791..25004799, - |
| 8.15e-60 | FFCP PHASE2:Hg19::chr6:25004791..25004799,-#_732adcbab06e82bb36d7695cd574f57f | p@chr6:25004791..25004799, - |
| 1.17e-58 | FFCP PHASE2:Hg19::chr15:95334390..95334402,-#_e88fdfbd5bbb7639adcd041fd16d84c9 | p@chr15:95334390..95334402, - |
| 1.17e-58 | FFCP PHASE1:Hg19::chr15:95334390..95334402,-#_e88fdfbd5bbb7639adcd041fd16d84c9 | p@chr15:95334390..95334402, - |
| 1.82e-58 | FFCP PHASE1:Hg19::chr10:47740297..47740299,+#_a3d5360dd10bad0307b4f842447d85aa | p1@FAM25HP |
| 1.82e-58 | FFCP PHASE2:Hg19::chr10:47740297..47740299,+#_a3d5360dd10bad0307b4f842447d85aa | p1@FAM25HP |
| 6.05e-53 | FFCP PHASE2:Hg19::chr17:38978586..38978620,-#_d2c475b1971e8f1aee91556b94aa6ff0 | p5@KRT10 |
| 6.05e-53 | FFCP PHASE1:Hg19::chr17:38978586..38978620,-#_d2c475b1971e8f1aee91556b94aa6ff0 | p5@KRT10 |
| 3.84e-50 | FFCP PHASE1:Hg19::chr6:25004678..25004688,-#_f914f86820c9399ee7febb45f6f488c5 | p@chr6:25004678..25004688, - |
| 3.84e-50 | FFCP PHASE2:Hg19::chr6:25004678..25004688,-#_f914f86820c9399ee7febb45f6f488c5 | p@chr6:25004678..25004688, - |
| 6.35e-50 | FFCP PHASE1:Hg19::chr12:52912957..52912973,-#_488fbfab45e87d8e2fa1e476294fbbfd | p17@KRT5 |
| 6.35e-50 | FFCP PHASE2:Hg19::chr12:52912957..52912973,-#_488fbfab45e87d8e2fa1e476294fbbfd | p17@KRT5 |
| 2.88e-48 | FFCP PHASE1:Hg19::chr17:38978257..38978272,-#_7aaade785ea05ed943cebfa67e6ec04c | p6@KRT10 |
| 2.88e-48 | FFCP PHASE2:Hg19::chr17:38978257..38978272,-#_7aaade785ea05ed943cebfa67e6ec04c | p6@KRT10 |
| 3.67e-48 | FFCP PHASE1:Hg19::chr17:38976838..38976861,-#_b5b9a8c2e3a07b195c9b4a7eefcf802c | p@chr17:38976838..38976861, - |
| 3.67e-48 | FFCP PHASE2:Hg19::chr17:38976838..38976861,-#_b5b9a8c2e3a07b195c9b4a7eefcf802c | p@chr17:38976838..38976861, - |
| 9.76e-45 | FFCP PHASE1:Hg19::chr7:7604061..7604072,-#_c6fdc3ccb13414da2fe82209120bad31 | p@chr7:7604061..7604072, - |
| 9.76e-45 | FFCP PHASE2:Hg19::chr7:7604061..7604072,-#_c6fdc3ccb13414da2fe82209120bad31 | p@chr7:7604061..7604072, - |
| 2.55e-44 | FFCP PHASE1:Hg19::chr10:105830210..105830215,-#_d6255bc3a58260a2d168f4d28135f932 | p@chr10:105830210..105830215, - |
| 2.55e-44 | FFCP PHASE2:Hg19::chr10:105830210..105830215,-#_d6255bc3a58260a2d168f4d28135f932 | p@chr10:105830210..105830215, - |
| 3.65e-43 | FFCP PHASE1:Hg19::chr6:56488575..56488587,-#_86ac03ec8611c8743ea1eda0f3518424 | p@chr6:56488575..56488587, - |
| 3.65e-43 | FFCP PHASE2:Hg19::chr6:56488575..56488587,-#_86ac03ec8611c8743ea1eda0f3518424 | p@chr6:56488575..56488587, - |
| 3.65e-43 | FFCP PHASE2:Hg19::chr20:3295706..3295717,-#_86ac03ec8611c8743ea1eda0f3518424 | p@chr20:3295706..3295717, - |
| 3.65e-43 | FFCP PHASE1:Hg19::chr20:3295706..3295717,-#_86ac03ec8611c8743ea1eda0f3518424 | p@chr20:3295706..3295717, - |
| 4.86e-43 | FFCP PHASE1:Hg19::chr17:38978519..38978529,-#_2f3a549618f4b1b5b46969dc26aae4a2 | p9@KRT10 |
| 4.86e-43 | FFCP PHASE2:Hg19::chr17:38978519..38978529,-#_2f3a549618f4b1b5b46969dc26aae4a2 | p9@KRT10 |
| 6.48e-43 | FFCP PHASE1:Hg19::chr17:38978422..38978432,-#_da73f2f13b555052ecd34684f70c9956 | p12@KRT10 |
| 6.48e-43 | FFCP PHASE2:Hg19::chr17:38978422..38978432,-#_da73f2f13b555052ecd34684f70c9956 | p12@KRT10 |
| 1.95e-37 | FFCP PHASE2:Hg19::chr2:19428508..19428522,-#_9539f33652d3b4de39b71a4be00415f3 | p@chr2:19428508..19428522, - |
| 1.95e-37 | FFCP PHASE1:Hg19::chr2:19428508..19428522,-#_9539f33652d3b4de39b71a4be00415f3 | p@chr2:19428508..19428522, - |
| 2.37e-36 | FFCP PHASE1:Hg19::chr10:118187381..118187397,+#_2e9290c87bf7b93ee418d268622ecd06 | p3@PNLIPRP3 |
| 2.37e-36 | FFCP PHASE2:Hg19::chr10:118187381..118187397,+#_2e9290c87bf7b93ee418d268622ecd06 | p3@PNLIPRP3 |
| 9.61e-36 | FFCP PHASE1:Hg19::chr1:153044083..153044088,-#_e903e9926d62813faf9e3b740e04c7d5 | p1@SPRR2B |
| 9.61e-36 | FFCP PHASE2:Hg19::chr1:153044083..153044088,-#_e903e9926d62813faf9e3b740e04c7d5 | p1@SPRR2B |
| 1.37e-35 | FFCP PHASE1:Hg19::chr10:102981544..102981563,+#_2b54cb5d10b8e9277870a1b88d25f214 | p@chr10:102981544..102981563, + |
| 1.37e-35 | FFCP PHASE2:Hg19::chr10:102981544..102981563,+#_2b54cb5d10b8e9277870a1b88d25f214 | p@chr10:102981544..102981563, + |
| 4.27e-34 | FFCP PHASE2:Hg19::chr11:86285462..86285463,-#_bc0be71b4c1fd308e7ac227f874a55f9 | p@chr11:86285462..86285463, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr17:38978288..38978293,-#_bc0be71b4c1fd308e7ac227f874a55f9 | p21@KRT10 |
| 4.27e-34 | FFCP PHASE2:Hg19::chr17:38978288..38978293,-#_bc0be71b4c1fd308e7ac227f874a55f9 | p21@KRT10 |
| 4.27e-34 | FFCP PHASE1:Hg19::chr20:3295742..3295749,-#_bc0be71b4c1fd308e7ac227f874a55f9 | p@chr20:3295742..3295749, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr11:27721743..27721753,-#_bc0be71b4c1fd308e7ac227f874a55f9 | p26@BDNF |
| 4.27e-34 | FFCP PHASE1:Hg19::chr11:86285462..86285463,-#_bc0be71b4c1fd308e7ac227f874a55f9 | p@chr11:86285462..86285463, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr17:38975839..38975846,-#_bc0be71b4c1fd308e7ac227f874a55f9 | p14@KRT10 |
| 4.27e-34 | FFCP PHASE2:Hg19::chr20:3295742..3295749,-#_bc0be71b4c1fd308e7ac227f874a55f9 | p@chr20:3295742..3295749, - |
| 4.27e-34 | FFCP PHASE2:Hg19::chr17:38975839..38975846,-#_bc0be71b4c1fd308e7ac227f874a55f9 | p14@KRT10 |
| 4.27e-34 | FFCP PHASE2:Hg19::chr11:27721743..27721753,-#_bc0be71b4c1fd308e7ac227f874a55f9 | p26@BDNF |
| 4.27e-34 | FFCP PHASE1:Hg19::chr17:38977367..38977371,-#_bc0be71b4c1fd308e7ac227f874a55f9 | p@chr17:38977367..38977371, - |
| 4.27e-34 | FFCP PHASE2:Hg19::chr17:38977367..38977371,-#_bc0be71b4c1fd308e7ac227f874a55f9 | p@chr17:38977367..38977371, - |
| 5.37e-34 | FFCP PHASE1:Hg19::chr6:25004775..25004790,-#_3a2a203455ed83669598350bb242f3d1 | p@chr6:25004775..25004790, - |
| 5.37e-34 | FFCP PHASE2:Hg19::chr6:25004775..25004790,-#_3a2a203455ed83669598350bb242f3d1 | p@chr6:25004775..25004790, - |
| 5.37e-34 | FFCP PHASE1:Hg19::chr13:43059605..43059611,+#_3a2a203455ed83669598350bb242f3d1 | p@chr13:43059605..43059611, + |
| 5.37e-34 | FFCP PHASE2:Hg19::chr13:43059605..43059611,+#_3a2a203455ed83669598350bb242f3d1 | p@chr13:43059605..43059611, + |
| 7.51e-34 | FFCP PHASE2:Hg19::chr12:3600112..3600125,+#_b998a0e8888c3f6a382a9b32a41a76ce | p6@PRMT8 |
| 7.51e-34 | FFCP PHASE1:Hg19::chr12:3600112..3600125,+#_b998a0e8888c3f6a382a9b32a41a76ce | p6@PRMT8 |
| 8.35e-34 | FFCP PHASE1:Hg19::chr3:140961094..140961103,+#_6bd6c197b7505ddad95bb5a7baf588ed | p@chr3:140961094..140961103, + |
| 8.35e-34 | FFCP PHASE2:Hg19::chr17:38976882..38976895,-#_6bd6c197b7505ddad95bb5a7baf588ed | p@chr17:38976882..38976895, - |
| 8.35e-34 | FFCP PHASE2:Hg19::chr1:153321274..153321283,-#_6bd6c197b7505ddad95bb5a7baf588ed | p2@PGLYRP4 |
| 8.35e-34 | FFCP PHASE2:Hg19::chr3:140961094..140961103,+#_6bd6c197b7505ddad95bb5a7baf588ed | p@chr3:140961094..140961103, + |
| 8.35e-34 | FFCP PHASE1:Hg19::chr17:38976882..38976895,-#_6bd6c197b7505ddad95bb5a7baf588ed | p@chr17:38976882..38976895, - |
| 8.35e-34 | FFCP PHASE1:Hg19::chr1:153321274..153321283,-#_6bd6c197b7505ddad95bb5a7baf588ed | p2@PGLYRP4 |
| 8.4e-34 | FFCP PHASE1:Hg19::chr17:38976601..38976615,-#_c2d4ce91f0013f7e2dc496d1d4583d21 | p@chr17:38976601..38976615, - |
| 8.4e-34 | FFCP PHASE2:Hg19::chr17:38976601..38976615,-#_c2d4ce91f0013f7e2dc496d1d4583d21 | p@chr17:38976601..38976615, - |
| 9.87e-34 | FFCP PHASE1:Hg19::chrY:7671916..7671924,-#_35f4e4e61b174371a1f808301c28cc87 | p@chrY:7671916..7671924, - |
| 9.87e-34 | FFCP PHASE2:Hg19::chrY:7671916..7671924,-#_35f4e4e61b174371a1f808301c28cc87 | p@chrY:7671916..7671924, - |
| 1.17e-33 | FFCP PHASE1:Hg19::chr17:38978621..38978636,-#_c0a734ee9550fe7ff1a3fa96b7ad9627 | p8@KRT10 |
| 1.17e-33 | FFCP PHASE2:Hg19::chr17:38978621..38978636,-#_c0a734ee9550fe7ff1a3fa96b7ad9627 | p8@KRT10 |
| 1.64e-33 | FFCP PHASE1:Hg19::chr17:38976811..38976823,-#_0c8ccf8c094901e12853b537fb43666c | p@chr17:38976811..38976823, - |
| 1.64e-33 | FFCP PHASE2:Hg19::chr17:38976811..38976823,-#_0c8ccf8c094901e12853b537fb43666c | p@chr17:38976811..38976823, - |
| 3.37e-33 | FFCP PHASE1:Hg19::chr1:152943122..152943128,+#_687e41d533a23052aec8c3ee95d86be1 | p1@SPRR4 |
| 3.37e-33 | FFCP PHASE2:Hg19::chr1:152943122..152943128,+#_687e41d533a23052aec8c3ee95d86be1 | p1@SPRR4 |
| 3.56e-33 | FFCP PHASE1:Hg19::chr17:38984452..38984467,+#_a288742cfff215a070662c68500b0467 | p@chr17:38984452..38984467, + |
| 3.56e-33 | FFCP PHASE2:Hg19::chr17:38984452..38984467,+#_a288742cfff215a070662c68500b0467 | p@chr17:38984452..38984467, + |
| 6.02e-33 | FFCP PHASE1:Hg19::chr2:131669765..131669776,+#_d95a6e594a0e28422b41152a1618afe7 | p@chr2:131669765..131669776, + |
| 6.02e-33 | FFCP PHASE2:Hg19::chr2:131669765..131669776,+#_d95a6e594a0e28422b41152a1618afe7 | p@chr2:131669765..131669776, + |
| 5.0e-32 | FFCP PHASE2:Hg19::chr17:39742637..39742657,-#_9442acaf2035d02024e9aed44da1cc1a | p3@BC127260 |
| 5.0e-32 | FFCP PHASE1:Hg19::chr17:39742637..39742657,-#_9442acaf2035d02024e9aed44da1cc1a | p3@BC127260 |
| 3.17e-31 | FFCP PHASE1:Hg19::chr17:73753308..73753323,+#_e9b5b22b6541631c32b19a3db740648d | p@chr17:73753308..73753323, + |
| 3.17e-31 | FFCP PHASE2:Hg19::chr17:73753308..73753323,+#_e9b5b22b6541631c32b19a3db740648d | p@chr17:73753308..73753323, + |
| 7.02e-31 | FFCP PHASE1:Hg19::chr5:159849211..159849231,+#_976d43c4d421b02b39cc2785dfb25dc8 | p5@PTTG1 |
| 7.02e-31 | FFCP PHASE2:Hg19::chr5:159849211..159849231,+#_976d43c4d421b02b39cc2785dfb25dc8 | p5@PTTG1 |
| 1.38e-30 | FFCP PHASE1:Hg19::chr1:197657822..197657832,+#_ae1f6ffbb6b425ac1c4bb72105f745e2 | p1@EEF1A1P32 |
| 1.38e-30 | FFCP PHASE2:Hg19::chr1:197657822..197657832,+#_ae1f6ffbb6b425ac1c4bb72105f745e2 | p1@EEF1A1P32 |
| 2.04e-30 | FFCP PHASE1:Hg19::chr1:2360073..2360082,+#_3ecef08f20c24684599d4fe8e6224ca2 | p@chr1:2360073..2360082, + |
| 2.04e-30 | FFCP PHASE2:Hg19::chr1:2360073..2360082,+#_3ecef08f20c24684599d4fe8e6224ca2 | p@chr1:2360073..2360082, + |
| 2.28e-30 | FFCP PHASE1:Hg19::chr1:152769195..152769200,+#_ed95ccdd58cb97b2bec969cef7259cc4 | p1@LCE1D |
| 2.28e-30 | FFCP PHASE2:Hg19::chr1:152769195..152769200,+#_ed95ccdd58cb97b2bec969cef7259cc4 | p1@LCE1D |
| 2.78e-30 | FFCP PHASE1:Hg19::chr17:38652332..38652344,-#_903b46a2f5efba531fd5844447751c49 | p18@TNS4 |
| 2.78e-30 | FFCP PHASE2:Hg19::chr17:38652332..38652344,-#_903b46a2f5efba531fd5844447751c49 | p18@TNS4 |
